Protein–RNA interactions for Protein: Q4ACU6

Shank3, SH3 and multiple ankyrin repeat domains protein 3, mousemouse

Predictions only

Length 1,730 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Shank3Q4ACU6 Ccdc103-201ENSMUST00000021307 1841 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Shank3Q4ACU6 Papola-203ENSMUST00000163473 2544 ntTSL 5 BASIC18.86■□□□□ 0.61
Shank3Q4ACU6 Sphk1-202ENSMUST00000063446 2527 ntAPPRIS ALT2 TSL 2 BASIC18.86■□□□□ 0.61
Shank3Q4ACU6 Mtif3-203ENSMUST00000110564 1257 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Shank3Q4ACU6 Mtif3-204ENSMUST00000110566 1134 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Shank3Q4ACU6 Gm6222-201ENSMUST00000120787 396 ntBASIC18.86■□□□□ 0.61
Shank3Q4ACU6 Gm45552-201ENSMUST00000209340 778 ntTSL 3 BASIC18.86■□□□□ 0.61
Shank3Q4ACU6 Gm45384-201ENSMUST00000210451 277 ntBASIC18.86■□□□□ 0.61
Shank3Q4ACU6 Isca2-201ENSMUST00000021667 883 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Shank3Q4ACU6 Gm36236-201ENSMUST00000220780 701 ntTSL 3 BASIC18.86■□□□□ 0.61
Shank3Q4ACU6 Chchd5-201ENSMUST00000035481 1325 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Shank3Q4ACU6 Hoxb1-201ENSMUST00000019117 2086 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Shank3Q4ACU6 Fancg-201ENSMUST00000030165 2771 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Shank3Q4ACU6 Ggn-205ENSMUST00000209019 2148 ntAPPRIS ALT2 TSL 1 (best) BASIC18.86■□□□□ 0.61
Shank3Q4ACU6 Mmp11-202ENSMUST00000120281 1793 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Shank3Q4ACU6 Ecel1-203ENSMUST00000160810 2898 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Shank3Q4ACU6 Lrrc47-201ENSMUST00000030894 3395 ntAPPRIS P2 TSL 1 (best) BASIC18.86■□□□□ 0.61
Shank3Q4ACU6 Slc6a8-204ENSMUST00000114467 2509 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Shank3Q4ACU6 Nmi-202ENSMUST00000112705 1130 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Shank3Q4ACU6 Gm13568-201ENSMUST00000156099 446 ntTSL 5 BASIC18.86■□□□□ 0.61
Shank3Q4ACU6 Il11-202ENSMUST00000163481 990 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
Shank3Q4ACU6 Gm15494-202ENSMUST00000171665 451 ntTSL 2 BASIC18.86■□□□□ 0.61
Shank3Q4ACU6 Wfdc2-201ENSMUST00000017867 849 ntAPPRIS P2 TSL 1 (best) BASIC18.86■□□□□ 0.61
Shank3Q4ACU6 Mzt2-201ENSMUST00000023351 1035 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Shank3Q4ACU6 Ercc1-201ENSMUST00000003645 1375 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Shank3Q4ACU6 Ephx3-202ENSMUST00000162117 1590 ntAPPRIS ALT2 TSL 1 (best) BASIC18.85■□□□□ 0.61
Shank3Q4ACU6 Arhgap23-202ENSMUST00000107601 5450 ntTSL 5 BASIC18.85■□□□□ 0.61
Shank3Q4ACU6 3110082I17Rik-204ENSMUST00000198474 2030 ntTSL 2 BASIC18.85■□□□□ 0.61
Shank3Q4ACU6 Nfe2l2-201ENSMUST00000102672 2475 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Shank3Q4ACU6 Mir1897-201ENSMUST00000122581 272 ntBASIC18.85■□□□□ 0.61
Shank3Q4ACU6 Hoxa7-202ENSMUST00000134367 807 ntTSL 5 BASIC18.85■□□□□ 0.61
Shank3Q4ACU6 8430429K09Rik-204ENSMUST00000146456 1675 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
