Protein–RNA interactions for Protein: Q3V009

Tmed1, Transmembrane emp24 domain-containing protein 1, mousemouse

Predictions only

Length 227 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tmed1Q3V009 Otop3-202ENSMUST00000106543 2369 ntAPPRIS ALT2 TSL 1 (best) BASIC15.16■□□□□ 0.02
Tmed1Q3V009 Men1-204ENSMUST00000113500 2742 ntAPPRIS P2 TSL 5 BASIC15.16■□□□□ 0.02
Tmed1Q3V009 Wscd1-202ENSMUST00000108510 2956 ntAPPRIS P1 TSL 5 BASIC15.15■□□□□ 0.02
Tmed1Q3V009 Cyp4f37-201ENSMUST00000077639 2642 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Tmed1Q3V009 Ankrd13b-202ENSMUST00000092892 3336 ntAPPRIS P2 TSL 5 BASIC15.15■□□□□ 0.02
Tmed1Q3V009 Siglece-201ENSMUST00000032667 1849 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Tmed1Q3V009 Hykk-201ENSMUST00000039742 5110 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Tmed1Q3V009 Dctd-201ENSMUST00000033966 2072 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Tmed1Q3V009 D630014O11Rik-201ENSMUST00000160562 3019 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
Tmed1Q3V009 Sirpa-203ENSMUST00000103202 3982 ntAPPRIS P3 TSL 1 (best) BASIC15.15■□□□□ 0.02
Tmed1Q3V009 Sipa1-203ENSMUST00000164304 3614 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Tmed1Q3V009 1600014C10Rik-205ENSMUST00000178876 3283 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
Tmed1Q3V009 Arhgef17-201ENSMUST00000107032 10190 ntAPPRIS P2 TSL 5 BASIC15.15■□□□□ 0.02
Tmed1Q3V009 Gm26793-201ENSMUST00000180930 2732 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
Tmed1Q3V009 1700024G13Rik-201ENSMUST00000100723 850 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Tmed1Q3V009 Gm15545-203ENSMUST00000150613 1059 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
Tmed1Q3V009 Nudt21-204ENSMUST00000212981 1184 ntTSL 3 BASIC15.15■□□□□ 0.02
Tmed1Q3V009 Fkbp3-201ENSMUST00000021332 1022 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Tmed1Q3V009 Gm35240-201ENSMUST00000218335 661 ntTSL 2 BASIC15.15■□□□□ 0.02
Tmed1Q3V009 Mrpl36-203ENSMUST00000222030 680 ntAPPRIS P1 TSL 3 BASIC15.15■□□□□ 0.02
Tmed1Q3V009 AC112142.1-201ENSMUST00000228796 918 ntBASIC15.15■□□□□ 0.02
Tmed1Q3V009 Kifc3-203ENSMUST00000169748 3384 ntAPPRIS ALT2 TSL 1 (best) BASIC15.15■□□□□ 0.02
Tmed1Q3V009 Chd1-202ENSMUST00000024627 7916 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Tmed1Q3V009 Arid3a-202ENSMUST00000105376 4892 ntAPPRIS P3 TSL 1 (best) BASIC15.15■□□□□ 0.02
Tmed1Q3V009 Dohh-201ENSMUST00000072751 1444 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Tmed1Q3V009 Cdyl2-201ENSMUST00000109102 2411 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Tmed1Q3V009 Pcdhga12-201ENSMUST00000044851 5080 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Tmed1Q3V009 Fastk-203ENSMUST00000115043 3056 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
Tmed1Q3V009 Phkg2-202ENSMUST00000121004 1840 ntAPPRIS P1 TSL 5 BASIC15.15■□□□□ 0.02
Tmed1Q3V009 Fubp3-201ENSMUST00000055244 3648 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
Tmed1Q3V009 Sptlc1-201ENSMUST00000021920 2606 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Tmed1Q3V009 Gm6858-201ENSMUST00000208582 1468 ntBASIC15.14■□□□□ 0.01
