Protein–RNA interactions for Protein: P97801

Smn1, Survival motor neuron protein, mousemouse

Predictions only

Length 288 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smn1P97801 Gde1-201ENSMUST00000038791 1582 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Smn1P97801 Ccna2-201ENSMUST00000029270 2965 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Smn1P97801 Cd5l-201ENSMUST00000015998 2036 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Smn1P97801 Mospd2-201ENSMUST00000004715 2015 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Smn1P97801 Ints10-203ENSMUST00000110241 2322 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Smn1P97801 Grn-201ENSMUST00000049460 2340 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Smn1P97801 Hnrnpm-201ENSMUST00000087582 2339 ntAPPRIS ALT2 TSL 1 (best) BASIC13.18□□□□□ -0.3
Smn1P97801 Mocs1-201ENSMUST00000024797 2646 ntTSL 5 BASIC13.18□□□□□ -0.3
Smn1P97801 Map6-204ENSMUST00000127492 4920 ntAPPRIS ALT2 TSL 1 (best) BASIC13.18□□□□□ -0.3
Smn1P97801 Myrf-201ENSMUST00000088013 5674 ntAPPRIS ALT2 TSL 5 BASIC13.18□□□□□ -0.3
Smn1P97801 Ncmap-204ENSMUST00000105859 1801 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Smn1P97801 Hars-201ENSMUST00000001416 1987 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Smn1P97801 Tor1aip1-201ENSMUST00000027738 1952 ntAPPRIS P3 TSL 1 (best) BASIC13.18□□□□□ -0.3
Smn1P97801 Gm17108-201ENSMUST00000168625 2877 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Smn1P97801 Hnf4a-202ENSMUST00000109411 4362 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Smn1P97801 Rgs3-201ENSMUST00000065870 4698 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Smn1P97801 Smoc2-201ENSMUST00000024660 2832 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Smn1P97801 Ttc16-202ENSMUST00000091059 2388 ntAPPRIS ALT2 TSL 1 (best) BASIC13.17□□□□□ -0.3
Smn1P97801 Rtn4-201ENSMUST00000060992 1773 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Smn1P97801 Tjp2-201ENSMUST00000099558 4591 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Smn1P97801 Raf1-201ENSMUST00000000451 3070 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Smn1P97801 Tgfa-201ENSMUST00000032066 4527 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Smn1P97801 Dnajc7-201ENSMUST00000014339 2330 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Smn1P97801 Tpbg-202ENSMUST00000098500 3481 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Smn1P97801 Pak1ip1-201ENSMUST00000046951 1722 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Smn1P97801 Midn-202ENSMUST00000099492 3597 ntAPPRIS ALT2 TSL 5 BASIC13.17□□□□□ -0.3
Smn1P97801 Ppil1-201ENSMUST00000024802 1434 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Smn1P97801 Synrg-201ENSMUST00000049714 3995 ntAPPRIS ALT2 TSL 5 BASIC13.17□□□□□ -0.3
Smn1P97801 Hist1h4k-201ENSMUST00000102983 312 ntAPPRIS P1 BASIC13.17□□□□□ -0.3
Smn1P97801 Cldn18-203ENSMUST00000131922 860 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Smn1P97801 Gm20422-202ENSMUST00000149782 956 ntTSL 2 BASIC13.17□□□□□ -0.3
Smn1P97801 Ctsg-201ENSMUST00000015583 1002 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Smn1P97801 Has3-202ENSMUST00000175987 1154 ntTSL 5 BASIC13.17□□□□□ -0.3
Smn1P97801 Gm26643-201ENSMUST00000180854 1274 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Smn1P97801 Coq7-201ENSMUST00000032887 914 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Smn1P97801 Epha2-201ENSMUST00000006614 3913 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Smn1P97801 Fam178b-201ENSMUST00000114981 1659 ntAPPRIS P3 TSL 1 (best) BASIC13.17□□□□□ -0.3
Smn1P97801 Col8a2-201ENSMUST00000070132 4332 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Smn1P97801 Pnck-202ENSMUST00000114472 1532 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Smn1P97801 Hacd4-201ENSMUST00000030221 2089 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Smn1P97801 Zfp36-202ENSMUST00000209061 2465 ntAPPRIS ALT2 BASIC13.17□□□□□ -0.3
Smn1P97801 Sf3b4-201ENSMUST00000076372 1915 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Smn1P97801 Dnmt3b-201ENSMUST00000056495 4318 ntAPPRIS ALT2 TSL 5 BASIC13.17□□□□□ -0.3
Smn1P97801 Pcbp3-201ENSMUST00000001148 2013 ntAPPRIS P3 TSL 1 (best) BASIC13.17□□□□□ -0.3
Smn1P97801 Rbm26-201ENSMUST00000022715 3633 ntTSL 5 BASIC13.17□□□□□ -0.3
Smn1P97801 Gm38042-201ENSMUST00000191614 5208 ntBASIC13.16□□□□□ -0.3
Smn1P97801 Ppef2-201ENSMUST00000031359 2274 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Smn1P97801 Nsun7-203ENSMUST00000201100 2775 ntAPPRIS P3 TSL 5 BASIC13.16□□□□□ -0.3
