Protein–RNA interactions for Protein: Q4FK66

Prpf38a, Pre-mRNA-splicing factor 38A, mousemouse

Known RBP Predictions only

Length 312 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Prpf38aQ4FK66 Urgcp-206ENSMUST00000170116 5528 ntAPPRIS ALT2 TSL 5 BASIC17.87■□□□□ 0.45
Prpf38aQ4FK66 Tcea1-202ENSMUST00000165720 2854 ntTSL 5 BASIC17.87■□□□□ 0.45
Prpf38aQ4FK66 Pnkp-203ENSMUST00000107876 1770 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Prpf38aQ4FK66 Trafd1-202ENSMUST00000120784 2425 ntAPPRIS ALT2 TSL 1 (best) BASIC17.87■□□□□ 0.45
Prpf38aQ4FK66 Mag-203ENSMUST00000187137 2434 ntAPPRIS P2 TSL 1 (best) BASIC17.87■□□□□ 0.45
Prpf38aQ4FK66 Gm15998-201ENSMUST00000135144 1844 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
Prpf38aQ4FK66 Pfn2-203ENSMUST00000120289 905 ntTSL 2 BASIC17.87■□□□□ 0.45
Prpf38aQ4FK66 AC155252.2-201ENSMUST00000226946 680 ntBASIC17.87■□□□□ 0.45
Prpf38aQ4FK66 Prdx4-201ENSMUST00000026328 990 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Prpf38aQ4FK66 Crygn-201ENSMUST00000047119 768 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Prpf38aQ4FK66 Lce1f-201ENSMUST00000047153 728 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Prpf38aQ4FK66 Krtap19-3-201ENSMUST00000075284 526 ntAPPRIS P1 BASIC17.87■□□□□ 0.45
Prpf38aQ4FK66 Fads3-201ENSMUST00000115995 3269 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Prpf38aQ4FK66 Rab32-201ENSMUST00000019974 2149 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Prpf38aQ4FK66 Stk11-202ENSMUST00000105370 1474 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
Prpf38aQ4FK66 Camsap3-201ENSMUST00000057028 4450 ntAPPRIS P3 TSL 1 (best) BASIC17.87■□□□□ 0.45
Prpf38aQ4FK66 Cnbd2-201ENSMUST00000037096 2277 ntAPPRIS P2 TSL 1 (best) BASIC17.87■□□□□ 0.45
Prpf38aQ4FK66 Ddx51-201ENSMUST00000031478 4846 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Prpf38aQ4FK66 Lefty2-201ENSMUST00000085797 2473 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Prpf38aQ4FK66 Cd82-202ENSMUST00000099696 1657 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Prpf38aQ4FK66 Gm16675-202ENSMUST00000208508 2586 ntTSL 2 BASIC17.86■□□□□ 0.45
Prpf38aQ4FK66 Prr23a3-201ENSMUST00000167951 1817 ntAPPRIS P1 BASIC17.86■□□□□ 0.45
Prpf38aQ4FK66 Ttc39b-202ENSMUST00000048274 1804 ntAPPRIS ALT2 TSL 1 (best) BASIC17.86■□□□□ 0.45
Prpf38aQ4FK66 Klhl34-201ENSMUST00000087157 1935 ntAPPRIS P1 BASIC17.86■□□□□ 0.45
Prpf38aQ4FK66 Osr1-201ENSMUST00000057021 2012 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Prpf38aQ4FK66 Mbp-206ENSMUST00000102812 2108 ntAPPRIS ALT2 TSL 2 BASIC17.86■□□□□ 0.45
Prpf38aQ4FK66 Ern1-202ENSMUST00000106799 660 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
Prpf38aQ4FK66 Slc31a2-203ENSMUST00000107468 743 ntAPPRIS ALT1 TSL 5 BASIC17.86■□□□□ 0.45
Prpf38aQ4FK66 Gm9385-201ENSMUST00000117563 472 ntBASIC17.86■□□□□ 0.45
Prpf38aQ4FK66 Nudt6-208ENSMUST00000146324 1264 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
Prpf38aQ4FK66 Gm20553-201ENSMUST00000204205 844 ntBASIC17.86■□□□□ 0.45
Prpf38aQ4FK66 1700025J12Rik-201ENSMUST00000205586 630 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
