Protein–RNA interactions for Protein: Q5R1I3

Trav7-2, T cell receptor alpha variable 7-2 (Fragment), mousemouse

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav7-2Q5R1I3 Tgfa-201ENSMUST00000032066 4527 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Trav7-2Q5R1I3 Synj1-203ENSMUST00000121759 7090 ntAPPRIS P4 TSL 5 BASIC11.47□□□□□ -0.57
Trav7-2Q5R1I3 Ramp2-204ENSMUST00000129680 1178 ntAPPRIS P2 TSL 1 (best) BASIC11.47□□□□□ -0.57
Trav7-2Q5R1I3 Sec61g-206ENSMUST00000166950 754 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
Trav7-2Q5R1I3 Sec61g-207ENSMUST00000178855 779 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Trav7-2Q5R1I3 Mir6404-201ENSMUST00000183699 94 ntBASIC11.47□□□□□ -0.57
Trav7-2Q5R1I3 3830406C13Rik-207ENSMUST00000223927 1010 ntBASIC11.47□□□□□ -0.57
Trav7-2Q5R1I3 Ndufb8-201ENSMUST00000026222 680 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Trav7-2Q5R1I3 Hist1h2af-201ENSMUST00000073261 399 ntAPPRIS P1 BASIC11.47□□□□□ -0.57
Trav7-2Q5R1I3 Il6ra-202ENSMUST00000197679 8639 ntAPPRIS ALT2 TSL 1 (best) BASIC11.47□□□□□ -0.57
Trav7-2Q5R1I3 Brd7-201ENSMUST00000034085 3625 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Trav7-2Q5R1I3 Ahdc1-202ENSMUST00000105914 5898 ntAPPRIS P1 TSL 5 BASIC11.47□□□□□ -0.57
Trav7-2Q5R1I3 Bicc1-201ENSMUST00000014473 3231 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
Trav7-2Q5R1I3 Zfp184-202ENSMUST00000102978 3198 ntAPPRIS P1 TSL 5 BASIC11.47□□□□□ -0.57
Trav7-2Q5R1I3 Rabggta-205ENSMUST00000227061 2882 ntAPPRIS P1 BASIC11.47□□□□□ -0.57
Trav7-2Q5R1I3 Sf1-203ENSMUST00000113488 2282 ntTSL 5 BASIC11.47□□□□□ -0.57
Trav7-2Q5R1I3 Akap1-201ENSMUST00000018572 3758 ntAPPRIS P2 TSL 1 (best) BASIC11.47□□□□□ -0.57
Trav7-2Q5R1I3 Slc8a2-202ENSMUST00000211649 5261 ntAPPRIS P3 TSL 1 (best) BASIC11.47□□□□□ -0.57
Trav7-2Q5R1I3 Syt12-201ENSMUST00000059295 3581 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Trav7-2Q5R1I3 Mrap2-203ENSMUST00000179313 2039 ntAPPRIS P1 TSL 2 BASIC11.47□□□□□ -0.57
Trav7-2Q5R1I3 Lrp11-201ENSMUST00000019931 3386 ntAPPRIS P2 TSL 1 (best) BASIC11.47□□□□□ -0.57
Trav7-2Q5R1I3 Aspm-205ENSMUST00000200083 6072 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
Trav7-2Q5R1I3 Snx2-201ENSMUST00000037850 2013 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Trav7-2Q5R1I3 Slc4a4-207ENSMUST00000148750 7931 ntAPPRIS P3 TSL 5 BASIC11.46□□□□□ -0.57
Trav7-2Q5R1I3 Syt17-204ENSMUST00000203796 2957 ntAPPRIS ALT2 TSL 1 (best) BASIC11.46□□□□□ -0.57
Trav7-2Q5R1I3 Gck-202ENSMUST00000109822 1786 ntTSL 1 (best) BASIC11.46□□□□□ -0.57
Trav7-2Q5R1I3 Amz2-202ENSMUST00000092500 2816 ntAPPRIS P2 TSL 1 (best) BASIC11.46□□□□□ -0.57
Trav7-2Q5R1I3 Nfatc1-204ENSMUST00000170905 4896 ntAPPRIS ALT2 TSL 1 (best) BASIC11.46□□□□□ -0.57
Trav7-2Q5R1I3 Tnn-201ENSMUST00000039178 5817 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
Trav7-2Q5R1I3 Snx19-201ENSMUST00000164099 5762 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
Trav7-2Q5R1I3 Dock1-206ENSMUST00000211593 2589 ntTSL 1 (best) BASIC11.46□□□□□ -0.57
Trav7-2Q5R1I3 Cfap20-208ENSMUST00000213086 2544 ntTSL 2 BASIC11.46□□□□□ -0.57
