Protein–RNA interactions for Protein: Q60847

Col12a1, Collagen alpha-1(XII) chain, mousemouse

Predictions only

Length 3,120 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col12a1Q60847 Mir1897-201ENSMUST00000122581 272 ntBASIC14.98□□□□□ -0.01
Col12a1Q60847 1700080E11Rik-202ENSMUST00000190661 682 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
Col12a1Q60847 AC158529.1-201ENSMUST00000223618 239 ntBASIC14.98□□□□□ -0.01
Col12a1Q60847 Cyp4x1os-201ENSMUST00000153951 2003 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
Col12a1Q60847 Ube2z-201ENSMUST00000100528 3997 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Col12a1Q60847 B3gnt6-201ENSMUST00000098278 2371 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Col12a1Q60847 Kctd10-201ENSMUST00000001125 1026 ntAPPRIS ALT1 TSL 5 BASIC14.97□□□□□ -0.01
Col12a1Q60847 Ldha-ps-201ENSMUST00000119390 995 ntBASIC14.97□□□□□ -0.01
Col12a1Q60847 AC154171.1-201ENSMUST00000224610 643 ntBASIC14.97□□□□□ -0.01
Col12a1Q60847 Cnbp-203ENSMUST00000113619 1661 ntAPPRIS P2 TSL 1 (best) BASIC14.97□□□□□ -0.01
Col12a1Q60847 Mettl7a3-201ENSMUST00000075420 1618 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Col12a1Q60847 Pdss2-202ENSMUST00000159139 1467 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
Col12a1Q60847 Clcn2-201ENSMUST00000007207 3128 ntAPPRIS P2 TSL 1 (best) BASIC14.97□□□□□ -0.01
Col12a1Q60847 Agtr1a-201ENSMUST00000066412 2199 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Col12a1Q60847 Dynlt1c-201ENSMUST00000092966 2589 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Col12a1Q60847 1700042O10Rik-201ENSMUST00000151032 1075 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
Col12a1Q60847 Sf3a2-204ENSMUST00000151928 781 ntTSL 5 BASIC14.97□□□□□ -0.01
Col12a1Q60847 Gm32351-201ENSMUST00000220503 438 ntTSL 5 BASIC14.97□□□□□ -0.01
Col12a1Q60847 1700120B22Rik-201ENSMUST00000054837 464 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
Col12a1Q60847 Yipf5-201ENSMUST00000025364 2329 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Col12a1Q60847 Rabggta-201ENSMUST00000062861 2338 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
Col12a1Q60847 Ckap4-201ENSMUST00000053871 3089 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Col12a1Q60847 Asic4-202ENSMUST00000113577 2667 ntAPPRIS ALT2 TSL 5 BASIC14.97□□□□□ -0.01
Col12a1Q60847 Gm27029-201ENSMUST00000107257 1898 ntAPPRIS ALT2 TSL 5 BASIC14.97□□□□□ -0.01
Col12a1Q60847 Ehmt2-202ENSMUST00000078061 3746 ntAPPRIS ALT2 TSL 1 (best) BASIC14.97□□□□□ -0.01
Col12a1Q60847 Gba2-201ENSMUST00000030189 3544 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Col12a1Q60847 Slc29a1-202ENSMUST00000064889 1988 ntAPPRIS P3 TSL 1 (best) BASIC14.97□□□□□ -0.01
Col12a1Q60847 Aaed1-202ENSMUST00000220895 2858 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
Col12a1Q60847 Gm13185-201ENSMUST00000131044 944 ntTSL 3 BASIC14.97□□□□□ -0.01
Col12a1Q60847 Cpne8-201ENSMUST00000014777 697 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
Col12a1Q60847 Gm15406-202ENSMUST00000202229 767 ntTSL 2 BASIC14.97□□□□□ -0.01
