Protein–RNA interactions for Protein: P79621

Ciita, MHC class II transactivator, mousemouse

Predictions only

Length 1,155 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CiitaP79621 Zfp281-201ENSMUST00000047734 4933 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
CiitaP79621 Pnkp-203ENSMUST00000107876 1770 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
CiitaP79621 Fam110a-201ENSMUST00000062047 1754 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
CiitaP79621 Zfx-204ENSMUST00000113927 6933 ntAPPRIS P1 TSL 5 BASIC16.61■□□□□ 0.25
CiitaP79621 Dmpk-202ENSMUST00000108473 2588 ntAPPRIS ALT2 TSL 1 (best) BASIC16.61■□□□□ 0.25
CiitaP79621 Elavl3-203ENSMUST00000215901 3037 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
CiitaP79621 Gm26889-201ENSMUST00000181523 2252 ntTSL 5 BASIC16.61■□□□□ 0.25
CiitaP79621 Terf1-203ENSMUST00000188371 2268 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
CiitaP79621 Pqlc1-205ENSMUST00000131780 2080 ntAPPRIS P3 TSL 1 (best) BASIC16.6■□□□□ 0.25
CiitaP79621 Gm8237-201ENSMUST00000164484 2051 ntAPPRIS P5 TSL 5 BASIC16.6■□□□□ 0.25
CiitaP79621 Aim2-204ENSMUST00000166137 2079 ntAPPRIS P1 TSL 5 BASIC16.6■□□□□ 0.25
CiitaP79621 Taf15-201ENSMUST00000021018 2068 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
CiitaP79621 Shcbp1l-201ENSMUST00000042373 2092 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
CiitaP79621 Hnrnpa2b1-201ENSMUST00000069949 1647 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
CiitaP79621 Cd82-202ENSMUST00000099696 1657 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
CiitaP79621 Flt1-203ENSMUST00000110529 6292 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
CiitaP79621 Rasgrp2-205ENSMUST00000113471 535 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
CiitaP79621 Mpc1-205ENSMUST00000142594 961 ntTSL 5 BASIC16.6■□□□□ 0.25
CiitaP79621 Gm27301-201ENSMUST00000184012 127 ntBASIC16.6■□□□□ 0.25
CiitaP79621 Ybx1-ps2-201ENSMUST00000201305 957 ntBASIC16.6■□□□□ 0.25
CiitaP79621 CT009510.1-201ENSMUST00000227972 270 ntBASIC16.6■□□□□ 0.25
CiitaP79621 Spr-201ENSMUST00000045986 1230 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
CiitaP79621 Nr1i3-203ENSMUST00000111328 1359 ntAPPRIS ALT2 TSL 1 (best) BASIC16.6■□□□□ 0.25
CiitaP79621 Fam103a1-202ENSMUST00000118190 1391 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
CiitaP79621 Il6st-206ENSMUST00000183886 3004 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
CiitaP79621 Susd3-202ENSMUST00000058196 1418 ntAPPRIS P3 TSL 1 (best) BASIC16.6■□□□□ 0.25
CiitaP79621 Ccdc166-201ENSMUST00000182172 2584 ntBASIC16.6■□□□□ 0.25
CiitaP79621 Stk11-202ENSMUST00000105370 1474 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
CiitaP79621 Cyp2ab1-201ENSMUST00000023513 2720 ntTSL 5 BASIC16.6■□□□□ 0.25
CiitaP79621 I0C0044D17Rik-201ENSMUST00000097964 2264 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
CiitaP79621 Gm5096-201ENSMUST00000091776 1858 ntAPPRIS P1 BASIC16.59■□□□□ 0.25
CiitaP79621 2610027K06Rik-203ENSMUST00000140673 2076 ntTSL 5 BASIC16.59■□□□□ 0.25
