Protein–RNA interactions for Protein: Q60769

Tnfaip3, Tumor necrosis factor alpha-induced protein 3, mousemouse

Predictions only

Length 775 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tnfaip3Q60769 Gm4899-201ENSMUST00000178708 719 ntBASIC14.44□□□□□ -0.1
Tnfaip3Q60769 Rpsa-ps1-201ENSMUST00000191040 886 ntBASIC14.44□□□□□ -0.1
Tnfaip3Q60769 Gchfr-201ENSMUST00000057454 645 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Tnfaip3Q60769 Nudt3-202ENSMUST00000062397 558 ntTSL 3 BASIC14.44□□□□□ -0.1
Tnfaip3Q60769 Ndufs8-201ENSMUST00000075092 963 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Tnfaip3Q60769 Chchd2-201ENSMUST00000094280 915 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Tnfaip3Q60769 Ndufv1-201ENSMUST00000042497 1661 ntAPPRIS P2 TSL 1 (best) BASIC14.44□□□□□ -0.1
Tnfaip3Q60769 Pacs1-201ENSMUST00000025786 4339 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Tnfaip3Q60769 C2cd2-201ENSMUST00000170757 6555 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Tnfaip3Q60769 Nlk-201ENSMUST00000142739 4444 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Tnfaip3Q60769 Pax8-201ENSMUST00000028355 2560 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Tnfaip3Q60769 Prnp-201ENSMUST00000091288 2184 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Tnfaip3Q60769 Sgcd-201ENSMUST00000077221 1617 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Tnfaip3Q60769 A4galt-202ENSMUST00000164614 2128 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Tnfaip3Q60769 Gdf3-201ENSMUST00000032211 2125 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Tnfaip3Q60769 Plekha8-202ENSMUST00000119706 6739 ntAPPRIS P1 TSL 2 BASIC14.44□□□□□ -0.1
Tnfaip3Q60769 Capn1-201ENSMUST00000025891 3100 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Tnfaip3Q60769 Mindy4-203ENSMUST00000204842 2211 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
Tnfaip3Q60769 Jakmip1-202ENSMUST00000121010 2496 ntTSL 5 BASIC14.43□□□□□ -0.1
Tnfaip3Q60769 Itgb4-201ENSMUST00000021107 6014 ntAPPRIS P2 TSL 5 BASIC14.43□□□□□ -0.1
Tnfaip3Q60769 Ssu2-201ENSMUST00000060847 1321 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Tnfaip3Q60769 Reep4-201ENSMUST00000047218 1565 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Tnfaip3Q60769 Oas1b-201ENSMUST00000086377 1832 ntTSL 5 BASIC14.43□□□□□ -0.1
Tnfaip3Q60769 Zfp800-202ENSMUST00000115320 4311 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Tnfaip3Q60769 Ppfia3-207ENSMUST00000211067 4565 ntAPPRIS P1 TSL 5 BASIC14.43□□□□□ -0.1
Tnfaip3Q60769 Hr-201ENSMUST00000022691 5487 ntAPPRIS P2 TSL 1 (best) BASIC14.43□□□□□ -0.1
Tnfaip3Q60769 Stard7-201ENSMUST00000110374 1530 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
Tnfaip3Q60769 Trmu-201ENSMUST00000023019 1526 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Tnfaip3Q60769 Rhd-201ENSMUST00000030627 1514 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Tnfaip3Q60769 1110004F10Rik-203ENSMUST00000106608 927 ntTSL 3 BASIC14.43□□□□□ -0.1
Tnfaip3Q60769 Gm11906-201ENSMUST00000124792 680 ntTSL 5 BASIC14.43□□□□□ -0.1
Tnfaip3Q60769 Slc38a6-204ENSMUST00000126488 589 ntTSL 5 BASIC14.43□□□□□ -0.1