Smn1P97801 Mcmbp-201ENSMUST00000057557 4237 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Smn1P97801 Gm4353-201ENSMUST00000111755 1559 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Smn1P97801 Nup35-201ENSMUST00000028382 1559 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Smn1P97801 Cds1-201ENSMUST00000031273 3924 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Smn1P97801 Mob4-202ENSMUST00000159311 1816 ntTSL 3 BASIC13.16□□□□□ -0.3
Smn1P97801 Pdpk1-201ENSMUST00000052462 1832 ntAPPRIS ALT2 TSL 1 (best) BASIC13.16□□□□□ -0.3
Smn1P97801 Sapcd2-201ENSMUST00000028329 3121 ntAPPRIS P3 TSL 1 (best) BASIC13.16□□□□□ -0.3
Smn1P97801 Dnajc6-202ENSMUST00000094953 5322 ntAPPRIS P3 TSL 1 (best) BASIC13.16□□□□□ -0.3
Smn1P97801 Spag1-202ENSMUST00000171205 3219 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Smn1P97801 Galnt2-201ENSMUST00000034458 4113 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Smn1P97801 Disc1-208ENSMUST00000122389 1694 ntAPPRIS ALT2 TSL 1 (best) BASIC13.16□□□□□ -0.3
Smn1P97801 Tnnt2-212ENSMUST00000189732 1123 ntAPPRIS ALT2 TSL 5 BASIC13.16□□□□□ -0.3
Smn1P97801 Limd2-202ENSMUST00000064545 798 ntAPPRIS P1 TSL 2 BASIC13.16□□□□□ -0.3
Smn1P97801 Cops9-201ENSMUST00000097642 438 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Smn1P97801 C530025M09Rik-201ENSMUST00000099264 690 ntAPPRIS P1 BASIC13.16□□□□□ -0.3
Smn1P97801 Zfp90-203ENSMUST00000212606 2685 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Smn1P97801 Rbm42-202ENSMUST00000108141 1526 ntAPPRIS ALT2 TSL 5 BASIC13.16□□□□□ -0.3
Smn1P97801 Alx1-204ENSMUST00000217946 1542 ntTSL 5 BASIC13.16□□□□□ -0.3
Smn1P97801 Psen2-204ENSMUST00000111106 2020 ntAPPRIS P2 TSL 5 BASIC13.16□□□□□ -0.3
Smn1P97801 Cd151-202ENSMUST00000106000 1865 ntAPPRIS P1 TSL 5 BASIC13.16□□□□□ -0.3
Smn1P97801 Gm11960-202ENSMUST00000181063 2858 ntBASIC13.16□□□□□ -0.3
Smn1P97801 9130024F11Rik-202ENSMUST00000185204 2628 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Smn1P97801 Map7d1-203ENSMUST00000122129 3249 ntAPPRIS ALT2 TSL 5 BASIC13.16□□□□□ -0.3
Smn1P97801 Galnt14-201ENSMUST00000024858 2990 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Smn1P97801 Gtf2h5-201ENSMUST00000039487 2245 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Smn1P97801 Wwc2-201ENSMUST00000057561 8678 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Smn1P97801 Ppp2r1a-201ENSMUST00000007708 2410 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Smn1P97801 Ren1-201ENSMUST00000094556 1592 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Smn1P97801 Sfta3-ps-205ENSMUST00000220379 2187 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
Smn1P97801 Rad51-201ENSMUST00000028795 3368 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Smn1P97801 Syt17-204ENSMUST00000203796 2957 ntAPPRIS ALT2 TSL 1 (best) BASIC13.15□□□□□ -0.3
Smn1P97801 Gm8668-201ENSMUST00000120559 1447 ntBASIC13.15□□□□□ -0.3
Smn1P97801 Tbx3os1-206ENSMUST00000202307 1787 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
Smn1P97801 Itgav-201ENSMUST00000028499 7054 ntAPPRIS P2 TSL 1 (best) BASIC13.15□□□□□ -0.3
Smn1P97801 Sybu-203ENSMUST00000110269 2920 ntAPPRIS ALT2 TSL 1 (best) BASIC13.15□□□□□ -0.3
Smn1P97801 Pou2f2-201ENSMUST00000098679 2340 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
Smn1P97801 2210408F21Rik-213ENSMUST00000153057 652 ntTSL 3 BASIC13.15□□□□□ -0.3
Smn1P97801 Calu-208ENSMUST00000173694 611 ntTSL 5 BASIC13.15□□□□□ -0.3
Smn1P97801 Spata25-201ENSMUST00000017911 786 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Smn1P97801 Gm7507-201ENSMUST00000183053 1008 ntBASIC13.15□□□□□ -0.3
Smn1P97801 Gm37280-201ENSMUST00000194583 375 ntTSL 3 BASIC13.15□□□□□ -0.3
Smn1P97801 Gm10358-201ENSMUST00000212864 1250 ntAPPRIS P1 BASIC13.15□□□□□ -0.3
Smn1P97801 Fam213b-201ENSMUST00000030935 883 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Smn1P97801 Cct7-201ENSMUST00000032078 2441 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Smn1P97801 Iqcb1-201ENSMUST00000023535 2257 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Smn1P97801 Kcna1-202ENSMUST00000203094 3150 ntAPPRIS P1 BASIC13.15□□□□□ -0.3
Smn1P97801 Gm5357-201ENSMUST00000212720 1924 ntBASIC13.15□□□□□ -0.3
Smn1P97801 Otud6b-201ENSMUST00000117268 3266 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Smn1P97801 Lman2l-204ENSMUST00000125304 3378 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Smn1P97801 Luc7l3-201ENSMUST00000021226 3373 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
Smn1P97801 Ntng2-210ENSMUST00000177689 1679 ntAPPRIS ALT2 TSL 5 BASIC13.15□□□□□ -0.31
Smn1P97801 Tyk2-205ENSMUST00000214864 1662 ntTSL 1 (best) BASIC13.15□□□□□ -0.31
Retrieved 100 of 76,532 protein–RNA pairs in 51 ms