Protein–RNA interactions for Protein: Q09XV5

Chd8, Chromodomain-helicase-DNA-binding protein 8, mousemouse

Known RBP Predictions only

Length 2,582 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chd8Q09XV5 Crybb3-204ENSMUST00000119627 828 ntAPPRIS P1 TSL 2 BASIC13.62□□□□□ -0.23
Chd8Q09XV5 Gm14209-201ENSMUST00000154946 462 ntTSL 5 BASIC13.62□□□□□ -0.23
Chd8Q09XV5 Wfdc2-201ENSMUST00000017867 849 ntAPPRIS P2 TSL 1 (best) BASIC13.62□□□□□ -0.23
Chd8Q09XV5 F8a-201ENSMUST00000105111 2505 ntAPPRIS P1 BASIC13.62□□□□□ -0.23
Chd8Q09XV5 Ccdc149-201ENSMUST00000059428 3295 ntAPPRIS P1 TSL 5 BASIC13.62□□□□□ -0.23
Chd8Q09XV5 Ttc39a-201ENSMUST00000064129 2356 ntAPPRIS P3 TSL 1 (best) BASIC13.62□□□□□ -0.23
Chd8Q09XV5 Pomp-201ENSMUST00000031654 1579 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Chd8Q09XV5 Hand1-201ENSMUST00000036917 1904 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Chd8Q09XV5 Wipf3-204ENSMUST00000132855 4516 ntAPPRIS P4 TSL 5 BASIC13.62□□□□□ -0.23
Chd8Q09XV5 Mios-201ENSMUST00000040017 3710 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Chd8Q09XV5 Plxdc2-203ENSMUST00000114703 2061 ntTSL 5 BASIC13.62□□□□□ -0.23
Chd8Q09XV5 Ksr1-201ENSMUST00000018478 5495 ntAPPRIS P1 TSL 5 BASIC13.62□□□□□ -0.23
Chd8Q09XV5 Gid8-201ENSMUST00000029090 1655 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Chd8Q09XV5 Rbm8a2-201ENSMUST00000104983 1338 ntAPPRIS P1 BASIC13.62□□□□□ -0.23
Chd8Q09XV5 Tmem245-202ENSMUST00000107609 2643 ntAPPRIS P2 TSL 5 BASIC13.62□□□□□ -0.23
Chd8Q09XV5 Stk3-201ENSMUST00000018476 2914 ntAPPRIS P2 TSL 1 (best) BASIC13.62□□□□□ -0.23
Chd8Q09XV5 Mvk-203ENSMUST00000124260 1051 ntTSL 5 BASIC13.62□□□□□ -0.23
Chd8Q09XV5 Gm5523-201ENSMUST00000180415 997 ntBASIC13.62□□□□□ -0.23
Chd8Q09XV5 Gm43947-201ENSMUST00000203019 959 ntBASIC13.62□□□□□ -0.23
Chd8Q09XV5 Ppp1r11-201ENSMUST00000040402 1599 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Chd8Q09XV5 Ppp2r1b-209ENSMUST00000176349 1890 ntAPPRIS ALT2 TSL 5 BASIC13.62□□□□□ -0.23
Chd8Q09XV5 Lhx3-202ENSMUST00000054099 2184 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
Chd8Q09XV5 Armc10-202ENSMUST00000095495 2700 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
Chd8Q09XV5 Gm21949-201ENSMUST00000182006 2369 ntAPPRIS P1 TSL 2 BASIC13.62□□□□□ -0.23
Chd8Q09XV5 N4bp1-201ENSMUST00000034074 6469 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Chd8Q09XV5 Slc16a3-201ENSMUST00000070653 2272 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Chd8Q09XV5 Dhrs4-201ENSMUST00000022821 1392 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Chd8Q09XV5 Stk39-201ENSMUST00000102715 3536 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Chd8Q09XV5 Metap1d-201ENSMUST00000037210 1321 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Chd8Q09XV5 Phlpp1-201ENSMUST00000061047 6226 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Chd8Q09XV5 Tnfrsf18-202ENSMUST00000103173 1189 ntAPPRIS P4 TSL 1 (best) BASIC13.61□□□□□ -0.23
Chd8Q09XV5 Gm12749-201ENSMUST00000122138 1159 ntBASIC13.61□□□□□ -0.23
