Protein–RNA interactions for Protein: Q3UMQ8

Naf1, H/ACA ribonucleoprotein complex non-core subunit NAF1, mousemouse

Predictions only

Length 489 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Naf1Q3UMQ8 Col13a1-203ENSMUST00000105452 3037 ntAPPRIS ALT2 TSL 5 BASIC15.6■□□□□ 0.09
Naf1Q3UMQ8 Neu4-202ENSMUST00000190212 1719 ntAPPRIS ALT2 TSL 1 (best) BASIC15.6■□□□□ 0.09
Naf1Q3UMQ8 Asap2-201ENSMUST00000050990 3345 ntAPPRIS ALT2 TSL 5 BASIC15.6■□□□□ 0.09
Naf1Q3UMQ8 Cachd1-202ENSMUST00000097955 4277 ntAPPRIS ALT2 TSL 1 (best) BASIC15.6■□□□□ 0.09
Naf1Q3UMQ8 Fhl1-201ENSMUST00000023854 2356 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
Naf1Q3UMQ8 Specc1-210ENSMUST00000201723 2690 ntTSL 5 BASIC15.6■□□□□ 0.09
Naf1Q3UMQ8 0610010K14Rik-204ENSMUST00000102569 778 ntAPPRIS P3 TSL 1 (best) BASIC15.6■□□□□ 0.09
Naf1Q3UMQ8 Rpl13-ps5-201ENSMUST00000117813 630 ntBASIC15.6■□□□□ 0.09
Naf1Q3UMQ8 Prss45-202ENSMUST00000146794 1208 ntAPPRIS ALT2 TSL 1 (best) BASIC15.6■□□□□ 0.09
Naf1Q3UMQ8 Gm13849-201ENSMUST00000153328 835 ntTSL 5 BASIC15.6■□□□□ 0.09
Naf1Q3UMQ8 1600014C10Rik-207ENSMUST00000179503 784 ntTSL 5 BASIC15.6■□□□□ 0.09
Naf1Q3UMQ8 Gm44596-201ENSMUST00000204223 647 ntAPPRIS P1 TSL 5 BASIC15.6■□□□□ 0.09
Naf1Q3UMQ8 Fam71e1-204ENSMUST00000205422 366 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
Naf1Q3UMQ8 Slc9a6-202ENSMUST00000114784 4449 ntTSL 5 BASIC15.6■□□□□ 0.09
Naf1Q3UMQ8 Gm5648-201ENSMUST00000122244 1587 ntBASIC15.6■□□□□ 0.09
Naf1Q3UMQ8 Dhfr-201ENSMUST00000022218 5347 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Naf1Q3UMQ8 Zbtb2-201ENSMUST00000100077 3086 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Naf1Q3UMQ8 Ssu2-201ENSMUST00000060847 1321 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Naf1Q3UMQ8 Pspc1-202ENSMUST00000163924 2863 ntAPPRIS ALT2 TSL 1 (best) BASIC15.6■□□□□ 0.09
Naf1Q3UMQ8 Rasgrp2-208ENSMUST00000113476 2296 ntAPPRIS P1 TSL 5 BASIC15.6■□□□□ 0.09
Naf1Q3UMQ8 Zc3h14-204ENSMUST00000110105 3514 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Naf1Q3UMQ8 Tmtc4-204ENSMUST00000126867 2952 ntAPPRIS P1 TSL 5 BASIC15.6■□□□□ 0.09
Naf1Q3UMQ8 Zpr1-206ENSMUST00000156440 2984 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Naf1Q3UMQ8 Epor-201ENSMUST00000006397 1761 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Naf1Q3UMQ8 Ckap4-201ENSMUST00000053871 3089 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Naf1Q3UMQ8 Fuz-213ENSMUST00000209039 1453 ntTSL 5 BASIC15.59■□□□□ 0.09
Naf1Q3UMQ8 Dlgap1-207ENSMUST00000133983 7173 ntAPPRIS ALT2 TSL 1 (best) BASIC15.59■□□□□ 0.09
Naf1Q3UMQ8 Txnrd2-215ENSMUST00000206151 2874 ntAPPRIS P2 TSL 5 BASIC15.59■□□□□ 0.09
Naf1Q3UMQ8 Gjb1-202ENSMUST00000119080 1513 ntAPPRIS P1 TSL 3 BASIC15.59■□□□□ 0.09
Naf1Q3UMQ8 Cr1l-208ENSMUST00000194111 1501 ntAPPRIS ALT2 TSL 1 (best) BASIC15.59■□□□□ 0.09
Naf1Q3UMQ8 Elp6-201ENSMUST00000068071 2219 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
