Protein–RNA interactions for Protein: Q3TCH7

Cul4a, Cullin-4A, mousemouse

Predictions only

Length 759 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cul4aQ3TCH7 Prss40-201ENSMUST00000047840 1275 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Cul4aQ3TCH7 4930459C07Rik-202ENSMUST00000219638 1805 ntTSL 5 BASIC16.14■□□□□ 0.17
Cul4aQ3TCH7 Gm39027-201ENSMUST00000208560 2942 ntTSL 5 BASIC16.14■□□□□ 0.17
Cul4aQ3TCH7 Impdh1-207ENSMUST00000162099 2580 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Cul4aQ3TCH7 Hsd3b7-202ENSMUST00000106271 1713 ntTSL 5 BASIC16.14■□□□□ 0.17
Cul4aQ3TCH7 Tcf19-202ENSMUST00000160885 1732 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Cul4aQ3TCH7 Jph4-201ENSMUST00000022819 4489 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Cul4aQ3TCH7 Cuedc2-202ENSMUST00000167861 1941 ntAPPRIS P1 TSL 5 BASIC16.13■□□□□ 0.17
Cul4aQ3TCH7 Cspp1-205ENSMUST00000122156 2535 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
Cul4aQ3TCH7 Sybu-203ENSMUST00000110269 2920 ntAPPRIS ALT2 TSL 1 (best) BASIC16.13■□□□□ 0.17
Cul4aQ3TCH7 Mospd2-201ENSMUST00000004715 2015 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Cul4aQ3TCH7 Fam124a-201ENSMUST00000039064 3558 ntAPPRIS P1 TSL 5 BASIC16.13■□□□□ 0.17
Cul4aQ3TCH7 Nkain2-203ENSMUST00000191234 3760 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Cul4aQ3TCH7 BC037032-201ENSMUST00000140003 3974 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
Cul4aQ3TCH7 Prkcz-203ENSMUST00000105624 694 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
Cul4aQ3TCH7 Otx2os1-206ENSMUST00000228153 787 ntBASIC16.13■□□□□ 0.17
Cul4aQ3TCH7 Atp5l-201ENSMUST00000043675 544 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Cul4aQ3TCH7 Npw-201ENSMUST00000095544 638 ntAPPRIS ALT2 TSL 1 (best) BASIC16.13■□□□□ 0.17
Cul4aQ3TCH7 S100a16-202ENSMUST00000098911 1127 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Cul4aQ3TCH7 A230060F14Rik-202ENSMUST00000190739 1889 ntBASIC16.13■□□□□ 0.17
Cul4aQ3TCH7 Nde1-201ENSMUST00000023359 2287 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Cul4aQ3TCH7 Dzip3-201ENSMUST00000114516 3331 ntAPPRIS P3 TSL 1 (best) BASIC16.13■□□□□ 0.17
Cul4aQ3TCH7 Btd-201ENSMUST00000090147 2324 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Cul4aQ3TCH7 Gm26534-201ENSMUST00000181687 1724 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
Cul4aQ3TCH7 Cyp2w1-201ENSMUST00000031521 1512 ntAPPRIS P1 TSL 5 BASIC16.13■□□□□ 0.17
Cul4aQ3TCH7 Ssu2-201ENSMUST00000060847 1321 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Cul4aQ3TCH7 Cdkn1b-201ENSMUST00000003115 2393 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Cul4aQ3TCH7 Plin5-201ENSMUST00000019808 1986 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Cul4aQ3TCH7 Cog8-202ENSMUST00000095517 4476 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Cul4aQ3TCH7 Trmt6-201ENSMUST00000039554 2828 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Cul4aQ3TCH7 Otop3-201ENSMUST00000019006 2422 ntAPPRIS P3 TSL 2 BASIC16.13■□□□□ 0.17