Chd8Q09XV5 Gm11592-201ENSMUST00000133160 637 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
Chd8Q09XV5 Mir6979-201ENSMUST00000183927 56 ntBASIC13.61□□□□□ -0.23
Chd8Q09XV5 Srgn-201ENSMUST00000020271 938 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Chd8Q09XV5 Rps4l-202ENSMUST00000204242 789 ntBASIC13.61□□□□□ -0.23
Chd8Q09XV5 Slc22a16-202ENSMUST00000078314 2269 ntAPPRIS P2 TSL 1 (best) BASIC13.61□□□□□ -0.23
Chd8Q09XV5 Uso1-204ENSMUST00000202155 3707 ntAPPRIS ALT2 TSL 1 (best) BASIC13.61□□□□□ -0.23
Chd8Q09XV5 Rasl10b-204ENSMUST00000175848 3249 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
Chd8Q09XV5 Dhx32-203ENSMUST00000106139 2233 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
Chd8Q09XV5 Git2-215ENSMUST00000178440 4944 ntTSL 5 BASIC13.61□□□□□ -0.23
Chd8Q09XV5 Git2-201ENSMUST00000043283 4938 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
Chd8Q09XV5 Zfp668-202ENSMUST00000106261 2410 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Chd8Q09XV5 Anapc5-203ENSMUST00000196640 2422 ntAPPRIS ALT2 TSL 1 (best) BASIC13.61□□□□□ -0.23
Chd8Q09XV5 Erc1-202ENSMUST00000079582 2304 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
Chd8Q09XV5 Gm20482-201ENSMUST00000172746 1644 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
Chd8Q09XV5 Gna12-201ENSMUST00000000153 3416 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Chd8Q09XV5 AL645783.1-201ENSMUST00000221416 1832 ntBASIC13.61□□□□□ -0.23
Chd8Q09XV5 St3gal3-203ENSMUST00000106410 2225 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Chd8Q09XV5 Orai3-201ENSMUST00000061587 1996 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Chd8Q09XV5 Ppp2r5e-201ENSMUST00000021447 4810 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Chd8Q09XV5 Drap1-210ENSMUST00000148219 727 ntTSL 3 BASIC13.61□□□□□ -0.23
Chd8Q09XV5 A930015D03Rik-201ENSMUST00000173900 1111 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
Chd8Q09XV5 Gm9445-201ENSMUST00000207454 1285 ntBASIC13.61□□□□□ -0.23
Chd8Q09XV5 4930438A08Rik-202ENSMUST00000208022 918 ntTSL 5 BASIC13.61□□□□□ -0.23
Chd8Q09XV5 CT573034.1-201ENSMUST00000222983 313 ntBASIC13.61□□□□□ -0.23
Chd8Q09XV5 Gm9823-201ENSMUST00000051212 327 ntBASIC13.61□□□□□ -0.23
Chd8Q09XV5 Tmod4-201ENSMUST00000005769 1242 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Chd8Q09XV5 Mir433-201ENSMUST00000093564 124 ntBASIC13.61□□□□□ -0.23
Chd8Q09XV5 Ctbp2-201ENSMUST00000033269 2321 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Chd8Q09XV5 Nkiras2-201ENSMUST00000017981 2097 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Chd8Q09XV5 Tbx20-202ENSMUST00000166018 1801 ntAPPRIS ALT2 TSL 1 (best) BASIC13.61□□□□□ -0.23
Chd8Q09XV5 Nespas-203ENSMUST00000151472 2248 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
Chd8Q09XV5 Abhd16b-201ENSMUST00000069649 1775 ntAPPRIS P1 BASIC13.6□□□□□ -0.23
Chd8Q09XV5 Cidec-201ENSMUST00000032416 1703 ntAPPRIS P2 TSL 1 (best) BASIC13.6□□□□□ -0.23
Chd8Q09XV5 Gm42743-201ENSMUST00000051089 1511 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
