Protein–RNA interactions for Protein: Q5R1H8

Trav8d-1, T cell receptor alpha variable 8D-1 (Fragment), mousemouse

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav8d-1Q5R1H8 Ints3-203ENSMUST00000196530 3778 ntAPPRIS ALT2 TSL 1 (best) BASIC12.62□□□□□ -0.39
Trav8d-1Q5R1H8 4930512B01Rik-201ENSMUST00000021378 1856 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Trav8d-1Q5R1H8 Ube2d2b-201ENSMUST00000072578 1678 ntAPPRIS P1 BASIC12.62□□□□□ -0.39
Trav8d-1Q5R1H8 2810408A11Rik-204ENSMUST00000108621 1455 ntAPPRIS ALT2 TSL 5 BASIC12.62□□□□□ -0.39
Trav8d-1Q5R1H8 Gm13186-201ENSMUST00000118031 316 ntBASIC12.62□□□□□ -0.39
Trav8d-1Q5R1H8 Bvht-202ENSMUST00000183087 588 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Trav8d-1Q5R1H8 A430033K04Rik-204ENSMUST00000200521 1110 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Trav8d-1Q5R1H8 Ndufs7-201ENSMUST00000020361 758 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Trav8d-1Q5R1H8 Gm5587-201ENSMUST00000206270 674 ntBASIC12.62□□□□□ -0.39
Trav8d-1Q5R1H8 Mrpl36-203ENSMUST00000222030 680 ntAPPRIS P1 TSL 3 BASIC12.62□□□□□ -0.39
Trav8d-1Q5R1H8 A430033K04Rik-201ENSMUST00000032590 1109 ntTSL 5 BASIC12.62□□□□□ -0.39
Trav8d-1Q5R1H8 Cdkn2c-201ENSMUST00000063531 1106 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Trav8d-1Q5R1H8 Patz1-201ENSMUST00000057089 3118 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Trav8d-1Q5R1H8 Rnf11-201ENSMUST00000030284 4061 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Trav8d-1Q5R1H8 Hexb-201ENSMUST00000022169 1905 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Trav8d-1Q5R1H8 Elmsan1-202ENSMUST00000110294 7156 ntAPPRIS P1 TSL 5 BASIC12.62□□□□□ -0.39
Trav8d-1Q5R1H8 Bpifb5-201ENSMUST00000045959 1637 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Trav8d-1Q5R1H8 Plod2-201ENSMUST00000070522 3649 ntAPPRIS P3 TSL 1 (best) BASIC12.62□□□□□ -0.39
Trav8d-1Q5R1H8 Zfp410-201ENSMUST00000045931 2597 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Trav8d-1Q5R1H8 Vcan-205ENSMUST00000159337 2273 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Trav8d-1Q5R1H8 Mybl1-201ENSMUST00000088658 4980 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Trav8d-1Q5R1H8 9130024F11Rik-202ENSMUST00000185204 2628 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Trav8d-1Q5R1H8 Gm4793-201ENSMUST00000067468 2616 ntTSL 2 BASIC12.61□□□□□ -0.39
Trav8d-1Q5R1H8 Ss18-203ENSMUST00000092041 2997 ntAPPRIS ALT1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Trav8d-1Q5R1H8 Itga8-201ENSMUST00000028106 5812 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Trav8d-1Q5R1H8 Glyr1-202ENSMUST00000115844 3348 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Trav8d-1Q5R1H8 Glyr1-201ENSMUST00000023189 3330 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Trav8d-1Q5R1H8 Gm26627-201ENSMUST00000181540 1487 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Trav8d-1Q5R1H8 Wdr55-201ENSMUST00000049323 1498 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Trav8d-1Q5R1H8 Gm43697-201ENSMUST00000199637 2581 ntBASIC12.61□□□□□ -0.39
