Protein–RNA interactions for Protein: Q3UJB0

Sf3b2, Splicing factor 3b, subunit 2, mousemouse

Known RBP Predictions only

Length 878 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sf3b2Q3UJB0 Max-202ENSMUST00000110395 1942 ntAPPRIS P3 TSL 1 (best) BASIC19.74■□□□□ 0.75
Sf3b2Q3UJB0 Rnf157-202ENSMUST00000106398 4553 ntAPPRIS ALT2 TSL 5 BASIC19.74■□□□□ 0.75
Sf3b2Q3UJB0 Gm13337-201ENSMUST00000119183 1594 ntBASIC19.74■□□□□ 0.75
Sf3b2Q3UJB0 Sppl3-201ENSMUST00000031530 3204 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Sf3b2Q3UJB0 Fam131b-203ENSMUST00000143278 4104 ntAPPRIS P3 TSL 1 (best) BASIC19.74■□□□□ 0.75
Sf3b2Q3UJB0 Pou3f2-201ENSMUST00000178174 5587 ntAPPRIS P1 BASIC19.73■□□□□ 0.75
Sf3b2Q3UJB0 Gm4219-201ENSMUST00000168140 2143 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
Sf3b2Q3UJB0 Dpy19l1-203ENSMUST00000142064 3489 ntAPPRIS P1 TSL 5 BASIC19.73■□□□□ 0.75
Sf3b2Q3UJB0 Zbtb24-201ENSMUST00000080771 2844 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Sf3b2Q3UJB0 Prkcz2-201ENSMUST00000206136 1756 ntBASIC19.73■□□□□ 0.75
Sf3b2Q3UJB0 Arl6ip1-201ENSMUST00000032888 2171 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Sf3b2Q3UJB0 B230359F08Rik-201ENSMUST00000103671 426 ntAPPRIS P1 BASIC19.73■□□□□ 0.75
Sf3b2Q3UJB0 Pcgf1-202ENSMUST00000165164 918 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Sf3b2Q3UJB0 Commd6-203ENSMUST00000168587 519 ntAPPRIS ALT2 TSL 1 (best) BASIC19.73■□□□□ 0.75
Sf3b2Q3UJB0 4930592C13Rik-201ENSMUST00000196791 661 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
Sf3b2Q3UJB0 Gm43568-203ENSMUST00000199116 1270 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
Sf3b2Q3UJB0 CT010506.4-201ENSMUST00000225457 351 ntBASIC19.73■□□□□ 0.75
Sf3b2Q3UJB0 Vps25-202ENSMUST00000042477 1106 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Sf3b2Q3UJB0 Srd5a2-201ENSMUST00000043458 854 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Sf3b2Q3UJB0 Mrps21-202ENSMUST00000072587 405 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Sf3b2Q3UJB0 Shroom3-204ENSMUST00000168878 5630 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
Sf3b2Q3UJB0 Cacna1h-205ENSMUST00000159610 8230 ntAPPRIS ALT2 TSL 1 (best) BASIC19.73■□□□□ 0.75
Sf3b2Q3UJB0 Gm42466-201ENSMUST00000202099 1301 ntBASIC19.73■□□□□ 0.75
Sf3b2Q3UJB0 Gm10044-201ENSMUST00000081331 1312 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
Sf3b2Q3UJB0 Ddx39-202ENSMUST00000109810 1794 ntAPPRIS P1 TSL 5 BASIC19.72■□□□□ 0.75
Sf3b2Q3UJB0 Gm10561-201ENSMUST00000181563 1943 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
Sf3b2Q3UJB0 Dnase1l2-201ENSMUST00000088506 1921 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Sf3b2Q3UJB0 Gm16401-202ENSMUST00000197463 2074 ntBASIC19.72■□□□□ 0.75
Sf3b2Q3UJB0 Bmp2k-201ENSMUST00000035635 7387 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Sf3b2Q3UJB0 Mtmr3-202ENSMUST00000109943 5674 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Sf3b2Q3UJB0 Klhl40-201ENSMUST00000098272 2370 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Sf3b2Q3UJB0 Art3-205ENSMUST00000120193 1371 ntAPPRIS ALT2 TSL 1 (best) BASIC19.72■□□□□ 0.75