Trav7-2Q5R1I3 Ndufaf3-201ENSMUST00000074208 1487 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
Trav7-2Q5R1I3 Setd1b-204ENSMUST00000163030 8857 ntAPPRIS P2 TSL 5 BASIC11.46□□□□□ -0.57
Trav7-2Q5R1I3 Pofut1-203ENSMUST00000099192 1385 ntTSL 1 (best) BASIC11.46□□□□□ -0.57
Trav7-2Q5R1I3 Edem2-201ENSMUST00000040833 2290 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
Trav7-2Q5R1I3 Pam-201ENSMUST00000058762 4095 ntAPPRIS ALT2 TSL 1 (best) BASIC11.46□□□□□ -0.57
Trav7-2Q5R1I3 Fam159b-201ENSMUST00000043061 1310 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
Trav7-2Q5R1I3 Gypc-203ENSMUST00000174459 2180 ntAPPRIS P3 TSL 1 (best) BASIC11.46□□□□□ -0.57
Trav7-2Q5R1I3 Selenoh-201ENSMUST00000102646 783 ntAPPRIS P2 TSL 1 (best) BASIC11.46□□□□□ -0.57
Trav7-2Q5R1I3 Tpm2-203ENSMUST00000107914 1164 ntAPPRIS ALT1 TSL 1 (best) BASIC11.46□□□□□ -0.57
Trav7-2Q5R1I3 Mis18bp1-202ENSMUST00000124201 717 ntTSL 3 BASIC11.46□□□□□ -0.57
Trav7-2Q5R1I3 Zfp133-ps-202ENSMUST00000124788 1079 ntTSL 1 (best) BASIC11.46□□□□□ -0.57
Trav7-2Q5R1I3 Pafah1b3-207ENSMUST00000155118 679 ntTSL 1 (best) BASIC11.46□□□□□ -0.57
Trav7-2Q5R1I3 AC153794.1-201ENSMUST00000169148 126 ntBASIC11.46□□□□□ -0.57
Trav7-2Q5R1I3 Mrps12-204ENSMUST00000171183 883 ntAPPRIS P1 TSL 2 BASIC11.46□□□□□ -0.57
Trav7-2Q5R1I3 Mir3081-201ENSMUST00000175305 84 ntBASIC11.46□□□□□ -0.57
Trav7-2Q5R1I3 Gm26887-201ENSMUST00000181282 547 ntTSL 5 BASIC11.46□□□□□ -0.57
Trav7-2Q5R1I3 Selenoh-206ENSMUST00000189988 390 ntTSL 3 BASIC11.46□□□□□ -0.57
Trav7-2Q5R1I3 Ifi27l2b-201ENSMUST00000044687 1093 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
Trav7-2Q5R1I3 B4galt7-201ENSMUST00000064701 2130 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
Trav7-2Q5R1I3 Lce1a1-201ENSMUST00000074142 705 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
Trav7-2Q5R1I3 S100a16-202ENSMUST00000098911 1127 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
Trav7-2Q5R1I3 Snx17-201ENSMUST00000031029 2018 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
Trav7-2Q5R1I3 Irf3-201ENSMUST00000003284 2031 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
Trav7-2Q5R1I3 Dhx34-203ENSMUST00000119102 4310 ntAPPRIS ALT2 TSL 5 BASIC11.46□□□□□ -0.58
Trav7-2Q5R1I3 Snph-204ENSMUST00000109877 3367 ntAPPRIS ALT2 TSL 1 (best) BASIC11.46□□□□□ -0.58
Trav7-2Q5R1I3 Poli-201ENSMUST00000043286 2591 ntTSL 1 (best) BASIC11.46□□□□□ -0.58
Trav7-2Q5R1I3 Rbfox2-206ENSMUST00000227314 1810 ntBASIC11.46□□□□□ -0.58
Trav7-2Q5R1I3 Steap2-202ENSMUST00000115424 3285 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.58
Trav7-2Q5R1I3 Lmcd1-201ENSMUST00000032376 1730 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.58
Trav7-2Q5R1I3 Gm45277-201ENSMUST00000210549 1695 ntTSL 1 (best) BASIC11.46□□□□□ -0.58
Trav7-2Q5R1I3 Tbrg4-212ENSMUST00000189268 2347 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.58
Trav7-2Q5R1I3 Dagla-201ENSMUST00000039327 5634 ntAPPRIS P1 TSL 5 BASIC11.46□□□□□ -0.58
Trav7-2Q5R1I3 Ss18-203ENSMUST00000092041 2997 ntAPPRIS ALT1 TSL 1 (best) BASIC11.46□□□□□ -0.58
Trav7-2Q5R1I3 Scamp1-201ENSMUST00000022197 4259 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.58