Shank3Q4ACU6 Tnfrsf12a-202ENSMUST00000167059 858 ntTSL 2 BASIC18.85■□□□□ 0.61
Shank3Q4ACU6 H2-D1-202ENSMUST00000172785 2102 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Shank3Q4ACU6 1010001N08Rik-201ENSMUST00000180789 1967 ntTSL 2 BASIC18.85■□□□□ 0.61
Shank3Q4ACU6 AC153937.4-201ENSMUST00000218479 661 ntTSL 3 BASIC18.85■□□□□ 0.61
Shank3Q4ACU6 Tnfrsf12a-201ENSMUST00000024698 963 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Shank3Q4ACU6 Shisa2-201ENSMUST00000053949 3119 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Shank3Q4ACU6 Hbs1l-203ENSMUST00000092674 2625 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
Shank3Q4ACU6 P4ha2-202ENSMUST00000093107 2263 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
Shank3Q4ACU6 Osbpl1a-206ENSMUST00000121774 2931 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
Shank3Q4ACU6 Golga7b-201ENSMUST00000087123 2823 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Shank3Q4ACU6 Tap1-201ENSMUST00000041633 2614 ntAPPRIS ALT2 TSL 1 (best) BASIC18.84■□□□□ 0.61
Shank3Q4ACU6 Tes-202ENSMUST00000115467 2440 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Shank3Q4ACU6 Eml2-203ENSMUST00000120595 2255 ntAPPRIS ALT2 TSL 1 (best) BASIC18.84■□□□□ 0.61
Shank3Q4ACU6 Osr1-201ENSMUST00000057021 2012 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Shank3Q4ACU6 4930556H04Rik-201ENSMUST00000222451 1675 ntBASIC18.84■□□□□ 0.61
Shank3Q4ACU6 Kcnab2-202ENSMUST00000105648 1576 ntAPPRIS P3 TSL 1 (best) BASIC18.84■□□□□ 0.61
Shank3Q4ACU6 Art3-205ENSMUST00000120193 1371 ntAPPRIS ALT2 TSL 1 (best) BASIC18.84■□□□□ 0.61
Shank3Q4ACU6 1700042O10Rik-201ENSMUST00000151032 1075 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
Shank3Q4ACU6 Gm45668-201ENSMUST00000211271 493 ntBASIC18.84■□□□□ 0.61
Shank3Q4ACU6 4933405L10Rik-202ENSMUST00000211852 1097 ntAPPRIS ALT2 TSL 1 (best) BASIC18.84■□□□□ 0.61
Shank3Q4ACU6 Gm10561-201ENSMUST00000181563 1943 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
Shank3Q4ACU6 Pdpk1-201ENSMUST00000052462 1832 ntAPPRIS ALT2 TSL 1 (best) BASIC18.84■□□□□ 0.61
Shank3Q4ACU6 Gm26688-201ENSMUST00000181176 1568 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
Shank3Q4ACU6 Smad1-202ENSMUST00000066091 3099 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Shank3Q4ACU6 Gm21854-201ENSMUST00000179901 471 ntBASIC18.83■□□□□ 0.61
Shank3Q4ACU6 Gm9522-201ENSMUST00000182394 926 ntBASIC18.83■□□□□ 0.61
Shank3Q4ACU6 Ifitm3-201ENSMUST00000026565 678 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
Shank3Q4ACU6 Hilpda-201ENSMUST00000054445 982 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
Shank3Q4ACU6 Ogfr-201ENSMUST00000029087 2449 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
Shank3Q4ACU6 Alox12-202ENSMUST00000108574 2314 ntTSL 1 (best) BASIC18.83■□□□□ 0.61
Shank3Q4ACU6 Stat5b-201ENSMUST00000004143 5062 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
Shank3Q4ACU6 Olfr160-203ENSMUST00000215727 1667 ntAPPRIS P1 TSL 5 BASIC18.83■□□□□ 0.61