Sf3b2Q3UJB0 Gm16759-204ENSMUST00000191455 4272 ntTSL 5 BASIC19.72■□□□□ 0.75
Sf3b2Q3UJB0 Lenep-201ENSMUST00000057431 1806 ntAPPRIS P1 BASIC19.72■□□□□ 0.75
Sf3b2Q3UJB0 Fam46a-202ENSMUST00000187711 5648 ntAPPRIS ALT2 TSL 1 (best) BASIC19.72■□□□□ 0.75
Sf3b2Q3UJB0 Coq8b-202ENSMUST00000108378 2276 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Sf3b2Q3UJB0 Tnrc6c-202ENSMUST00000106344 8847 ntAPPRIS P1 TSL 5 BASIC19.72■□□□□ 0.75
Sf3b2Q3UJB0 Fbxo24-202ENSMUST00000111002 2306 ntTSL 5 BASIC19.72■□□□□ 0.75
Sf3b2Q3UJB0 Gm13134-202ENSMUST00000144347 387 ntTSL 2 BASIC19.72■□□□□ 0.75
Sf3b2Q3UJB0 Gm11682-201ENSMUST00000144689 516 ntTSL 3 BASIC19.72■□□□□ 0.75
Sf3b2Q3UJB0 Tmem176b-203ENSMUST00000166247 1414 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Sf3b2Q3UJB0 Pcbp3-206ENSMUST00000168465 1748 ntAPPRIS P3 TSL 5 BASIC19.72■□□□□ 0.75
Sf3b2Q3UJB0 Gm45195-201ENSMUST00000205597 1008 ntBASIC19.72■□□□□ 0.75
Sf3b2Q3UJB0 Shd-206ENSMUST00000225145 998 ntBASIC19.72■□□□□ 0.75
Sf3b2Q3UJB0 Ifitm3-201ENSMUST00000026565 678 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Sf3b2Q3UJB0 Xrcc6-202ENSMUST00000100399 3296 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Sf3b2Q3UJB0 Zfp358-203ENSMUST00000208423 2200 ntAPPRIS P1 BASIC19.72■□□□□ 0.75
Sf3b2Q3UJB0 Plcl1-201ENSMUST00000042986 6580 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Sf3b2Q3UJB0 Ldb3-207ENSMUST00000227819 1499 ntBASIC19.72■□□□□ 0.75
Sf3b2Q3UJB0 Sectm1a-203ENSMUST00000106119 1302 ntAPPRIS ALT2 TSL 1 (best) BASIC19.72■□□□□ 0.75
Sf3b2Q3UJB0 Gtdc1-202ENSMUST00000100127 2422 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
Sf3b2Q3UJB0 Sri-205ENSMUST00000148633 2251 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Sf3b2Q3UJB0 Hirip3-201ENSMUST00000037248 2766 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Sf3b2Q3UJB0 Bmi1-201ENSMUST00000028071 3594 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Sf3b2Q3UJB0 Ush1c-208ENSMUST00000177212 1696 ntAPPRIS ALT2 TSL 5 BASIC19.71■□□□□ 0.75
Sf3b2Q3UJB0 Gale-201ENSMUST00000102540 1537 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Sf3b2Q3UJB0 Gas1-201ENSMUST00000065086 2961 ntAPPRIS ALT2 BASIC19.71■□□□□ 0.75
Sf3b2Q3UJB0 Luc7l2-208ENSMUST00000161538 4253 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
Sf3b2Q3UJB0 Afg1l-201ENSMUST00000041024 2513 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Sf3b2Q3UJB0 Diaph1-205ENSMUST00000115634 5666 ntAPPRIS P3 TSL 5 BASIC19.71■□□□□ 0.75
Sf3b2Q3UJB0 Prrx2-202ENSMUST00000113592 1070 ntAPPRIS ALT2 TSL 1 (best) BASIC19.71■□□□□ 0.75
Sf3b2Q3UJB0 Gm16000-201ENSMUST00000146657 447 ntTSL 2 BASIC19.71■□□□□ 0.75
Sf3b2Q3UJB0 Poc1a-205ENSMUST00000191434 1242 ntAPPRIS ALT2 TSL 1 (best) BASIC19.71■□□□□ 0.75
Sf3b2Q3UJB0 Gm42612-201ENSMUST00000197986 623 ntBASIC19.71■□□□□ 0.75
Sf3b2Q3UJB0 Gm43170-201ENSMUST00000199827 612 ntBASIC19.71■□□□□ 0.75
Sf3b2Q3UJB0 Isca2-201ENSMUST00000021667 883 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Sf3b2Q3UJB0 AC090659.2-201ENSMUST00000225378 1186 ntBASIC19.71■□□□□ 0.75