Trav7-2Q5R1I3 Scap-201ENSMUST00000098350 4227 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.58
Trav7-2Q5R1I3 App-207ENSMUST00000227737 2827 ntBASIC11.45□□□□□ -0.58
Trav7-2Q5R1I3 Tprn-201ENSMUST00000114336 2787 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Trav7-2Q5R1I3 1700034H15Rik-202ENSMUST00000139827 4354 ntTSL 5 BASIC11.45□□□□□ -0.58
Trav7-2Q5R1I3 4933436I20Rik-201ENSMUST00000189405 1434 ntTSL 1 (best) BASIC11.45□□□□□ -0.58
Trav7-2Q5R1I3 Vwa5b2-203ENSMUST00000100074 2512 ntAPPRIS P3 TSL 1 (best) BASIC11.45□□□□□ -0.58
Trav7-2Q5R1I3 Mir124-2hg-202ENSMUST00000186746 1368 ntTSL 1 (best) BASIC11.45□□□□□ -0.58
Trav7-2Q5R1I3 Zfp36-202ENSMUST00000209061 2465 ntAPPRIS ALT2 BASIC11.45□□□□□ -0.58
Trav7-2Q5R1I3 Hspb6-201ENSMUST00000044048 1363 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Trav7-2Q5R1I3 Cnksr3-201ENSMUST00000015346 3447 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Trav7-2Q5R1I3 Myo9b-201ENSMUST00000071935 7082 ntAPPRIS P3 TSL 5 BASIC11.45□□□□□ -0.58
Trav7-2Q5R1I3 Ncf1-205ENSMUST00000144086 2882 ntTSL 2 BASIC11.45□□□□□ -0.58
Trav7-2Q5R1I3 Klk12-202ENSMUST00000107970 1115 ntAPPRIS P1 TSL 5 BASIC11.45□□□□□ -0.58
Trav7-2Q5R1I3 Gm12781-201ENSMUST00000146269 395 ntTSL 1 (best) BASIC11.45□□□□□ -0.58
Trav7-2Q5R1I3 Gm1818-201ENSMUST00000169406 1184 ntBASIC11.45□□□□□ -0.58
Trav7-2Q5R1I3 Gm7507-201ENSMUST00000183053 1008 ntBASIC11.45□□□□□ -0.58
Trav7-2Q5R1I3 Gm27357-201ENSMUST00000183754 135 ntBASIC11.45□□□□□ -0.58
Trav7-2Q5R1I3 Ak6-201ENSMUST00000022135 1298 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Trav7-2Q5R1I3 Snhg10-202ENSMUST00000222812 527 ntTSL 1 (best) BASIC11.45□□□□□ -0.58
Trav7-2Q5R1I3 AC154471.1-201ENSMUST00000224418 436 ntBASIC11.45□□□□□ -0.58
Trav7-2Q5R1I3 Otx2os1-206ENSMUST00000228153 787 ntBASIC11.45□□□□□ -0.58
Trav7-2Q5R1I3 Upk3a-201ENSMUST00000023070 1106 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Trav7-2Q5R1I3 Etfb-201ENSMUST00000004729 893 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Trav7-2Q5R1I3 Pla2g12b-201ENSMUST00000009790 1091 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Trav7-2Q5R1I3 Slc22a16-202ENSMUST00000078314 2269 ntAPPRIS P2 TSL 1 (best) BASIC11.45□□□□□ -0.58
Trav7-2Q5R1I3 Wnt10b-206ENSMUST00000228546 2709 ntBASIC11.45□□□□□ -0.58
Trav7-2Q5R1I3 Bpifb3-202ENSMUST00000109760 1741 ntAPPRIS P1 TSL 5 BASIC11.45□□□□□ -0.58
Trav7-2Q5R1I3 Rest-202ENSMUST00000113449 6924 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Trav7-2Q5R1I3 Fam155a-206ENSMUST00000208933 1569 ntAPPRIS ALT2 TSL 1 (best) BASIC11.45□□□□□ -0.58
Trav7-2Q5R1I3 Tmem184b-201ENSMUST00000074991 3361 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Trav7-2Q5R1I3 Pard3-202ENSMUST00000079777 3394 ntTSL 5 BASIC11.45□□□□□ -0.58
Trav7-2Q5R1I3 Fgfr1op2-204ENSMUST00000111663 2880 ntTSL 1 (best) BASIC11.45□□□□□ -0.58
Trav7-2Q5R1I3 Erg-207ENSMUST00000171646 1519 ntTSL 1 (best) BASIC11.45□□□□□ -0.58
Trav7-2Q5R1I3 Mtcl1-211ENSMUST00000177034 5441 ntAPPRIS ALT2 TSL 5 BASIC11.45□□□□□ -0.58
Retrieved 100 of 76,532 protein–RNA pairs in 63.3 ms