Tmed1Q3V009 Slc39a1-201ENSMUST00000015467 2364 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Tmed1Q3V009 Slc48a1-201ENSMUST00000117892 2536 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Tmed1Q3V009 Rabggta-203ENSMUST00000169237 2547 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Tmed1Q3V009 Mamstr-201ENSMUST00000148532 1606 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Tmed1Q3V009 Asb2-204ENSMUST00000149431 2283 ntAPPRIS ALT2 TSL 1 (best) BASIC15.14■□□□□ 0.01
Tmed1Q3V009 Slc22a7-201ENSMUST00000087012 2007 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Tmed1Q3V009 Mtss1-201ENSMUST00000080371 4938 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Tmed1Q3V009 App-207ENSMUST00000227737 2827 ntBASIC15.14■□□□□ 0.01
Tmed1Q3V009 9530082P21Rik-202ENSMUST00000181291 1798 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
Tmed1Q3V009 Josd1-201ENSMUST00000023061 3394 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Tmed1Q3V009 Grm7-201ENSMUST00000071076 3127 ntAPPRIS ALT1 TSL 5 BASIC15.14■□□□□ 0.01
Tmed1Q3V009 Haus3-201ENSMUST00000060049 2073 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Tmed1Q3V009 Cacna1g-207ENSMUST00000107789 8383 ntAPPRIS ALT2 TSL 5 BASIC15.14■□□□□ 0.01
Tmed1Q3V009 Gid8-201ENSMUST00000029090 1655 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Tmed1Q3V009 Npb-202ENSMUST00000106194 530 ntAPPRIS ALT2 TSL 2 BASIC15.14■□□□□ 0.01
Tmed1Q3V009 Npb-203ENSMUST00000106195 542 ntAPPRIS P3 TSL 1 (best) BASIC15.14■□□□□ 0.01
Tmed1Q3V009 Calu-208ENSMUST00000173694 611 ntTSL 5 BASIC15.14■□□□□ 0.01
Tmed1Q3V009 Gm44430-201ENSMUST00000203376 995 ntBASIC15.14■□□□□ 0.01
Tmed1Q3V009 Chmp2a-203ENSMUST00000210587 930 ntAPPRIS P1 TSL 3 BASIC15.14■□□□□ 0.01
Tmed1Q3V009 Fgf8-202ENSMUST00000026241 1168 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
Tmed1Q3V009 Mocs1-201ENSMUST00000024797 2646 ntTSL 5 BASIC15.14■□□□□ 0.01
Tmed1Q3V009 6430573F11Rik-205ENSMUST00000171777 1825 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Tmed1Q3V009 Ccdc43-201ENSMUST00000092569 2366 ntAPPRIS P2 TSL 1 (best) BASIC15.14■□□□□ 0.01
Tmed1Q3V009 Rasa4-201ENSMUST00000042135 2914 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Tmed1Q3V009 Plekha4-207ENSMUST00000211227 2133 ntAPPRIS ALT2 TSL 1 (best) BASIC15.14■□□□□ 0.01
Tmed1Q3V009 Sema4c-201ENSMUST00000114991 3773 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Tmed1Q3V009 Ttc24-201ENSMUST00000050258 2251 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Tmed1Q3V009 Ip6k2-206ENSMUST00000193560 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC15.14■□□□□ 0.01
Tmed1Q3V009 Txnrd1-206ENSMUST00000219442 3531 ntAPPRIS P1 TSL 5 BASIC15.14■□□□□ 0.01
Tmed1Q3V009 Tmem30b-201ENSMUST00000042975 2991 ntAPPRIS P1 BASIC15.14■□□□□ 0.01
Tmed1Q3V009 Patz1-201ENSMUST00000057089 3118 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
Tmed1Q3V009 Nagk-203ENSMUST00000113851 1323 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
Tmed1Q3V009 Prrg4-201ENSMUST00000028593 2872 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Tmed1Q3V009 Hnf1a-201ENSMUST00000031535 3191 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Tmed1Q3V009 Camk2b-209ENSMUST00000109813 4023 ntAPPRIS P2 TSL 1 (best) BASIC15.14■□□□□ 0.01