Col12a1Q60847 AC238811.3-201ENSMUST00000225422 709 ntBASIC14.97□□□□□ -0.01
Col12a1Q60847 Apol7d-201ENSMUST00000097699 826 ntTSL 2 BASIC14.97□□□□□ -0.01
Col12a1Q60847 Rhot2-201ENSMUST00000043897 3189 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Col12a1Q60847 Slc22a18-202ENSMUST00000105917 1552 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Col12a1Q60847 Gm13337-201ENSMUST00000119183 1594 ntBASIC14.97□□□□□ -0.01
Col12a1Q60847 Dcaf13-201ENSMUST00000022909 1551 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Col12a1Q60847 Dok7-202ENSMUST00000101298 2443 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
Col12a1Q60847 Abhd16b-201ENSMUST00000069649 1775 ntAPPRIS P1 BASIC14.96□□□□□ -0.01
Col12a1Q60847 Sertad4-204ENSMUST00000155579 3350 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Col12a1Q60847 Zdhhc1-203ENSMUST00000212303 2056 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Col12a1Q60847 L2hgdh-201ENSMUST00000021370 3340 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Col12a1Q60847 Wnt2b-201ENSMUST00000029429 3318 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Col12a1Q60847 Cryzl1-204ENSMUST00000122254 845 ntTSL 3 BASIC14.96□□□□□ -0.01
Col12a1Q60847 Snhg9-201ENSMUST00000161706 183 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
Col12a1Q60847 Mroh1-217ENSMUST00000162319 1244 ntAPPRIS ALT2 TSL 5 BASIC14.96□□□□□ -0.01
Col12a1Q60847 Gm28760-201ENSMUST00000185995 736 ntBASIC14.96□□□□□ -0.01
Col12a1Q60847 Gm28511-201ENSMUST00000191594 450 ntTSL 3 BASIC14.96□□□□□ -0.01
Col12a1Q60847 Gm37917-201ENSMUST00000194711 392 ntBASIC14.96□□□□□ -0.01
Col12a1Q60847 Olfr1412-201ENSMUST00000062964 966 ntAPPRIS P1 BASIC14.96□□□□□ -0.01
Col12a1Q60847 Ifitm10-202ENSMUST00000084412 1158 ntAPPRIS ALT2 TSL 1 (best) BASIC14.96□□□□□ -0.01
Col12a1Q60847 Il9r-202ENSMUST00000128311 1757 ntAPPRIS ALT2 TSL 1 (best) BASIC14.96□□□□□ -0.01
Col12a1Q60847 Gm13327-201ENSMUST00000133391 2741 ntTSL 5 BASIC14.96□□□□□ -0.01
Col12a1Q60847 Sbk2-202ENSMUST00000182214 2236 ntAPPRIS P1 TSL 5 BASIC14.96□□□□□ -0.01
Col12a1Q60847 Erich6-201ENSMUST00000041115 2195 ntAPPRIS P1 TSL 5 BASIC14.96□□□□□ -0.01
Col12a1Q60847 Alx1-208ENSMUST00000219194 1695 ntAPPRIS P1 TSL 5 BASIC14.96□□□□□ -0.01
Col12a1Q60847 Dsn1-201ENSMUST00000103129 2080 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Col12a1Q60847 Gm9002-201ENSMUST00000178437 499 ntBASIC14.96□□□□□ -0.02
Col12a1Q60847 Gm9522-201ENSMUST00000182394 926 ntBASIC14.96□□□□□ -0.02
Col12a1Q60847 Gm43714-201ENSMUST00000198351 1204 ntTSL 1 (best) BASIC14.96□□□□□ -0.02
Col12a1Q60847 Slc35c2-201ENSMUST00000017808 1843 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.02
Col12a1Q60847 Pou2f3-202ENSMUST00000176636 2522 ntAPPRIS P2 TSL 1 (best) BASIC14.96□□□□□ -0.02
Col12a1Q60847 Teddm2-202ENSMUST00000123490 1851 ntAPPRIS ALT2 TSL 1 (best) BASIC14.95□□□□□ -0.02
Col12a1Q60847 Hsd3b3-201ENSMUST00000090743 1492 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Col12a1Q60847 Tssc4-202ENSMUST00000105920 895 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
Col12a1Q60847 Boll-202ENSMUST00000114423 1106 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