Naf1Q3UMQ8 Slc33a1-203ENSMUST00000161659 2554 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Naf1Q3UMQ8 Tbc1d10b-201ENSMUST00000120705 3614 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Naf1Q3UMQ8 Gm14722-201ENSMUST00000118943 689 ntBASIC15.59■□□□□ 0.09
Naf1Q3UMQ8 Dusp3-205ENSMUST00000143177 391 ntTSL 3 BASIC15.59■□□□□ 0.09
Naf1Q3UMQ8 1500015A07Rik-203ENSMUST00000184678 890 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
Naf1Q3UMQ8 Gm44492-201ENSMUST00000197012 141 ntBASIC15.59■□□□□ 0.09
Naf1Q3UMQ8 Msantd1-204ENSMUST00000212362 798 ntAPPRIS ALT2 TSL 5 BASIC15.59■□□□□ 0.09
Naf1Q3UMQ8 Higd1a-206ENSMUST00000215300 605 ntAPPRIS P1 TSL 3 BASIC15.59■□□□□ 0.09
Naf1Q3UMQ8 Tspyl-ps-201ENSMUST00000220692 1117 ntBASIC15.59■□□□□ 0.09
Naf1Q3UMQ8 Gm18246-201ENSMUST00000221023 728 ntBASIC15.59■□□□□ 0.09
Naf1Q3UMQ8 AC154572.2-201ENSMUST00000225105 997 ntBASIC15.59■□□□□ 0.09
Naf1Q3UMQ8 Spr-201ENSMUST00000045986 1230 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Naf1Q3UMQ8 Tspo-201ENSMUST00000047419 837 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Naf1Q3UMQ8 Slc35a1-201ENSMUST00000029970 2039 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Naf1Q3UMQ8 Gramd4-204ENSMUST00000138134 4292 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
Naf1Q3UMQ8 Tcta-201ENSMUST00000044725 1668 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
Naf1Q3UMQ8 Mid1-206ENSMUST00000112107 3194 ntTSL 5 BASIC15.59■□□□□ 0.09
Naf1Q3UMQ8 Rb1-201ENSMUST00000022701 4656 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Naf1Q3UMQ8 Fam214a-202ENSMUST00000170846 4355 ntAPPRIS ALT2 TSL 5 BASIC15.59■□□□□ 0.09
Naf1Q3UMQ8 BC024978-204ENSMUST00000179391 1748 ntAPPRIS P3 TSL 5 BASIC15.59■□□□□ 0.09
Naf1Q3UMQ8 Ythdc2-201ENSMUST00000037763 7215 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Naf1Q3UMQ8 Exoc8-201ENSMUST00000098312 4598 ntAPPRIS P1 BASIC15.59■□□□□ 0.09
Naf1Q3UMQ8 Zkscan3-208ENSMUST00000224820 5398 ntBASIC15.59■□□□□ 0.09
Naf1Q3UMQ8 Prkag2-203ENSMUST00000114975 2205 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Naf1Q3UMQ8 Fam71a-201ENSMUST00000171798 2234 ntAPPRIS P1 BASIC15.59■□□□□ 0.09
Naf1Q3UMQ8 Kif17-204ENSMUST00000105821 2271 ntAPPRIS ALT2 TSL 1 (best) BASIC15.59■□□□□ 0.09
Naf1Q3UMQ8 Six3os1-212ENSMUST00000177220 5601 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
Naf1Q3UMQ8 Keap1-201ENSMUST00000049567 3172 ntAPPRIS P2 TSL 1 (best) BASIC15.59■□□□□ 0.09
Naf1Q3UMQ8 Fam169b-201ENSMUST00000098378 2776 ntTSL 5 BASIC15.58■□□□□ 0.09
Naf1Q3UMQ8 Rabep1-201ENSMUST00000076270 5408 ntAPPRIS P2 TSL 1 (best) BASIC15.58■□□□□ 0.09
Naf1Q3UMQ8 Mib1-201ENSMUST00000052838 10231 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.09
Naf1Q3UMQ8 Lmna-202ENSMUST00000036252 1536 ntTSL 1 (best) BASIC15.58■□□□□ 0.09
Naf1Q3UMQ8 Majin-202ENSMUST00000113528 1562 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.09
Naf1Q3UMQ8 Emx2-201ENSMUST00000062216 2916 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.09
Naf1Q3UMQ8 Celf1-201ENSMUST00000005643 4830 ntAPPRIS P4 TSL 5 BASIC15.58■□□□□ 0.09