Tmed1Q3V009 Camk2b-204ENSMUST00000090443 4004 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
Tmed1Q3V009 Gm38327-201ENSMUST00000195852 1755 ntBASIC15.13■□□□□ 0.01
Tmed1Q3V009 Cpq-201ENSMUST00000042167 1923 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Tmed1Q3V009 Reep1-201ENSMUST00000121469 3924 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Tmed1Q3V009 Slc44a5-201ENSMUST00000089948 4098 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Tmed1Q3V009 Zfp574-202ENSMUST00000179556 4140 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Tmed1Q3V009 Fam198a-204ENSMUST00000215990 2149 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Tmed1Q3V009 Gtse1-201ENSMUST00000170629 2721 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Tmed1Q3V009 Traf3ip1-201ENSMUST00000047242 3474 ntAPPRIS P2 TSL 1 (best) BASIC15.13■□□□□ 0.01
Tmed1Q3V009 Brpf1-210ENSMUST00000204626 4381 ntAPPRIS ALT2 TSL 1 (best) BASIC15.13■□□□□ 0.01
Tmed1Q3V009 Epb41l1-205ENSMUST00000109574 5904 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
Tmed1Q3V009 Trim39-203ENSMUST00000113706 3204 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Tmed1Q3V009 Izumo1r-204ENSMUST00000121116 726 ntTSL 2 BASIC15.13■□□□□ 0.01
Tmed1Q3V009 Gm11355-201ENSMUST00000121120 306 ntBASIC15.13■□□□□ 0.01
Tmed1Q3V009 Nrn1-202ENSMUST00000122286 691 ntTSL 3 BASIC15.13■□□□□ 0.01
Tmed1Q3V009 H2-K1-205ENSMUST00000172912 1570 ntAPPRIS ALT2 TSL 1 (best) BASIC15.13■□□□□ 0.01
Tmed1Q3V009 Aldh3a1-201ENSMUST00000019246 1729 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Tmed1Q3V009 Ttc32-203ENSMUST00000219488 768 ntTSL 3 BASIC15.13■□□□□ 0.01
Tmed1Q3V009 Gm32151-201ENSMUST00000223521 915 ntTSL 5 BASIC15.13■□□□□ 0.01
Tmed1Q3V009 Ctnnd2-203ENSMUST00000226119 4111 ntAPPRIS ALT2 BASIC15.13■□□□□ 0.01
Tmed1Q3V009 Sdhaf4-201ENSMUST00000027338 683 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Tmed1Q3V009 Gstm4-201ENSMUST00000029489 1707 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Tmed1Q3V009 Lce1h-201ENSMUST00000051521 706 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Tmed1Q3V009 Ly6h-202ENSMUST00000065417 985 ntAPPRIS ALT1 TSL 2 BASIC15.13■□□□□ 0.01
Tmed1Q3V009 Sec61b-201ENSMUST00000065678 564 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Tmed1Q3V009 Tmem2-202ENSMUST00000096194 6667 ntAPPRIS P1 TSL 5 BASIC15.13■□□□□ 0.01
Tmed1Q3V009 A930033H14Rik-201ENSMUST00000170048 2969 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Tmed1Q3V009 9330182L06Rik-201ENSMUST00000069538 4688 ntAPPRIS P2 TSL 1 (best) BASIC15.13■□□□□ 0.01
Tmed1Q3V009 Serpine2-201ENSMUST00000027467 2210 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Tmed1Q3V009 Large2-201ENSMUST00000068586 2445 ntAPPRIS P3 TSL 1 (best) BASIC15.13■□□□□ 0.01
Tmed1Q3V009 Gm2788-204ENSMUST00000209288 1966 ntTSL 5 BASIC15.13■□□□□ 0.01
Tmed1Q3V009 Acbd5-203ENSMUST00000114526 3725 ntAPPRIS P4 TSL 1 (best) BASIC15.13■□□□□ 0.01
Tmed1Q3V009 Tspan11-201ENSMUST00000032501 5188 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Retrieved 100 of 76,532 protein–RNA pairs in 17.8 ms