Sf3b2Q3UJB0 Gm15823-201ENSMUST00000064305 670 ntBASIC19.71■□□□□ 0.75
Sf3b2Q3UJB0 Akr1b7-201ENSMUST00000007449 1281 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Sf3b2Q3UJB0 Gm10244-201ENSMUST00000090237 830 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
Sf3b2Q3UJB0 Atp5a1-201ENSMUST00000026495 2471 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Sf3b2Q3UJB0 Grm4-201ENSMUST00000118161 4537 ntAPPRIS P1 TSL 5 BASIC19.71■□□□□ 0.75
Sf3b2Q3UJB0 Slc35g3-201ENSMUST00000102586 1618 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Sf3b2Q3UJB0 2310011J03Rik-201ENSMUST00000020341 1649 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Sf3b2Q3UJB0 Lat2-201ENSMUST00000036362 1637 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Sf3b2Q3UJB0 Crem-234ENSMUST00000154470 1996 ntTSL 5 BASIC19.71■□□□□ 0.75
Sf3b2Q3UJB0 Cep135-202ENSMUST00000121979 5537 ntAPPRIS P1 TSL 5 BASIC19.71■□□□□ 0.75
Sf3b2Q3UJB0 Fbrsl1-202ENSMUST00000069483 4720 ntAPPRIS P2 TSL 5 BASIC19.71■□□□□ 0.75
Sf3b2Q3UJB0 Mettl7a1-201ENSMUST00000067752 1883 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Sf3b2Q3UJB0 Cxcr3-201ENSMUST00000056614 1731 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Sf3b2Q3UJB0 Ube3c-201ENSMUST00000049453 5048 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Sf3b2Q3UJB0 Myo9b-206ENSMUST00000212935 6316 ntAPPRIS ALT2 TSL 5 BASIC19.7■□□□□ 0.74
Sf3b2Q3UJB0 Gm45774-201ENSMUST00000211992 2665 ntBASIC19.7■□□□□ 0.74
Sf3b2Q3UJB0 Vps37a-201ENSMUST00000098817 6379 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Sf3b2Q3UJB0 Slc5a10-203ENSMUST00000148584 2049 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Sf3b2Q3UJB0 Cdv3-202ENSMUST00000072249 3787 ntAPPRIS ALT2 TSL 1 (best) BASIC19.7■□□□□ 0.74
Sf3b2Q3UJB0 Wdtc1-201ENSMUST00000043305 4191 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Sf3b2Q3UJB0 Mex3a-201ENSMUST00000172699 5778 ntAPPRIS P1 TSL 2 BASIC19.7■□□□□ 0.74
Sf3b2Q3UJB0 Hcrt-202ENSMUST00000107360 509 ntTSL 5 BASIC19.7■□□□□ 0.74
Sf3b2Q3UJB0 Cd63-ps-201ENSMUST00000145417 875 ntBASIC19.7■□□□□ 0.74
Sf3b2Q3UJB0 Klk2-ps-201ENSMUST00000205342 571 ntBASIC19.7■□□□□ 0.74
Sf3b2Q3UJB0 Gm45668-201ENSMUST00000211271 493 ntBASIC19.7■□□□□ 0.74
Sf3b2Q3UJB0 Tnfrsf19-205ENSMUST00000225730 744 ntAPPRIS ALT2 BASIC19.7■□□□□ 0.74
Sf3b2Q3UJB0 Ftl1-201ENSMUST00000094434 968 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Sf3b2Q3UJB0 Snap91-201ENSMUST00000036347 4237 ntAPPRIS ALT2 TSL 5 BASIC19.7■□□□□ 0.74
Sf3b2Q3UJB0 Cradd-201ENSMUST00000053594 1661 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Sf3b2Q3UJB0 Eda-209ENSMUST00000113783 4930 ntTSL 5 BASIC19.7■□□□□ 0.74
Sf3b2Q3UJB0 Ankrd22-201ENSMUST00000025686 1766 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Sf3b2Q3UJB0 Pou5f1-201ENSMUST00000025271 1362 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Sf3b2Q3UJB0 Sfrp1-201ENSMUST00000033952 4372 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Retrieved 100 of 76,532 protein–RNA pairs in 42.6 ms