Protein–RNA interactions for Protein: Q3UAW9

Brf2, Transcription factor IIIB 50 kDa subunit, mousemouse

Predictions only

Length 420 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Brf2Q3UAW9 Cyp2ab1-201ENSMUST00000023513 2720 ntTSL 5 BASIC14.48□□□□□ -0.09
Brf2Q3UAW9 Nphp1-201ENSMUST00000028857 2260 ntAPPRIS P3 TSL 1 (best) BASIC14.48□□□□□ -0.09
Brf2Q3UAW9 Slk-202ENSMUST00000051691 4239 ntAPPRIS P3 TSL 1 (best) BASIC14.48□□□□□ -0.09
Brf2Q3UAW9 Rps6ka5-201ENSMUST00000043599 4406 ntAPPRIS P2 TSL 1 (best) BASIC14.48□□□□□ -0.09
Brf2Q3UAW9 Ldha-210ENSMUST00000209984 1815 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
Brf2Q3UAW9 Scaf4-201ENSMUST00000039280 4165 ntAPPRIS P3 TSL 1 (best) BASIC14.48□□□□□ -0.09
Brf2Q3UAW9 Foxl2-201ENSMUST00000051312 3256 ntAPPRIS P1 BASIC14.47□□□□□ -0.09
Brf2Q3UAW9 Tatdn2-205ENSMUST00000204753 2645 ntAPPRIS ALT2 TSL 1 (best) BASIC14.47□□□□□ -0.09
Brf2Q3UAW9 Zfp606-201ENSMUST00000098822 4748 ntAPPRIS P3 TSL 1 (best) BASIC14.47□□□□□ -0.09
Brf2Q3UAW9 Itpkc-201ENSMUST00000003850 3247 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Brf2Q3UAW9 D1Pas1-201ENSMUST00000045108 3212 ntAPPRIS P1 BASIC14.47□□□□□ -0.09
Brf2Q3UAW9 Megf9-202ENSMUST00000107359 7924 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Brf2Q3UAW9 Usp1-201ENSMUST00000030289 3577 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Brf2Q3UAW9 Fyn-201ENSMUST00000063091 3562 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
Brf2Q3UAW9 Supt5-208ENSMUST00000209141 3755 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Brf2Q3UAW9 Slc5a5-201ENSMUST00000000809 2928 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Brf2Q3UAW9 Capn1-201ENSMUST00000025891 3100 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Brf2Q3UAW9 Mapk9-201ENSMUST00000020634 4675 ntAPPRIS P3 TSL 1 (best) BASIC14.47□□□□□ -0.09
Brf2Q3UAW9 Camkv-201ENSMUST00000035700 3277 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Brf2Q3UAW9 9430015G10Rik-208ENSMUST00000169550 2660 ntAPPRIS P1 TSL 5 BASIC14.47□□□□□ -0.09
Brf2Q3UAW9 Ripk3-203ENSMUST00000178399 1865 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
Brf2Q3UAW9 Ntng2-210ENSMUST00000177689 1679 ntAPPRIS ALT2 TSL 5 BASIC14.47□□□□□ -0.09
Brf2Q3UAW9 4921539H07Rik-202ENSMUST00000200072 1665 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
Brf2Q3UAW9 Ctnna2-205ENSMUST00000161846 4018 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
Brf2Q3UAW9 Oaz2-204ENSMUST00000136166 700 ntTSL 5 BASIC14.47□□□□□ -0.09
Brf2Q3UAW9 Tulp3-205ENSMUST00000157005 1053 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
Brf2Q3UAW9 Syne4-208ENSMUST00000176304 1006 ntAPPRIS ALT2 TSL 5 BASIC14.47□□□□□ -0.09
Brf2Q3UAW9 4930445N18Rik-202ENSMUST00000181345 1033 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
Brf2Q3UAW9 Gm19710-202ENSMUST00000200320 493 ntTSL 3 BASIC14.47□□□□□ -0.09
Brf2Q3UAW9 Gm13830-205ENSMUST00000201195 1155 ntBASIC14.47□□□□□ -0.09
Brf2Q3UAW9 Gm38973-201ENSMUST00000206810 878 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
Brf2Q3UAW9 Zfp524-202ENSMUST00000207901 1263 ntAPPRIS P1 TSL 5 BASIC14.47□□□□□ -0.09