CiitaP79621 Hoxb1-201ENSMUST00000019117 2086 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
CiitaP79621 Gm15427-201ENSMUST00000117288 531 ntBASIC16.59■□□□□ 0.25
CiitaP79621 Rpl18-ps1-201ENSMUST00000121555 525 ntBASIC16.59■□□□□ 0.25
CiitaP79621 Gm16151-201ENSMUST00000129696 639 ntTSL 3 BASIC16.59■□□□□ 0.25
CiitaP79621 Gm20481-201ENSMUST00000173680 564 ntAPPRIS P1 TSL 3 BASIC16.59■□□□□ 0.25
CiitaP79621 Gm2272-201ENSMUST00000194903 582 ntBASIC16.59■□□□□ 0.25
CiitaP79621 Abhd18-207ENSMUST00000203892 1021 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
CiitaP79621 Calcb-201ENSMUST00000032902 962 ntAPPRIS P2 TSL 1 (best) BASIC16.59■□□□□ 0.25
CiitaP79621 Cdk2-201ENSMUST00000026415 2240 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
CiitaP79621 Ankrd13b-201ENSMUST00000037593 3105 ntAPPRIS ALT2 TSL 1 (best) BASIC16.59■□□□□ 0.25
CiitaP79621 AC093043.3-201ENSMUST00000226531 2273 ntBASIC16.59■□□□□ 0.25
CiitaP79621 Tbc1d19-201ENSMUST00000037337 2273 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
CiitaP79621 Pqbp1-202ENSMUST00000115654 1374 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
CiitaP79621 BC037032-204ENSMUST00000155191 3291 ntTSL 5 BASIC16.59■□□□□ 0.25
CiitaP79621 Ndufab1-203ENSMUST00000123296 1416 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
CiitaP79621 Efr3a-201ENSMUST00000015146 5215 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
CiitaP79621 Lrrc56-203ENSMUST00000084446 2390 ntAPPRIS ALT2 TSL 1 (best) BASIC16.59■□□□□ 0.25
CiitaP79621 Gm5648-201ENSMUST00000122244 1587 ntBASIC16.59■□□□□ 0.25
CiitaP79621 Cep152-201ENSMUST00000089776 5768 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
CiitaP79621 Axin1-202ENSMUST00000118904 2833 ntAPPRIS ALT2 TSL 1 (best) BASIC16.59■□□□□ 0.25
CiitaP79621 Irgc1-201ENSMUST00000080594 1737 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
CiitaP79621 Gabrb3-201ENSMUST00000039697 5579 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
CiitaP79621 Dnah9-202ENSMUST00000108691 2671 ntTSL 1 (best) BASIC16.58■□□□□ 0.25
CiitaP79621 Snph-203ENSMUST00000109875 4910 ntAPPRIS P3 TSL 1 (best) BASIC16.58■□□□□ 0.24
CiitaP79621 Nipa2-201ENSMUST00000032635 3197 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
CiitaP79621 Gm16198-201ENSMUST00000118766 670 ntBASIC16.58■□□□□ 0.24
CiitaP79621 Tpm3-205ENSMUST00000121503 1139 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
CiitaP79621 Gm17271-201ENSMUST00000165535 355 ntBASIC16.58■□□□□ 0.24
CiitaP79621 Fam71e1-204ENSMUST00000205422 366 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
CiitaP79621 Gm45612-201ENSMUST00000211320 160 ntBASIC16.58■□□□□ 0.24
CiitaP79621 Gm19684-201ENSMUST00000173128 1611 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
CiitaP79621 Pitx2-203ENSMUST00000106382 1757 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
CiitaP79621 Letm2-208ENSMUST00000210616 2974 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
CiitaP79621 Pacsin2-203ENSMUST00000171436 3693 ntAPPRIS P1 TSL 5 BASIC16.58■□□□□ 0.24
CiitaP79621 Arid4b-204ENSMUST00000110536 5783 ntTSL 5 BASIC16.57■□□□□ 0.24