Cul4aQ3TCH7 Lrrc41-201ENSMUST00000030471 3065 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Cul4aQ3TCH7 Polr3d-202ENSMUST00000180358 2032 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Cul4aQ3TCH7 Klhl26-202ENSMUST00000166976 2734 ntTSL 2 BASIC16.12■□□□□ 0.17
Cul4aQ3TCH7 Mapk1ip1-203ENSMUST00000119664 1883 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Cul4aQ3TCH7 Cilp2-201ENSMUST00000057831 4314 ntAPPRIS P1 TSL 5 BASIC16.12■□□□□ 0.17
Cul4aQ3TCH7 Spock1-203ENSMUST00000185905 2794 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
Cul4aQ3TCH7 Sec24a-202ENSMUST00000064297 2104 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
Cul4aQ3TCH7 Zbtb33-202ENSMUST00000115142 2567 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Cul4aQ3TCH7 Rad18-201ENSMUST00000068487 2577 ntAPPRIS ALT2 TSL 1 (best) BASIC16.12■□□□□ 0.17
Cul4aQ3TCH7 Ahctf1-201ENSMUST00000027768 8506 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Cul4aQ3TCH7 9130024F11Rik-202ENSMUST00000185204 2628 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
Cul4aQ3TCH7 Wbp2-202ENSMUST00000106444 1012 ntTSL 2 BASIC16.12■□□□□ 0.17
Cul4aQ3TCH7 Gm29501-201ENSMUST00000186133 530 ntTSL 5 BASIC16.12■□□□□ 0.17
Cul4aQ3TCH7 Gm7506-201ENSMUST00000207758 815 ntBASIC16.12■□□□□ 0.17
Cul4aQ3TCH7 Nthl1-201ENSMUST00000047611 1080 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Cul4aQ3TCH7 Slc25a43-201ENSMUST00000047655 1111 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Cul4aQ3TCH7 Arhgef10l-206ENSMUST00000105799 4508 ntAPPRIS ALT2 TSL 5 BASIC16.12■□□□□ 0.17
Cul4aQ3TCH7 Raet1e-204ENSMUST00000181645 1579 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Cul4aQ3TCH7 Tmem185b-202ENSMUST00000183952 2824 ntAPPRIS P1 BASIC16.12■□□□□ 0.17
Cul4aQ3TCH7 Zmym3-201ENSMUST00000063577 6057 ntAPPRIS P2 TSL 1 (best) BASIC16.12■□□□□ 0.17
Cul4aQ3TCH7 Hspb6-201ENSMUST00000044048 1363 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Cul4aQ3TCH7 Fubp3-201ENSMUST00000055244 3648 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
Cul4aQ3TCH7 Farp2-201ENSMUST00000120301 3937 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Cul4aQ3TCH7 Acp7-201ENSMUST00000040112 1978 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Cul4aQ3TCH7 Pde4d-204ENSMUST00000117879 1724 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
Cul4aQ3TCH7 6430548M08Rik-204ENSMUST00000108951 5531 ntAPPRIS ALT2 TSL 1 (best) BASIC16.11■□□□□ 0.17
Cul4aQ3TCH7 Gm17108-201ENSMUST00000168625 2877 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
Cul4aQ3TCH7 Tmtc4-201ENSMUST00000037726 3416 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Cul4aQ3TCH7 Sirt5-206ENSMUST00000221481 1548 ntTSL 5 BASIC16.11■□□□□ 0.17
Cul4aQ3TCH7 Anks1-201ENSMUST00000025058 6844 ntAPPRIS ALT2 TSL 1 (best) BASIC16.11■□□□□ 0.17
Cul4aQ3TCH7 Pym1-202ENSMUST00000163377 1158 ntAPPRIS P4 TSL 1 (best) BASIC16.11■□□□□ 0.17
Cul4aQ3TCH7 Gm26887-201ENSMUST00000181282 547 ntTSL 5 BASIC16.11■□□□□ 0.17
Cul4aQ3TCH7 Jpx-202ENSMUST00000182447 712 ntTSL 3 BASIC16.11■□□□□ 0.17
Cul4aQ3TCH7 Smim22-208ENSMUST00000185147 399 ntAPPRIS ALT2 TSL 2 BASIC16.11■□□□□ 0.17
Cul4aQ3TCH7 Pmf1-205ENSMUST00000193338 795 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