Shank3Q4ACU6 Upk1a-201ENSMUST00000006476 1421 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Shank3Q4ACU6 Ccni-201ENSMUST00000058550 2804 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Shank3Q4ACU6 Aste1-202ENSMUST00000123807 2349 ntAPPRIS ALT2 TSL 2 BASIC18.83■□□□□ 0.6
Shank3Q4ACU6 Gm17055-201ENSMUST00000166951 2232 ntTSL 5 BASIC18.83■□□□□ 0.6
Shank3Q4ACU6 Ociad1-202ENSMUST00000071081 1311 ntTSL 3 BASIC18.83■□□□□ 0.6
Shank3Q4ACU6 Plk1-201ENSMUST00000033154 2199 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Shank3Q4ACU6 Mrpl40-202ENSMUST00000119273 778 ntTSL 3 BASIC18.83■□□□□ 0.6
Shank3Q4ACU6 Cd63-ps-201ENSMUST00000145417 875 ntBASIC18.83■□□□□ 0.6
Shank3Q4ACU6 Tpi-rs2-201ENSMUST00000182471 756 ntBASIC18.83■□□□□ 0.6
Shank3Q4ACU6 Slc4a1ap-206ENSMUST00000201858 2109 ntAPPRIS ALT2 TSL 1 (best) BASIC18.83■□□□□ 0.6
Shank3Q4ACU6 Nudt17-201ENSMUST00000029742 1039 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
Shank3Q4ACU6 Mrps21-202ENSMUST00000072587 405 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Shank3Q4ACU6 Dlgap3-202ENSMUST00000106092 2901 ntTSL 5 BASIC18.83■□□□□ 0.6
Shank3Q4ACU6 Ext2-201ENSMUST00000028623 2871 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Shank3Q4ACU6 Mpp3-201ENSMUST00000062801 2848 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Shank3Q4ACU6 Prnd-202ENSMUST00000110170 1969 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Shank3Q4ACU6 Kat8-201ENSMUST00000033070 1579 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Shank3Q4ACU6 Phospho2-201ENSMUST00000028494 2260 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Shank3Q4ACU6 Ncmap-204ENSMUST00000105859 1801 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Shank3Q4ACU6 Necab3-201ENSMUST00000000895 1829 ntAPPRIS P2 TSL 1 (best) BASIC18.82■□□□□ 0.6
Shank3Q4ACU6 Mta1-201ENSMUST00000009099 2826 ntAPPRIS ALT2 TSL 5 BASIC18.82■□□□□ 0.6
Shank3Q4ACU6 Cdkl3-209ENSMUST00000120374 2770 ntAPPRIS ALT2 TSL 5 BASIC18.82■□□□□ 0.6
Shank3Q4ACU6 Ercc6l2-203ENSMUST00000067821 2743 ntAPPRIS P1 TSL 5 BASIC18.82■□□□□ 0.6
Shank3Q4ACU6 Znrf2-201ENSMUST00000079869 5886 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Shank3Q4ACU6 Ppp1r14d-202ENSMUST00000110820 790 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
Shank3Q4ACU6 Rpl17-ps10-201ENSMUST00000119383 555 ntBASIC18.82■□□□□ 0.6
Shank3Q4ACU6 Rpl17-ps9-201ENSMUST00000119541 555 ntBASIC18.82■□□□□ 0.6
Shank3Q4ACU6 Rpl17-ps4-201ENSMUST00000120241 555 ntBASIC18.82■□□□□ 0.6
Shank3Q4ACU6 Tmem219-204ENSMUST00000121532 915 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Shank3Q4ACU6 Gm12212-201ENSMUST00000141032 378 ntTSL 3 BASIC18.82■□□□□ 0.6
Shank3Q4ACU6 Lce1j-202ENSMUST00000186525 703 ntAPPRIS P1 TSL 3 BASIC18.82■□□□□ 0.6
Shank3Q4ACU6 Coa6-202ENSMUST00000211868 564 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Shank3Q4ACU6 Gm46209-201ENSMUST00000217912 553 ntBASIC18.82■□□□□ 0.6
Shank3Q4ACU6 Gm20445-201ENSMUST00000061905 565 ntBASIC18.82■□□□□ 0.6
Shank3Q4ACU6 Simc1-201ENSMUST00000118072 2116 ntAPPRIS ALT2 TSL 5 BASIC18.82■□□□□ 0.6
Shank3Q4ACU6 Arntl-204ENSMUST00000210238 2976 ntAPPRIS P1 TSL 5 BASIC18.82■□□□□ 0.6
Retrieved 100 of 76,532 protein–RNA pairs in 23.7 ms