Naf1Q3UMQ8 Vmn1r17-204ENSMUST00000228294 2084 ntAPPRIS ALT2 BASIC15.58■□□□□ 0.09
Naf1Q3UMQ8 Serf2-204ENSMUST00000139253 3056 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
Naf1Q3UMQ8 4933415F23Rik-201ENSMUST00000073179 1781 ntAPPRIS P1 BASIC15.58■□□□□ 0.08
Naf1Q3UMQ8 Edn3-203ENSMUST00000140908 731 ntAPPRIS ALT2 TSL 5 BASIC15.58■□□□□ 0.08
Naf1Q3UMQ8 Ndufa1-201ENSMUST00000016571 419 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
Naf1Q3UMQ8 Gm5177-201ENSMUST00000183092 997 ntBASIC15.58■□□□□ 0.08
Naf1Q3UMQ8 Gm45747-201ENSMUST00000212203 999 ntBASIC15.58■□□□□ 0.08
Naf1Q3UMQ8 2010107E04Rik-203ENSMUST00000222874 612 ntAPPRIS P1 TSL 2 BASIC15.58■□□□□ 0.08
Naf1Q3UMQ8 Ndufaf2-202ENSMUST00000223734 556 ntBASIC15.58■□□□□ 0.08
Naf1Q3UMQ8 1700080E11Rik-201ENSMUST00000035180 883 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
Naf1Q3UMQ8 Ly6d-201ENSMUST00000040404 744 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
Naf1Q3UMQ8 Gm15500-202ENSMUST00000071641 1019 ntBASIC15.58■□□□□ 0.08
Naf1Q3UMQ8 Syf2-201ENSMUST00000030622 1369 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
Naf1Q3UMQ8 H6pd-201ENSMUST00000030830 4745 ntAPPRIS P3 TSL 1 (best) BASIC15.58■□□□□ 0.08
Naf1Q3UMQ8 Camk2b-205ENSMUST00000093355 1973 ntTSL 5 BASIC15.58■□□□□ 0.08
Naf1Q3UMQ8 Nipa2-201ENSMUST00000032635 3197 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
Naf1Q3UMQ8 Fam103a1-201ENSMUST00000042166 1452 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
Naf1Q3UMQ8 Arl4c-202ENSMUST00000159814 3997 ntAPPRIS P1 BASIC15.58■□□□□ 0.08
Naf1Q3UMQ8 Camsap3-201ENSMUST00000057028 4450 ntAPPRIS P3 TSL 1 (best) BASIC15.57■□□□□ 0.08
Naf1Q3UMQ8 March8-201ENSMUST00000079012 4450 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Naf1Q3UMQ8 A230060F14Rik-202ENSMUST00000190739 1889 ntBASIC15.57■□□□□ 0.08
Naf1Q3UMQ8 Gnal-201ENSMUST00000025402 5616 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
Naf1Q3UMQ8 Arhgef2-202ENSMUST00000107510 4390 ntAPPRIS ALT2 TSL 1 (best) BASIC15.57■□□□□ 0.08
Naf1Q3UMQ8 Rhox2h-201ENSMUST00000115162 779 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Naf1Q3UMQ8 Gm11453-201ENSMUST00000117318 1007 ntBASIC15.57■□□□□ 0.08
Naf1Q3UMQ8 Gm16151-201ENSMUST00000129696 639 ntTSL 3 BASIC15.57■□□□□ 0.08
Naf1Q3UMQ8 Slc7a10-203ENSMUST00000135452 629 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
Naf1Q3UMQ8 Rbmx-206ENSMUST00000143310 1296 ntTSL 5 BASIC15.57■□□□□ 0.08
Naf1Q3UMQ8 Emp3-202ENSMUST00000164119 784 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Naf1Q3UMQ8 Gm27244-201ENSMUST00000184260 380 ntTSL 5 BASIC15.57■□□□□ 0.08
Naf1Q3UMQ8 Gm44662-201ENSMUST00000206970 412 ntTSL 5 BASIC15.57■□□□□ 0.08
Naf1Q3UMQ8 Gm45208-202ENSMUST00000208156 1153 ntAPPRIS P1 TSL 5 BASIC15.57■□□□□ 0.08
Naf1Q3UMQ8 Gm45231-201ENSMUST00000208629 1064 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
Naf1Q3UMQ8 Stum-205ENSMUST00000211561 1063 ntAPPRIS ALT1 TSL 5 BASIC15.57■□□□□ 0.08
Retrieved 100 of 76,532 protein–RNA pairs in 23.4 ms