Trav8d-1Q5R1H8 Scap-201ENSMUST00000098350 4227 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Trav8d-1Q5R1H8 Nfasc-208ENSMUST00000188307 3049 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Trav8d-1Q5R1H8 Gm9774-202ENSMUST00000192538 1392 ntAPPRIS P1 BASIC12.61□□□□□ -0.39
Trav8d-1Q5R1H8 Slc4a5-202ENSMUST00000113899 5039 ntAPPRIS ALT2 TSL 5 BASIC12.61□□□□□ -0.39
Trav8d-1Q5R1H8 Ruvbl2-201ENSMUST00000107771 1834 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Trav8d-1Q5R1H8 Myh14-201ENSMUST00000048102 6457 ntAPPRIS ALT2 TSL 1 (best) BASIC12.61□□□□□ -0.39
Trav8d-1Q5R1H8 Gm5091-201ENSMUST00000181658 1179 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Trav8d-1Q5R1H8 AL731706.1-201ENSMUST00000227806 944 ntAPPRIS ALT2 BASIC12.61□□□□□ -0.39
Trav8d-1Q5R1H8 Metrn-201ENSMUST00000002344 987 ntAPPRIS P1 TSL 5 BASIC12.61□□□□□ -0.39
Trav8d-1Q5R1H8 Snrnp35-201ENSMUST00000031349 1115 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Trav8d-1Q5R1H8 Ptcra-201ENSMUST00000041012 1283 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Trav8d-1Q5R1H8 Eif1b-201ENSMUST00000007139 1035 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Trav8d-1Q5R1H8 Mff-211ENSMUST00000161648 1715 ntTSL 5 BASIC12.61□□□□□ -0.39
Trav8d-1Q5R1H8 Mdp1-201ENSMUST00000002400 1733 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Trav8d-1Q5R1H8 Bag6-201ENSMUST00000025250 3858 ntAPPRIS P3 TSL 5 BASIC12.61□□□□□ -0.39
Trav8d-1Q5R1H8 Cct7-201ENSMUST00000032078 2441 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Trav8d-1Q5R1H8 Gm26752-201ENSMUST00000181086 1537 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Trav8d-1Q5R1H8 Gnat1-201ENSMUST00000010205 2328 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Trav8d-1Q5R1H8 Cd151-202ENSMUST00000106000 1865 ntAPPRIS P1 TSL 5 BASIC12.61□□□□□ -0.39
Trav8d-1Q5R1H8 Disc1-207ENSMUST00000121953 2676 ntAPPRIS ALT2 TSL 1 (best) BASIC12.61□□□□□ -0.39
Trav8d-1Q5R1H8 Asb2-201ENSMUST00000021617 2690 ntAPPRIS P2 TSL 1 (best) BASIC12.61□□□□□ -0.39
Trav8d-1Q5R1H8 Ralgapb-201ENSMUST00000046274 8366 ntAPPRIS ALT1 TSL 5 BASIC12.61□□□□□ -0.39
Trav8d-1Q5R1H8 Cdkn1b-203ENSMUST00000204807 1757 ntAPPRIS P1 TSL 5 BASIC12.61□□□□□ -0.39
Trav8d-1Q5R1H8 Gm45760-201ENSMUST00000212190 1782 ntBASIC12.61□□□□□ -0.39
Trav8d-1Q5R1H8 Gm19569-202ENSMUST00000184658 1305 ntTSL 2 BASIC12.61□□□□□ -0.39
Trav8d-1Q5R1H8 Psen2-204ENSMUST00000111106 2020 ntAPPRIS P2 TSL 5 BASIC12.61□□□□□ -0.39
Trav8d-1Q5R1H8 Slc35a2-202ENSMUST00000115660 3094 ntAPPRIS ALT2 TSL 1 (best) BASIC12.6□□□□□ -0.39
Trav8d-1Q5R1H8 Cc2d1b-201ENSMUST00000030320 3303 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Trav8d-1Q5R1H8 Fbxl8-201ENSMUST00000036221 1901 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Trav8d-1Q5R1H8 Ubxn11-202ENSMUST00000074690 1573 ntAPPRIS P2 TSL 1 (best) BASIC12.6□□□□□ -0.39
Trav8d-1Q5R1H8 Trim24-203ENSMUST00000120428 3940 ntAPPRIS ALT2 TSL 1 (best) BASIC12.6□□□□□ -0.39
Trav8d-1Q5R1H8 Prrg4-201ENSMUST00000028593 2872 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Trav8d-1Q5R1H8 Chd4-203ENSMUST00000112392 6652 ntAPPRIS ALT2 TSL 5 BASIC12.6□□□□□ -0.39
Trav8d-1Q5R1H8 Midn-201ENSMUST00000042057 3727 ntAPPRIS P3 TSL 1 (best) BASIC12.6□□□□□ -0.39
Trav8d-1Q5R1H8 Olfr718-ps1-203ENSMUST00000215102 4913 ntAPPRIS P5 TSL 5 BASIC12.6□□□□□ -0.39