Col12a1Q60847 Rps19-ps13-201ENSMUST00000180504 441 ntBASIC14.95□□□□□ -0.02
Col12a1Q60847 Vrk3-201ENSMUST00000002275 1969 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Col12a1Q60847 Gm26688-201ENSMUST00000181176 1568 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
Col12a1Q60847 Zfp385b-202ENSMUST00000111829 2073 ntTSL 5 BASIC14.95□□□□□ -0.02
Col12a1Q60847 Spdef-205ENSMUST00000167489 1708 ntAPPRIS P1 TSL 5 BASIC14.95□□□□□ -0.02
Col12a1Q60847 Ddx59-201ENSMUST00000027655 2166 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Col12a1Q60847 Hps4-201ENSMUST00000035279 2836 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Col12a1Q60847 Gm15317-201ENSMUST00000129569 699 ntTSL 3 BASIC14.95□□□□□ -0.02
Col12a1Q60847 Snu13-203ENSMUST00000166578 1061 ntTSL 2 BASIC14.95□□□□□ -0.02
Col12a1Q60847 Inpp4a-213ENSMUST00000193774 1243 ntTSL 5 BASIC14.95□□□□□ -0.02
Col12a1Q60847 Sesn3-207ENSMUST00000209187 1700 ntTSL 5 BASIC14.95□□□□□ -0.02
Col12a1Q60847 Emp2-201ENSMUST00000078357 3440 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Col12a1Q60847 Gm10532-201ENSMUST00000181913 2301 ntTSL 2 BASIC14.95□□□□□ -0.02
Col12a1Q60847 Gm13589-201ENSMUST00000146404 1675 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
Col12a1Q60847 Tnfrsf13c-202ENSMUST00000109535 1983 ntAPPRIS ALT2 TSL 1 (best) BASIC14.95□□□□□ -0.02
Col12a1Q60847 Gpr20-201ENSMUST00000064166 2144 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Col12a1Q60847 H2-Q4-201ENSMUST00000081435 1793 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Col12a1Q60847 AC114008.2-201ENSMUST00000227699 1347 ntBASIC14.95□□□□□ -0.02
Col12a1Q60847 Nadk2-203ENSMUST00000100790 3665 ntAPPRIS ALT2 TSL 5 BASIC14.95□□□□□ -0.02
Col12a1Q60847 3110082I17Rik-204ENSMUST00000198474 2030 ntTSL 2 BASIC14.95□□□□□ -0.02
Col12a1Q60847 Tnni2-206ENSMUST00000149529 768 ntAPPRIS P1 TSL 2 BASIC14.95□□□□□ -0.02
Col12a1Q60847 Gm17420-201ENSMUST00000164753 153 ntBASIC14.95□□□□□ -0.02
Col12a1Q60847 AC159474.1-201ENSMUST00000218454 374 ntTSL 3 BASIC14.95□□□□□ -0.02
Col12a1Q60847 4930518P08Rik-201ENSMUST00000221281 1187 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
Col12a1Q60847 Vps25-202ENSMUST00000042477 1106 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Col12a1Q60847 Gm8399-201ENSMUST00000082300 1117 ntBASIC14.95□□□□□ -0.02
Col12a1Q60847 Map6-207ENSMUST00000208924 2906 ntAPPRIS ALT2 TSL 1 (best) BASIC14.94□□□□□ -0.02
Col12a1Q60847 Mterf4-202ENSMUST00000112942 1525 ntTSL 2 BASIC14.94□□□□□ -0.02
Col12a1Q60847 Rhot1-201ENSMUST00000017831 3029 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
Col12a1Q60847 Ewsr1-202ENSMUST00000073308 2269 ntAPPRIS ALT2 TSL 1 (best) BASIC14.94□□□□□ -0.02
Col12a1Q60847 Gm11661-201ENSMUST00000121761 1327 ntBASIC14.94□□□□□ -0.02
Col12a1Q60847 Taf6l-206ENSMUST00000176610 2203 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Col12a1Q60847 Opn4-202ENSMUST00000168444 2075 ntAPPRIS ALT2 TSL 1 (best) BASIC14.94□□□□□ -0.02
Col12a1Q60847 Mmgt2-207ENSMUST00000155759 589 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Retrieved 100 of 76,532 protein–RNA pairs in 36.5 ms