Protein–RNA interactions for Protein: Q5NCP0

Rnf43, E3 ubiquitin-protein ligase RNF43, mousemouse

Predictions only

Length 784 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf43Q5NCP0 Rbfox2-204ENSMUST00000171751 3558 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
Rnf43Q5NCP0 Hnrnpl-202ENSMUST00000172529 1898 ntTSL 5 BASIC15.61■□□□□ 0.09
Rnf43Q5NCP0 Disp3-201ENSMUST00000047720 5282 ntAPPRIS P1 TSL 5 BASIC15.61■□□□□ 0.09
Rnf43Q5NCP0 Rasgrp1-207ENSMUST00000178884 5104 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Rnf43Q5NCP0 Efcab8-203ENSMUST00000175856 1703 ntAPPRIS ALT2 TSL 2 BASIC15.61■□□□□ 0.09
Rnf43Q5NCP0 Tacstd2-201ENSMUST00000058178 1735 ntAPPRIS P1 BASIC15.61■□□□□ 0.09
Rnf43Q5NCP0 Rpl37rt-201ENSMUST00000100847 682 ntTSL 3 BASIC15.61■□□□□ 0.09
Rnf43Q5NCP0 Nudt1-204ENSMUST00000110826 606 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Rnf43Q5NCP0 Il15ra-206ENSMUST00000114834 784 ntAPPRIS ALT2 TSL 1 (best) BASIC15.61■□□□□ 0.09
Rnf43Q5NCP0 Gm16198-201ENSMUST00000118766 670 ntBASIC15.61■□□□□ 0.09
Rnf43Q5NCP0 Gm22175-201ENSMUST00000175007 78 ntBASIC15.61■□□□□ 0.09
Rnf43Q5NCP0 AA465934-202ENSMUST00000176545 356 ntTSL 2 BASIC15.61■□□□□ 0.09
Rnf43Q5NCP0 Syce1l-201ENSMUST00000034219 896 ntAPPRIS ALT2 TSL 1 (best) BASIC15.61■□□□□ 0.09
Rnf43Q5NCP0 Syce1l-202ENSMUST00000095173 791 ntAPPRIS P4 TSL 1 (best) BASIC15.61■□□□□ 0.09
Rnf43Q5NCP0 Sgta-202ENSMUST00000218208 1964 ntAPPRIS ALT1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Rnf43Q5NCP0 Ube2r2-201ENSMUST00000040008 3600 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Rnf43Q5NCP0 AC126250.1-201ENSMUST00000228343 1768 ntBASIC15.61■□□□□ 0.09
Rnf43Q5NCP0 G3bp2-204ENSMUST00000169094 2716 ntAPPRIS P3 TSL 1 (best) BASIC15.61■□□□□ 0.09
Rnf43Q5NCP0 Prkab1-202ENSMUST00000111999 2026 ntAPPRIS P1 TSL 2 BASIC15.61■□□□□ 0.09
Rnf43Q5NCP0 Tgfb2-201ENSMUST00000045288 5116 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Rnf43Q5NCP0 Abl1-202ENSMUST00000075759 6327 ntAPPRIS ALT2 TSL 1 (best) BASIC15.61■□□□□ 0.09
Rnf43Q5NCP0 Syn1-201ENSMUST00000081893 3209 ntAPPRIS P4 TSL 5 BASIC15.61■□□□□ 0.09
Rnf43Q5NCP0 Mef2b-205ENSMUST00000163756 1337 ntAPPRIS P3 TSL 2 BASIC15.61■□□□□ 0.09
Rnf43Q5NCP0 Slc29a4-201ENSMUST00000058418 2789 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Rnf43Q5NCP0 Arhgef2-202ENSMUST00000107510 4390 ntAPPRIS ALT2 TSL 1 (best) BASIC15.61■□□□□ 0.09
Rnf43Q5NCP0 Chst8-201ENSMUST00000078686 2372 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Rnf43Q5NCP0 Coch-202ENSMUST00000164782 2681 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Rnf43Q5NCP0 Comp-201ENSMUST00000003659 2416 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Rnf43Q5NCP0 Wnt10b-206ENSMUST00000228546 2709 ntBASIC15.6■□□□□ 0.09
Rnf43Q5NCP0 Tmem214-201ENSMUST00000114716 2220 ntAPPRIS ALT2 TSL 5 BASIC15.6■□□□□ 0.09
Rnf43Q5NCP0 Tfap2a-206ENSMUST00000224665 1958 ntAPPRIS ALT1 BASIC15.6■□□□□ 0.09
Rnf43Q5NCP0 Enah-202ENSMUST00000111024 3572 ntAPPRIS ALT2 TSL 5 BASIC15.6■□□□□ 0.09
Rnf43Q5NCP0 Fam178b-202ENSMUST00000170295 2286 ntAPPRIS ALT2 TSL 5 BASIC15.6■□□□□ 0.09