Prpf38aQ4FK66 Pold4-201ENSMUST00000025773 910 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Prpf38aQ4FK66 Cfdp1-201ENSMUST00000034432 1178 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Prpf38aQ4FK66 Usp35-202ENSMUST00000168435 3982 ntAPPRIS P1 TSL 5 BASIC17.86■□□□□ 0.45
Prpf38aQ4FK66 Nr1i3-203ENSMUST00000111328 1359 ntAPPRIS ALT2 TSL 1 (best) BASIC17.86■□□□□ 0.45
Prpf38aQ4FK66 Fam219b-202ENSMUST00000114200 3017 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Prpf38aQ4FK66 Zfp281-202ENSMUST00000112046 4937 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Prpf38aQ4FK66 Irgc1-201ENSMUST00000080594 1737 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Prpf38aQ4FK66 Rbfox2-204ENSMUST00000171751 3558 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
Prpf38aQ4FK66 Sik3-204ENSMUST00000126865 6287 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Prpf38aQ4FK66 Acat3-201ENSMUST00000043923 2123 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Prpf38aQ4FK66 Dars-201ENSMUST00000027602 2175 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Prpf38aQ4FK66 Bclaf3-201ENSMUST00000057180 2513 ntAPPRIS ALT2 TSL 1 (best) BASIC17.86■□□□□ 0.45
Prpf38aQ4FK66 Rcor1-202ENSMUST00000116388 2720 ntAPPRIS P2 TSL 1 (best) BASIC17.85■□□□□ 0.45
Prpf38aQ4FK66 Plpp6-201ENSMUST00000045674 2859 ntAPPRIS P1 BASIC17.85■□□□□ 0.45
Prpf38aQ4FK66 Knl1-201ENSMUST00000028799 5527 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
Prpf38aQ4FK66 Urgcp-201ENSMUST00000053427 5527 ntAPPRIS ALT2 TSL 5 BASIC17.85■□□□□ 0.45
Prpf38aQ4FK66 Ifnz-201ENSMUST00000105144 1462 ntAPPRIS P1 BASIC17.85■□□□□ 0.45
Prpf38aQ4FK66 Nudt1-204ENSMUST00000110826 606 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Prpf38aQ4FK66 1500011B03Rik-202ENSMUST00000112160 1333 ntAPPRIS ALT2 TSL 1 (best) BASIC17.85■□□□□ 0.45
Prpf38aQ4FK66 Tpm1-214ENSMUST00000113701 1677 ntTSL 5 BASIC17.85■□□□□ 0.45
Prpf38aQ4FK66 Bola3-202ENSMUST00000120040 583 ntTSL 3 BASIC17.85■□□□□ 0.45
Prpf38aQ4FK66 Ndufab1-203ENSMUST00000123296 1416 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Prpf38aQ4FK66 A530058N18Rik-205ENSMUST00000143993 550 ntTSL 3 BASIC17.85■□□□□ 0.45
Prpf38aQ4FK66 Tmprss5-204ENSMUST00000167095 1146 ntAPPRIS ALT2 TSL 5 BASIC17.85■□□□□ 0.45
Prpf38aQ4FK66 Rhox2a-202ENSMUST00000173650 735 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
Prpf38aQ4FK66 Rpph1-201ENSMUST00000175096 319 ntBASIC17.85■□□□□ 0.45
Prpf38aQ4FK66 Rhox2c-204ENSMUST00000184688 720 ntTSL 5 BASIC17.85■□□□□ 0.45
Prpf38aQ4FK66 Lrriq3-201ENSMUST00000029833 2652 ntAPPRIS P2 TSL 1 (best) BASIC17.85■□□□□ 0.45
Prpf38aQ4FK66 Snx17-201ENSMUST00000031029 2018 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Prpf38aQ4FK66 Chmp2b-201ENSMUST00000004965 1838 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Prpf38aQ4FK66 Isg20l2-201ENSMUST00000055984 2893 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Prpf38aQ4FK66 Olfr370-201ENSMUST00000058609 1096 ntAPPRIS P1 BASIC17.85■□□□□ 0.45
Prpf38aQ4FK66 Gm9945-201ENSMUST00000067523 932 ntAPPRIS P1 BASIC17.85■□□□□ 0.45