Tnfaip3Q60769 Pcp2-205ENSMUST00000142431 524 ntTSL 2 BASIC14.43□□□□□ -0.1
Tnfaip3Q60769 Triqk-201ENSMUST00000143186 888 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Tnfaip3Q60769 A230065H16Rik-201ENSMUST00000150384 670 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Tnfaip3Q60769 Hsf4-203ENSMUST00000172525 1276 ntTSL 5 BASIC14.43□□□□□ -0.1
Tnfaip3Q60769 Gm20496-202ENSMUST00000173770 523 ntTSL 5 BASIC14.43□□□□□ -0.1
Tnfaip3Q60769 Gm30097-202ENSMUST00000194580 329 ntTSL 3 BASIC14.43□□□□□ -0.1
Tnfaip3Q60769 AC160980.1-201ENSMUST00000224136 970 ntBASIC14.43□□□□□ -0.1
Tnfaip3Q60769 AC147366.1-201ENSMUST00000227671 852 ntBASIC14.43□□□□□ -0.1
Tnfaip3Q60769 Kcnk16-201ENSMUST00000024155 916 ntAPPRIS P1 TSL 5 BASIC14.43□□□□□ -0.1
Tnfaip3Q60769 Cda-201ENSMUST00000030535 846 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Tnfaip3Q60769 Men1-201ENSMUST00000056391 2975 ntAPPRIS P2 TSL 1 (best) BASIC14.43□□□□□ -0.1
Tnfaip3Q60769 Spdya-204ENSMUST00000167641 1891 ntAPPRIS P1 TSL 5 BASIC14.43□□□□□ -0.1
Tnfaip3Q60769 R74862-202ENSMUST00000133630 2482 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
Tnfaip3Q60769 Prmt6-203ENSMUST00000190378 3051 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Tnfaip3Q60769 Itga5-201ENSMUST00000023128 4382 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Tnfaip3Q60769 Galnt6os-201ENSMUST00000160960 1389 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
Tnfaip3Q60769 Fmnl3-201ENSMUST00000081224 4137 ntAPPRIS ALT2 TSL 1 (best) BASIC14.43□□□□□ -0.1
Tnfaip3Q60769 Fam214b-204ENSMUST00000107958 3280 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Tnfaip3Q60769 R3hcc1-201ENSMUST00000118374 1726 ntAPPRIS ALT2 TSL 1 (best) BASIC14.43□□□□□ -0.1
Tnfaip3Q60769 9430015G10Rik-208ENSMUST00000169550 2660 ntAPPRIS P1 TSL 5 BASIC14.43□□□□□ -0.1
Tnfaip3Q60769 Sacs-204ENSMUST00000121091 4581 ntAPPRIS ALT2 TSL 1 (best) BASIC14.43□□□□□ -0.1
Tnfaip3Q60769 Rnf138-202ENSMUST00000072847 3002 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
Tnfaip3Q60769 Dctd-203ENSMUST00000170263 2096 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Tnfaip3Q60769 Dffb-201ENSMUST00000030893 2093 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Tnfaip3Q60769 Mrps2-201ENSMUST00000038600 2080 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Tnfaip3Q60769 Chrm3-202ENSMUST00000187510 4336 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Tnfaip3Q60769 Grk6-207ENSMUST00000225925 2769 ntBASIC14.43□□□□□ -0.1
Tnfaip3Q60769 Gps1-202ENSMUST00000116305 1827 ntAPPRIS P2 TSL 1 (best) BASIC14.43□□□□□ -0.1
Tnfaip3Q60769 Papola-202ENSMUST00000109901 4380 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Tnfaip3Q60769 Fdft1-204ENSMUST00000224625 3698 ntAPPRIS P1 BASIC14.43□□□□□ -0.1
Tnfaip3Q60769 Podn-203ENSMUST00000106709 3170 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Tnfaip3Q60769 Sfxn4-203ENSMUST00000135808 1309 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Tnfaip3Q60769 Nefh-201ENSMUST00000093369 3994 ntAPPRIS P1 TSL 2 BASIC14.42□□□□□ -0.1
Tnfaip3Q60769 Mis18a-201ENSMUST00000099554 1333 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Tnfaip3Q60769 Ggn-204ENSMUST00000208330 2205 ntAPPRIS ALT2 TSL 5 BASIC14.42□□□□□ -0.1