Brf2Q3UAW9 Spata33-204ENSMUST00000212346 715 ntTSL 2 BASIC14.47□□□□□ -0.09
Brf2Q3UAW9 Slc35d2-204ENSMUST00000222168 472 ntTSL 3 BASIC14.47□□□□□ -0.09
Brf2Q3UAW9 Rbfox2-207ENSMUST00000227533 1041 ntBASIC14.47□□□□□ -0.09
Brf2Q3UAW9 AC159093.1-201ENSMUST00000227779 380 ntBASIC14.47□□□□□ -0.09
Brf2Q3UAW9 Tcf3-204ENSMUST00000105340 2826 ntAPPRIS ALT2 TSL 1 (best) BASIC14.47□□□□□ -0.09
Brf2Q3UAW9 Tcf3-202ENSMUST00000020379 2829 ntAPPRIS ALT2 TSL 1 (best) BASIC14.47□□□□□ -0.09
Brf2Q3UAW9 Efnb3-201ENSMUST00000004036 3183 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Brf2Q3UAW9 Tbc1d30-201ENSMUST00000064107 5695 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Brf2Q3UAW9 Rfc5-201ENSMUST00000086461 2796 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Brf2Q3UAW9 Cyp11b2-201ENSMUST00000167634 1625 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Brf2Q3UAW9 Zkscan3-202ENSMUST00000116433 1421 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
Brf2Q3UAW9 Rarg-202ENSMUST00000063339 2718 ntAPPRIS ALT2 TSL 1 (best) BASIC14.47□□□□□ -0.09
Brf2Q3UAW9 Zfp422-203ENSMUST00000112880 2523 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Brf2Q3UAW9 St6galnac2-201ENSMUST00000079545 3643 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Brf2Q3UAW9 Raet1e-204ENSMUST00000181645 1579 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Brf2Q3UAW9 Cep170b-211ENSMUST00000222711 6566 ntAPPRIS P1 TSL 5 BASIC14.47□□□□□ -0.09
Brf2Q3UAW9 Ovca2-201ENSMUST00000071562 2670 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Brf2Q3UAW9 D10Jhu81e-201ENSMUST00000001242 1378 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Brf2Q3UAW9 Ift74-202ENSMUST00000107104 1713 ntTSL 2 BASIC14.46□□□□□ -0.09
Brf2Q3UAW9 Fam53b-203ENSMUST00000097999 5465 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Brf2Q3UAW9 Pqlc2-201ENSMUST00000053862 1532 ntAPPRIS P2 TSL 1 (best) BASIC14.46□□□□□ -0.09
Brf2Q3UAW9 Nrsn1-204ENSMUST00000167305 1891 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Brf2Q3UAW9 Ecm1-201ENSMUST00000029753 1894 ntAPPRIS ALT2 TSL 1 (best) BASIC14.46□□□□□ -0.09
Brf2Q3UAW9 G2e3-202ENSMUST00000119211 2926 ntAPPRIS ALT2 TSL 1 (best) BASIC14.46□□□□□ -0.09
Brf2Q3UAW9 Tead1-201ENSMUST00000059768 9964 ntAPPRIS P4 TSL 1 (best) BASIC14.46□□□□□ -0.09
Brf2Q3UAW9 Slc35e4-202ENSMUST00000109995 3063 ntAPPRIS ALT1 TSL 5 BASIC14.46□□□□□ -0.09
Brf2Q3UAW9 Slc35e4-201ENSMUST00000051207 3059 ntAPPRIS P2 TSL 1 (best) BASIC14.46□□□□□ -0.09
Brf2Q3UAW9 Clstn1-202ENSMUST00000105691 4459 ntAPPRIS ALT2 TSL 1 (best) BASIC14.46□□□□□ -0.09
Brf2Q3UAW9 Tmem108-204ENSMUST00000189588 2850 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Brf2Q3UAW9 Fam69c-201ENSMUST00000052501 2153 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Brf2Q3UAW9 Gm26613-201ENSMUST00000180919 1457 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
Brf2Q3UAW9 Foxo3-203ENSMUST00000105502 6848 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Brf2Q3UAW9 Lhpp-201ENSMUST00000033241 1612 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Brf2Q3UAW9 Zbed5-201ENSMUST00000041466 2492 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Brf2Q3UAW9 Rnf207-201ENSMUST00000076183 2466 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Brf2Q3UAW9 Zkscan8-202ENSMUST00000110481 728 ntTSL 2 BASIC14.46□□□□□ -0.09