Rnf43Q5NCP0 Mtmr12-201ENSMUST00000038172 6840 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Rnf43Q5NCP0 Shank3-202ENSMUST00000066545 4702 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
Rnf43Q5NCP0 Tnfsf13-202ENSMUST00000108648 1503 ntAPPRIS ALT2 TSL 5 BASIC15.6■□□□□ 0.09
Rnf43Q5NCP0 Stxbp6-201ENSMUST00000053768 4553 ntAPPRIS P1 TSL 5 BASIC15.6■□□□□ 0.09
Rnf43Q5NCP0 Ppfibp1-201ENSMUST00000016631 4851 ntAPPRIS P3 TSL 1 (best) BASIC15.6■□□□□ 0.09
Rnf43Q5NCP0 Brwd3-202ENSMUST00000101283 1066 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
Rnf43Q5NCP0 Gm25287-201ENSMUST00000103846 110 ntBASIC15.6■□□□□ 0.09
Rnf43Q5NCP0 Gm22918-201ENSMUST00000103855 110 ntBASIC15.6■□□□□ 0.09
Rnf43Q5NCP0 Hist1h3e-201ENSMUST00000105107 836 ntAPPRIS P1 BASIC15.6■□□□□ 0.09
Rnf43Q5NCP0 Gm9385-201ENSMUST00000117563 472 ntBASIC15.6■□□□□ 0.09
Rnf43Q5NCP0 Cmc2-202ENSMUST00000128304 394 ntTSL 5 BASIC15.6■□□□□ 0.09
Rnf43Q5NCP0 Ccer2-201ENSMUST00000178767 1054 ntAPPRIS P1 TSL 5 BASIC15.6■□□□□ 0.09
Rnf43Q5NCP0 Gm35911-201ENSMUST00000198837 677 ntAPPRIS P1 TSL 5 BASIC15.6■□□□□ 0.09
Rnf43Q5NCP0 Gm18057-201ENSMUST00000208220 503 ntBASIC15.6■□□□□ 0.09
Rnf43Q5NCP0 Pabpn1l-202ENSMUST00000212966 1113 ntAPPRIS ALT2 TSL 1 (best) BASIC15.6■□□□□ 0.09
Rnf43Q5NCP0 Lcn5-201ENSMUST00000028306 696 ntAPPRIS P4 TSL 1 (best) BASIC15.6■□□□□ 0.09
Rnf43Q5NCP0 Rpl28-201ENSMUST00000032597 1106 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Rnf43Q5NCP0 Twf2-201ENSMUST00000024047 1596 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Rnf43Q5NCP0 Ttc9c-201ENSMUST00000088092 1585 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Rnf43Q5NCP0 Atp5a1-201ENSMUST00000026495 2471 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Rnf43Q5NCP0 Renbp-201ENSMUST00000114379 1318 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
Rnf43Q5NCP0 Wac-215ENSMUST00000171042 2205 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
Rnf43Q5NCP0 Mri1-203ENSMUST00000126435 2819 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Rnf43Q5NCP0 Ptprd-206ENSMUST00000107289 9899 ntAPPRIS P1 TSL 5 BASIC15.6■□□□□ 0.09
Rnf43Q5NCP0 Gm14634-201ENSMUST00000139163 1662 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
Rnf43Q5NCP0 Zbtb25-204ENSMUST00000176278 1672 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Rnf43Q5NCP0 Slc35a1-201ENSMUST00000029970 2039 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Rnf43Q5NCP0 Tdg-ps-201ENSMUST00000051363 2968 ntBASIC15.6■□□□□ 0.09
Rnf43Q5NCP0 Slco3a1-201ENSMUST00000026897 4589 ntAPPRIS P4 TSL 1 (best) BASIC15.6■□□□□ 0.09
Rnf43Q5NCP0 Casc3-201ENSMUST00000017384 3963 ntAPPRIS P1 TSL 2 BASIC15.6■□□□□ 0.09
Rnf43Q5NCP0 Sclt1-201ENSMUST00000026866 3005 ntAPPRIS P1 TSL 5 BASIC15.6■□□□□ 0.09
Rnf43Q5NCP0 Hira-202ENSMUST00000120532 2063 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
Rnf43Q5NCP0 Fam199x-201ENSMUST00000047852 8299 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Rnf43Q5NCP0 Kifc3-212ENSMUST00000213004 2453 ntAPPRIS ALT2 TSL 1 (best) BASIC15.59■□□□□ 0.09