Cul4aQ3TCH7 Fcnb-201ENSMUST00000028179 1170 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Cul4aQ3TCH7 Vamp8-201ENSMUST00000059983 820 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Cul4aQ3TCH7 Armc9-205ENSMUST00000131412 2160 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Cul4aQ3TCH7 Grk6-207ENSMUST00000225925 2769 ntBASIC16.11■□□□□ 0.17
Cul4aQ3TCH7 Csgalnact2-201ENSMUST00000049344 3661 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Cul4aQ3TCH7 Sgcd-201ENSMUST00000077221 1617 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Cul4aQ3TCH7 Zfp879-202ENSMUST00000109133 2229 ntTSL 5 BASIC16.11■□□□□ 0.17
Cul4aQ3TCH7 Ehd4-201ENSMUST00000028755 3730 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Cul4aQ3TCH7 Tor1aip1-201ENSMUST00000027738 1952 ntAPPRIS P3 TSL 1 (best) BASIC16.11■□□□□ 0.17
Cul4aQ3TCH7 Ch25h-201ENSMUST00000050562 1350 ntAPPRIS P1 BASIC16.11■□□□□ 0.17
Cul4aQ3TCH7 Ttll5-201ENSMUST00000040179 5081 ntAPPRIS P3 TSL 1 (best) BASIC16.11■□□□□ 0.17
Cul4aQ3TCH7 Stk40-202ENSMUST00000116286 3860 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
Cul4aQ3TCH7 Rnaseh2a-203ENSMUST00000109738 2044 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Cul4aQ3TCH7 Lmna-203ENSMUST00000120377 2021 ntAPPRIS ALT2 TSL 1 (best) BASIC16.11■□□□□ 0.17
Cul4aQ3TCH7 Hacd4-201ENSMUST00000030221 2089 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Cul4aQ3TCH7 Zbtb20-202ENSMUST00000114690 2759 ntAPPRIS ALT1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Cul4aQ3TCH7 Vps72-201ENSMUST00000009102 1456 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Cul4aQ3TCH7 Mfsd2a-201ENSMUST00000030408 2151 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Cul4aQ3TCH7 Zfp36l2-201ENSMUST00000060366 3530 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Cul4aQ3TCH7 Fam208a-201ENSMUST00000022450 7590 ntAPPRIS P1 TSL 5 BASIC16.1■□□□□ 0.17
Cul4aQ3TCH7 Map6-203ENSMUST00000122101 3233 ntAPPRIS ALT2 TSL 1 (best) BASIC16.1■□□□□ 0.17
Cul4aQ3TCH7 Dtx3-201ENSMUST00000038217 1944 ntAPPRIS P2 TSL 1 (best) BASIC16.1■□□□□ 0.17
Cul4aQ3TCH7 Mis12-201ENSMUST00000048807 3003 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Cul4aQ3TCH7 Grn-201ENSMUST00000049460 2340 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Cul4aQ3TCH7 Zxdc-202ENSMUST00000075117 4126 ntAPPRIS P3 TSL 1 (best) BASIC16.1■□□□□ 0.17
Cul4aQ3TCH7 Nxt1-202ENSMUST00000109961 1116 ntAPPRIS P1 TSL 2 BASIC16.1■□□□□ 0.17
Cul4aQ3TCH7 Fam3a-203ENSMUST00000114139 931 ntTSL 5 BASIC16.1■□□□□ 0.17
Cul4aQ3TCH7 Senp1-204ENSMUST00000180657 3806 ntAPPRIS ALT2 TSL 1 (best) BASIC16.1■□□□□ 0.17
Cul4aQ3TCH7 Washc3-203ENSMUST00000182183 838 ntAPPRIS ALT2 TSL 2 BASIC16.1■□□□□ 0.17
Cul4aQ3TCH7 Hist1h2bc-201ENSMUST00000018246 1156 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Cul4aQ3TCH7 D530033B14Rik-201ENSMUST00000205412 546 ntTSL 5 BASIC16.1■□□□□ 0.17
Cul4aQ3TCH7 AC153889.1-201ENSMUST00000219257 330 ntBASIC16.1■□□□□ 0.17
Cul4aQ3TCH7 Upk3a-201ENSMUST00000023070 1106 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Cul4aQ3TCH7 Nxt1-201ENSMUST00000047177 956 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Retrieved 100 of 76,532 protein–RNA pairs in 42.9 ms