Brf2Q3UAW9 Gm16183-201ENSMUST00000127527 1193 ntTSL 5 BASIC14.46□□□□□ -0.09
Brf2Q3UAW9 Rasl2-9-201ENSMUST00000147835 1013 ntAPPRIS P1 BASIC14.46□□□□□ -0.09
Brf2Q3UAW9 Ankrd23-204ENSMUST00000194853 1073 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
Brf2Q3UAW9 Piga-208ENSMUST00000208697 947 ntTSL 5 BASIC14.46□□□□□ -0.09
Brf2Q3UAW9 AC160338.1-201ENSMUST00000214232 705 ntBASIC14.46□□□□□ -0.09
Brf2Q3UAW9 AC093926.2-201ENSMUST00000214468 1228 ntBASIC14.46□□□□□ -0.09
Brf2Q3UAW9 Rfc4-201ENSMUST00000023598 1228 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Brf2Q3UAW9 Gm5617-201ENSMUST00000048824 531 ntAPPRIS P1 BASIC14.46□□□□□ -0.09
Brf2Q3UAW9 Adamts20-201ENSMUST00000035342 6027 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Brf2Q3UAW9 Arid3a-203ENSMUST00000105377 4952 ntAPPRIS ALT2 TSL 1 (best) BASIC14.46□□□□□ -0.09
Brf2Q3UAW9 Bcl7b-203ENSMUST00000111188 1434 ntAPPRIS ALT1 TSL 5 BASIC14.46□□□□□ -0.09
Brf2Q3UAW9 Tm6sf2-201ENSMUST00000049197 1418 ntAPPRIS P3 TSL 1 (best) BASIC14.46□□□□□ -0.09
Brf2Q3UAW9 Gtdc1-202ENSMUST00000100127 2422 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
Brf2Q3UAW9 Syt6-201ENSMUST00000090697 4416 ntAPPRIS P1 TSL 5 BASIC14.46□□□□□ -0.09
Brf2Q3UAW9 Frmd5-207ENSMUST00000138157 4230 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
Brf2Q3UAW9 Agbl3-204ENSMUST00000115016 3734 ntAPPRIS ALT2 TSL 1 (best) BASIC14.46□□□□□ -0.09
Brf2Q3UAW9 Tcp11-202ENSMUST00000043925 1746 ntAPPRIS ALT2 TSL 5 BASIC14.46□□□□□ -0.1
Brf2Q3UAW9 Aaed1-207ENSMUST00000222570 3011 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.1
Brf2Q3UAW9 Errfi1-201ENSMUST00000030811 3043 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.1
Brf2Q3UAW9 Id4-201ENSMUST00000021810 3849 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.1
Brf2Q3UAW9 Rtn3-201ENSMUST00000025667 2841 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.1
Brf2Q3UAW9 Plxnb1-201ENSMUST00000072093 8649 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.1
Brf2Q3UAW9 Ldlrap1-201ENSMUST00000037828 6549 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.1
Brf2Q3UAW9 Otol1-201ENSMUST00000053013 2161 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.1
Brf2Q3UAW9 Col7a1-201ENSMUST00000026740 9198 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.1
Brf2Q3UAW9 Gyg-203ENSMUST00000178328 1698 ntAPPRIS P2 TSL 1 (best) BASIC14.46□□□□□ -0.1
Brf2Q3UAW9 Nrcam-202ENSMUST00000110748 6275 ntAPPRIS ALT2 TSL 1 (best) BASIC14.45□□□□□ -0.1
Brf2Q3UAW9 Gfm2-211ENSMUST00000161913 1829 ntTSL 2 BASIC14.45□□□□□ -0.1
Brf2Q3UAW9 Siglece-201ENSMUST00000032667 1849 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Brf2Q3UAW9 Gm36447-201ENSMUST00000201101 1978 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
Brf2Q3UAW9 Abraxas1-202ENSMUST00000055245 2139 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Brf2Q3UAW9 Cables1-202ENSMUST00000171109 3396 ntAPPRIS ALT2 TSL 1 (best) BASIC14.45□□□□□ -0.1
Retrieved 100 of 76,532 protein–RNA pairs in 32.5 ms