Rnf43Q5NCP0 Brsk2-202ENSMUST00000075528 2160 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
Rnf43Q5NCP0 Dynlt1c-201ENSMUST00000092966 2589 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Rnf43Q5NCP0 Rimbp3-201ENSMUST00000169803 5787 ntAPPRIS P1 BASIC15.59■□□□□ 0.09
Rnf43Q5NCP0 Pdzd11-201ENSMUST00000015812 1626 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Rnf43Q5NCP0 Ppil3-203ENSMUST00000114348 1033 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Rnf43Q5NCP0 BC028777-201ENSMUST00000137883 985 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
Rnf43Q5NCP0 Gm14321-202ENSMUST00000139927 351 ntTSL 5 BASIC15.59■□□□□ 0.09
Rnf43Q5NCP0 4930544D05Rik-203ENSMUST00000144960 624 ntAPPRIS P2 TSL 5 BASIC15.59■□□□□ 0.09
Rnf43Q5NCP0 Trip6-203ENSMUST00000199121 366 ntTSL 3 BASIC15.59■□□□□ 0.09
Rnf43Q5NCP0 Klrg2-202ENSMUST00000201345 1225 ntAPPRIS ALT2 TSL 5 BASIC15.59■□□□□ 0.09
Rnf43Q5NCP0 Col18a1-202ENSMUST00000081654 5063 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
Rnf43Q5NCP0 Zdhhc1-203ENSMUST00000212303 2056 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Rnf43Q5NCP0 Gm19430-201ENSMUST00000193847 2137 ntBASIC15.59■□□□□ 0.09
Rnf43Q5NCP0 Cfap69-205ENSMUST00000135252 2188 ntAPPRIS ALT2 TSL 1 (best) BASIC15.59■□□□□ 0.09
Rnf43Q5NCP0 Rgma-204ENSMUST00000139780 3371 ntAPPRIS ALT2 TSL 1 (best) BASIC15.59■□□□□ 0.09
Rnf43Q5NCP0 Rbfox2-206ENSMUST00000227314 1810 ntBASIC15.59■□□□□ 0.09
Rnf43Q5NCP0 CT025626.1-201ENSMUST00000223735 1455 ntBASIC15.59■□□□□ 0.09
Rnf43Q5NCP0 Itsn1-203ENSMUST00000095909 6103 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
Rnf43Q5NCP0 Hmgb3-201ENSMUST00000015361 1544 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.09
Rnf43Q5NCP0 1700034J05Rik-202ENSMUST00000111622 2023 ntAPPRIS ALT2 TSL 1 (best) BASIC15.58■□□□□ 0.09
Rnf43Q5NCP0 Nkpd1-202ENSMUST00000207576 2916 ntAPPRIS P2 TSL 5 BASIC15.58■□□□□ 0.09
Rnf43Q5NCP0 Ptprs-201ENSMUST00000067538 6855 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
Rnf43Q5NCP0 Macrod2-201ENSMUST00000043836 3552 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
Rnf43Q5NCP0 Cnbp-203ENSMUST00000113619 1661 ntAPPRIS P2 TSL 1 (best) BASIC15.58■□□□□ 0.08
Rnf43Q5NCP0 Slc8b1-202ENSMUST00000076051 2661 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
Rnf43Q5NCP0 Taf6l-206ENSMUST00000176610 2203 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
Rnf43Q5NCP0 Prpf3-207ENSMUST00000161476 2732 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
Rnf43Q5NCP0 Ivns1abp-203ENSMUST00000111887 2783 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
Rnf43Q5NCP0 Asf1b-201ENSMUST00000005607 1788 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
Rnf43Q5NCP0 Mettl23-201ENSMUST00000106370 1276 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
Rnf43Q5NCP0 Eef1akmt4-201ENSMUST00000115522 1130 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
Rnf43Q5NCP0 Esd-207ENSMUST00000176957 1117 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
Rnf43Q5NCP0 Gm10253-201ENSMUST00000194270 940 ntBASIC15.58■□□□□ 0.08
Retrieved 100 of 76,532 protein–RNA pairs in 36.8 ms