CiitaP79621 Sept8-201ENSMUST00000108987 4436 ntAPPRIS ALT2 TSL 1 (best) BASIC16.57■□□□□ 0.24
CiitaP79621 Sprn-201ENSMUST00000059241 3374 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
CiitaP79621 Ext2-201ENSMUST00000028623 2871 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
CiitaP79621 Cdyl2-201ENSMUST00000109102 2411 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
CiitaP79621 Cmtm1-202ENSMUST00000160596 1900 ntAPPRIS ALT2 TSL 5 BASIC16.57■□□□□ 0.24
CiitaP79621 Bard1-201ENSMUST00000027393 5659 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
CiitaP79621 Rasgrp1-207ENSMUST00000178884 5104 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
CiitaP79621 Mdga1-208ENSMUST00000171691 8339 ntAPPRIS ALT2 TSL 5 BASIC16.57■□□□□ 0.24
CiitaP79621 Acaa2-201ENSMUST00000041053 1515 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
CiitaP79621 Gm34419-201ENSMUST00000211383 1387 ntTSL 5 BASIC16.57■□□□□ 0.24
CiitaP79621 Dio1-202ENSMUST00000106748 396 ntTSL 5 BASIC16.57■□□□□ 0.24
CiitaP79621 Prss45-202ENSMUST00000146794 1208 ntAPPRIS ALT2 TSL 1 (best) BASIC16.57■□□□□ 0.24
CiitaP79621 Znrf1-213ENSMUST00000174333 515 ntTSL 3 BASIC16.57■□□□□ 0.24
CiitaP79621 Hddc3-206ENSMUST00000206074 565 ntTSL 2 BASIC16.57■□□□□ 0.24
CiitaP79621 Gm44662-201ENSMUST00000206970 412 ntTSL 5 BASIC16.57■□□□□ 0.24
CiitaP79621 Gm45208-202ENSMUST00000208156 1153 ntAPPRIS P1 TSL 5 BASIC16.57■□□□□ 0.24
CiitaP79621 Gm45231-201ENSMUST00000208629 1064 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
CiitaP79621 Kif21a-204ENSMUST00000109287 6124 ntAPPRIS ALT2 TSL 1 (best) BASIC16.57■□□□□ 0.24
CiitaP79621 Kif21a-205ENSMUST00000109288 6142 ntAPPRIS P3 TSL 1 (best) BASIC16.57■□□□□ 0.24
CiitaP79621 Rb1-201ENSMUST00000022701 4656 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
CiitaP79621 Lbp-201ENSMUST00000016168 2525 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
CiitaP79621 Aste1-202ENSMUST00000123807 2349 ntAPPRIS ALT2 TSL 2 BASIC16.57■□□□□ 0.24
CiitaP79621 Trpv4-203ENSMUST00000112219 2295 ntTSL 5 BASIC16.57■□□□□ 0.24
CiitaP79621 Iqcb1-201ENSMUST00000023535 2257 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
CiitaP79621 Zc3h14-204ENSMUST00000110105 3514 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
CiitaP79621 Golga5-201ENSMUST00000021609 3390 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
CiitaP79621 Gna15-201ENSMUST00000043709 1962 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
CiitaP79621 Slc9a3r1-201ENSMUST00000021077 1925 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
CiitaP79621 Sphk1-204ENSMUST00000106386 1879 ntAPPRIS ALT2 TSL 1 (best) BASIC16.56■□□□□ 0.24
CiitaP79621 Dcaf13-201ENSMUST00000022909 1551 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
CiitaP79621 Lsp1-203ENSMUST00000105966 1503 ntAPPRIS ALT2 TSL 1 (best) BASIC16.56■□□□□ 0.24
CiitaP79621 Zkscan3-208ENSMUST00000224820 5398 ntBASIC16.56■□□□□ 0.24
CiitaP79621 1810041L15Rik-203ENSMUST00000189248 5296 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
Retrieved 100 of 76,532 protein–RNA pairs in 61.9 ms