Tnfaip3Q60769 Zbtb11-201ENSMUST00000050248 4920 ntAPPRIS P1 TSL 5 BASIC14.42□□□□□ -0.1
Tnfaip3Q60769 Mycbpap-201ENSMUST00000040692 1512 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
Tnfaip3Q60769 5730480H06Rik-205ENSMUST00000196950 3300 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Tnfaip3Q60769 Tdg-201ENSMUST00000092266 2959 ntAPPRIS ALT2 TSL 1 (best) BASIC14.42□□□□□ -0.1
Tnfaip3Q60769 Mettl16-201ENSMUST00000010698 2073 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
Tnfaip3Q60769 Tnip2-203ENSMUST00000114359 1642 ntTSL 5 BASIC14.42□□□□□ -0.1
Tnfaip3Q60769 Rmdn1-201ENSMUST00000029888 1734 ntAPPRIS P2 TSL 1 (best) BASIC14.42□□□□□ -0.1
Tnfaip3Q60769 Thap7-201ENSMUST00000100125 1248 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Tnfaip3Q60769 Higd1b-202ENSMUST00000107072 497 ntAPPRIS P1 TSL 5 BASIC14.42□□□□□ -0.1
Tnfaip3Q60769 Higd1b-203ENSMUST00000107073 530 ntAPPRIS P1 TSL 2 BASIC14.42□□□□□ -0.1
Tnfaip3Q60769 Gm11779-201ENSMUST00000118541 368 ntBASIC14.42□□□□□ -0.1
Tnfaip3Q60769 Gm15467-201ENSMUST00000120582 445 ntBASIC14.42□□□□□ -0.1
Tnfaip3Q60769 Gm12260-201ENSMUST00000122447 411 ntBASIC14.42□□□□□ -0.1
Tnfaip3Q60769 9130204K15Rik-201ENSMUST00000131441 867 ntTSL 5 BASIC14.42□□□□□ -0.1
Tnfaip3Q60769 Timm9-202ENSMUST00000166120 990 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Tnfaip3Q60769 Caly-202ENSMUST00000166758 1220 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Tnfaip3Q60769 1600014C10Rik-209ENSMUST00000179992 568 ntTSL 3 BASIC14.42□□□□□ -0.1
Tnfaip3Q60769 Gm26756-201ENSMUST00000181689 1294 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
Tnfaip3Q60769 Higd1b-201ENSMUST00000021302 735 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Tnfaip3Q60769 Timm9-205ENSMUST00000221178 529 ntTSL 3 BASIC14.42□□□□□ -0.1
Tnfaip3Q60769 Timm9-207ENSMUST00000221559 718 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Tnfaip3Q60769 Timm9-209ENSMUST00000221815 1193 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
Tnfaip3Q60769 1700037H04Rik-201ENSMUST00000028800 832 ntAPPRIS ALT1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Tnfaip3Q60769 Tamm41-201ENSMUST00000032461 1168 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Tnfaip3Q60769 Gnptg-201ENSMUST00000038973 1234 ntAPPRIS P2 TSL 1 (best) BASIC14.42□□□□□ -0.1
Tnfaip3Q60769 BC031181-201ENSMUST00000040284 1047 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Tnfaip3Q60769 Dnph1-201ENSMUST00000046497 1106 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Tnfaip3Q60769 Shpk-201ENSMUST00000006105 2808 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Tnfaip3Q60769 Adgrb2-205ENSMUST00000106017 5104 ntAPPRIS P3 TSL 1 (best) BASIC14.42□□□□□ -0.1
Tnfaip3Q60769 Best4-ps-201ENSMUST00000129783 1380 ntBASIC14.42□□□□□ -0.1
Tnfaip3Q60769 Rcn2-201ENSMUST00000114276 2024 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Tnfaip3Q60769 Insig1-201ENSMUST00000059155 2697 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Tnfaip3Q60769 Fam169b-201ENSMUST00000098378 2776 ntTSL 5 BASIC14.42□□□□□ -0.1
Retrieved 100 of 76,532 protein–RNA pairs in 34.8 ms