Trav8d-1Q5R1H8 Slc25a11-201ENSMUST00000014750 1711 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Trav8d-1Q5R1H8 Dis3-201ENSMUST00000042471 5150 ntAPPRIS P1 TSL 5 BASIC12.6□□□□□ -0.39
Trav8d-1Q5R1H8 Ppp3cb-206ENSMUST00000161989 2322 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Trav8d-1Q5R1H8 Golt1b-201ENSMUST00000032372 2818 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Trav8d-1Q5R1H8 Dr1-201ENSMUST00000031190 3085 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Trav8d-1Q5R1H8 Hist1h2bf-201ENSMUST00000105106 461 ntAPPRIS P1 BASIC12.6□□□□□ -0.39
Trav8d-1Q5R1H8 Mafg-202ENSMUST00000106180 732 ntAPPRIS P1 TSL 2 BASIC12.6□□□□□ -0.39
Trav8d-1Q5R1H8 Mafg-204ENSMUST00000106182 1104 ntAPPRIS P1 TSL 2 BASIC12.6□□□□□ -0.39
Trav8d-1Q5R1H8 Lce1j-201ENSMUST00000107304 420 ntAPPRIS P1 BASIC12.6□□□□□ -0.39
Trav8d-1Q5R1H8 Gm11336-201ENSMUST00000118168 334 ntBASIC12.6□□□□□ -0.39
Trav8d-1Q5R1H8 Lyzl4-202ENSMUST00000120918 959 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Trav8d-1Q5R1H8 Rapgef3os1-201ENSMUST00000149373 483 ntTSL 3 BASIC12.6□□□□□ -0.39
Trav8d-1Q5R1H8 Tppp3-201ENSMUST00000014990 1127 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Trav8d-1Q5R1H8 Znhit2-201ENSMUST00000162726 1281 ntAPPRIS P1 BASIC12.6□□□□□ -0.39
Trav8d-1Q5R1H8 Pyy-201ENSMUST00000017455 555 ntAPPRIS P3 TSL 1 (best) BASIC12.6□□□□□ -0.39
Trav8d-1Q5R1H8 Gm26827-201ENSMUST00000181911 148 ntTSL 5 BASIC12.6□□□□□ -0.39
Trav8d-1Q5R1H8 Aga-203ENSMUST00000211424 1147 ntAPPRIS ALT2 TSL 1 (best) BASIC12.6□□□□□ -0.39
Trav8d-1Q5R1H8 Irx3os-201ENSMUST00000062522 2988 ntTSL 5 BASIC12.6□□□□□ -0.39
Trav8d-1Q5R1H8 Exosc5-201ENSMUST00000079634 1020 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Trav8d-1Q5R1H8 Ewsr1-204ENSMUST00000093365 1290 ntTSL 5 BASIC12.6□□□□□ -0.39
Trav8d-1Q5R1H8 Npw-201ENSMUST00000095544 638 ntAPPRIS ALT2 TSL 1 (best) BASIC12.6□□□□□ -0.39
Trav8d-1Q5R1H8 Gdf15-201ENSMUST00000003808 1545 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Trav8d-1Q5R1H8 Loxl4-203ENSMUST00000164786 2617 ntAPPRIS ALT2 TSL 1 (best) BASIC12.6□□□□□ -0.39
Trav8d-1Q5R1H8 Gm17108-201ENSMUST00000168625 2877 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Trav8d-1Q5R1H8 Rassf1-204ENSMUST00000122225 1783 ntTSL 5 BASIC12.6□□□□□ -0.39
Trav8d-1Q5R1H8 Clip2-201ENSMUST00000036999 4893 ntAPPRIS ALT2 TSL 1 (best) BASIC12.6□□□□□ -0.39
Trav8d-1Q5R1H8 Irf5-205ENSMUST00000167252 1693 ntAPPRIS ALT2 TSL 1 (best) BASIC12.6□□□□□ -0.39
Trav8d-1Q5R1H8 Anks1b-205ENSMUST00000179694 2663 ntTSL 5 BASIC12.6□□□□□ -0.39
Trav8d-1Q5R1H8 AI849053-201ENSMUST00000181021 2658 ntTSL 3 BASIC12.6□□□□□ -0.39
Trav8d-1Q5R1H8 Ush1g-201ENSMUST00000103037 3306 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Trav8d-1Q5R1H8 Apoa5-201ENSMUST00000034584 2312 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Trav8d-1Q5R1H8 Nap1l5-201ENSMUST00000059539 1844 ntAPPRIS P1 BASIC12.6□□□□□ -0.39
Trav8d-1Q5R1H8 Spg21-202ENSMUST00000213957 1302 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Trav8d-1Q5R1H8 Igfbp2-201ENSMUST00000047328 1307 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Trav8d-1Q5R1H8 Adamts7-201ENSMUST00000113059 5379 ntAPPRIS ALT2 TSL 5 BASIC12.6□□□□□ -0.39
Retrieved 100 of 76,532 protein–RNA pairs in 42.6 ms