Chd8Q09XV5 Serf1-203ENSMUST00000132053 516 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
Chd8Q09XV5 Snhg8-201ENSMUST00000196466 448 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
Chd8Q09XV5 Gm7118-201ENSMUST00000200167 1003 ntBASIC13.6□□□□□ -0.23
Chd8Q09XV5 Gm7446-201ENSMUST00000221035 1240 ntBASIC13.6□□□□□ -0.23
Chd8Q09XV5 Tex30-201ENSMUST00000027215 1272 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Chd8Q09XV5 Cryba2-201ENSMUST00000006721 720 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Chd8Q09XV5 Zfp446-204ENSMUST00000108537 2178 ntAPPRIS ALT2 TSL 1 (best) BASIC13.6□□□□□ -0.23
Chd8Q09XV5 Slc6a8-204ENSMUST00000114467 2509 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Chd8Q09XV5 Sgta-202ENSMUST00000218208 1964 ntAPPRIS ALT1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Chd8Q09XV5 Hikeshi-206ENSMUST00000153470 2224 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Chd8Q09XV5 Fam105a-203ENSMUST00000226170 3043 ntBASIC13.6□□□□□ -0.23
Chd8Q09XV5 Cd82-205ENSMUST00000116457 1683 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Chd8Q09XV5 Ddx39-201ENSMUST00000019576 1656 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Chd8Q09XV5 Tbc1d8-201ENSMUST00000054462 4451 ntAPPRIS P2 TSL 1 (best) BASIC13.6□□□□□ -0.23
Chd8Q09XV5 Zscan30-202ENSMUST00000224144 1458 ntBASIC13.6□□□□□ -0.23
Chd8Q09XV5 Aqp8-201ENSMUST00000033023 1487 ntAPPRIS ALT2 TSL 1 (best) BASIC13.6□□□□□ -0.23
Chd8Q09XV5 Fis1-203ENSMUST00000111097 601 ntTSL 2 BASIC13.6□□□□□ -0.23
Chd8Q09XV5 Prcd-202ENSMUST00000116318 799 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Chd8Q09XV5 Fis1-201ENSMUST00000019198 786 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Chd8Q09XV5 Il31-201ENSMUST00000031389 806 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Chd8Q09XV5 B230118H07Rik-202ENSMUST00000099682 895 ntAPPRIS ALT2 TSL 5 BASIC13.6□□□□□ -0.23
Chd8Q09XV5 Ulk1-201ENSMUST00000031490 5213 ntAPPRIS P3 TSL 1 (best) BASIC13.6□□□□□ -0.23
Chd8Q09XV5 Otud5-201ENSMUST00000033494 4259 ntAPPRIS P3 TSL 1 (best) BASIC13.6□□□□□ -0.23
Chd8Q09XV5 Rac1-202ENSMUST00000100489 2325 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
Chd8Q09XV5 Pdlim7-201ENSMUST00000046246 1697 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Chd8Q09XV5 Enah-210ENSMUST00000193074 1971 ntAPPRIS ALT2 TSL 5 BASIC13.59□□□□□ -0.23
Chd8Q09XV5 Gm26580-201ENSMUST00000181002 2095 ntTSL 5 BASIC13.59□□□□□ -0.23
Chd8Q09XV5 Dyx1c1-202ENSMUST00000098567 1612 ntAPPRIS ALT2 TSL 5 BASIC13.59□□□□□ -0.23
Chd8Q09XV5 Prdm6-201ENSMUST00000091900 2601 ntAPPRIS P2 TSL 1 (best) BASIC13.59□□□□□ -0.23
Chd8Q09XV5 Chpt1-203ENSMUST00000117440 4863 ntAPPRIS ALT2 TSL 5 BASIC13.59□□□□□ -0.23
Chd8Q09XV5 Gm9816-201ENSMUST00000122292 1414 ntBASIC13.59□□□□□ -0.23
Chd8Q09XV5 Cd27-202ENSMUST00000112281 832 ntTSL 3 BASIC13.59□□□□□ -0.23
Chd8Q09XV5 Gm15444-201ENSMUST00000148335 388 ntTSL 5 BASIC13.59□□□□□ -0.23
Chd8Q09XV5 Tmem40-205ENSMUST00000166254 811 ntAPPRIS P3 TSL 5 BASIC13.59□□□□□ -0.23
Retrieved 100 of 76,532 protein–RNA pairs in 27.3 ms