Prpf38aQ4FK66 Zkscan3-201ENSMUST00000070785 2561 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Prpf38aQ4FK66 Hectd3-201ENSMUST00000050067 4583 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Prpf38aQ4FK66 Usp27x-201ENSMUST00000115744 3240 ntAPPRIS P1 BASIC17.85■□□□□ 0.45
Prpf38aQ4FK66 Dmpk-202ENSMUST00000108473 2588 ntAPPRIS ALT2 TSL 1 (best) BASIC17.85■□□□□ 0.45
Prpf38aQ4FK66 Rft1-201ENSMUST00000064230 2387 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Prpf38aQ4FK66 Ppfia3-207ENSMUST00000211067 4565 ntAPPRIS P1 TSL 5 BASIC17.84■□□□□ 0.45
Prpf38aQ4FK66 1700034J05Rik-202ENSMUST00000111622 2023 ntAPPRIS ALT2 TSL 1 (best) BASIC17.84■□□□□ 0.45
Prpf38aQ4FK66 Slc35a1-201ENSMUST00000029970 2039 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Prpf38aQ4FK66 Gps1-208ENSMUST00000208737 1843 ntAPPRIS ALT1 TSL 5 BASIC17.84■□□□□ 0.45
Prpf38aQ4FK66 Gm3045-201ENSMUST00000212844 1825 ntAPPRIS P1 TSL 5 BASIC17.84■□□□□ 0.45
Prpf38aQ4FK66 Nrn1-204ENSMUST00000224323 1779 ntBASIC17.84■□□□□ 0.45
Prpf38aQ4FK66 Mdp1-201ENSMUST00000002400 1733 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Prpf38aQ4FK66 Hdac2-202ENSMUST00000105510 3250 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
Prpf38aQ4FK66 Pdzd11-201ENSMUST00000015812 1626 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Prpf38aQ4FK66 Tspan32-204ENSMUST00000105923 1499 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
Prpf38aQ4FK66 Ngly1-201ENSMUST00000022310 2935 ntAPPRIS P2 TSL 1 (best) BASIC17.84■□□□□ 0.45
Prpf38aQ4FK66 Gm13410-201ENSMUST00000117058 1415 ntBASIC17.84■□□□□ 0.45
Prpf38aQ4FK66 Pycrl-201ENSMUST00000053918 1353 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Prpf38aQ4FK66 1810062O18Rik-203ENSMUST00000129237 647 ntTSL 5 BASIC17.84■□□□□ 0.45
Prpf38aQ4FK66 Gm11025-201ENSMUST00000140773 466 ntBASIC17.84■□□□□ 0.45
Prpf38aQ4FK66 Gm26769-201ENSMUST00000180469 619 ntTSL 3 BASIC17.84■□□□□ 0.45
Prpf38aQ4FK66 Gm43397-201ENSMUST00000196422 481 ntTSL 3 BASIC17.84■□□□□ 0.45
Prpf38aQ4FK66 Ftl1-ps1-202ENSMUST00000222435 938 ntAPPRIS P1 BASIC17.84■□□□□ 0.45
Prpf38aQ4FK66 Orc6-201ENSMUST00000034132 1287 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Prpf38aQ4FK66 C1qtnf2-201ENSMUST00000057679 1211 ntAPPRIS P2 TSL 1 (best) BASIC17.84■□□□□ 0.45
Prpf38aQ4FK66 1600017P15Rik-201ENSMUST00000083427 412 ntBASIC17.84■□□□□ 0.45
Prpf38aQ4FK66 D930028M14Rik-201ENSMUST00000098678 1003 ntTSL 2 BASIC17.84■□□□□ 0.45
Prpf38aQ4FK66 Gldc-201ENSMUST00000025778 3754 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Prpf38aQ4FK66 Cct7-201ENSMUST00000032078 2441 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Prpf38aQ4FK66 Msl1-201ENSMUST00000037915 4593 ntAPPRIS P2 TSL 1 (best) BASIC17.84■□□□□ 0.45
Prpf38aQ4FK66 Gm10501-201ENSMUST00000151136 2200 ntTSL 2 BASIC17.84■□□□□ 0.45
Prpf38aQ4FK66 Galnt13-204ENSMUST00000112636 7530 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Prpf38aQ4FK66 Kif22-201ENSMUST00000032915 2115 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Prpf38aQ4FK66 Tor1b-201ENSMUST00000028199 3039 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Prpf38aQ4FK66 Dnajc25-201ENSMUST00000095070 4023 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Retrieved 100 of 76,532 protein–RNA pairs in 79.7 ms