Protein–RNA interactions for Protein: P70662

Ldb1, LIM domain-binding protein 1, mousemouse

Predictions only

Length 411 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ldb1P70662 Gm43352-201ENSMUST00000196419 3065 ntBASIC15.31■□□□□ 0.04
Ldb1P70662 Cacna2d2-202ENSMUST00000085092 5183 ntAPPRIS P4 TSL 5 BASIC15.31■□□□□ 0.04
Ldb1P70662 Gm16194-203ENSMUST00000141239 362 ntTSL 3 BASIC15.31■□□□□ 0.04
Ldb1P70662 Edf1-201ENSMUST00000015236 722 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Ldb1P70662 Rps13-ps1-201ENSMUST00000183478 538 ntBASIC15.31■□□□□ 0.04
Ldb1P70662 Gtf3c2-202ENSMUST00000200871 318 ntTSL 3 BASIC15.31■□□□□ 0.04
Ldb1P70662 Umpk-ps-201ENSMUST00000211897 827 ntBASIC15.31■□□□□ 0.04
Ldb1P70662 AC110091.2-202ENSMUST00000216718 1148 ntTSL 5 BASIC15.31■□□□□ 0.04
Ldb1P70662 Mgst3-201ENSMUST00000028005 1097 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Ldb1P70662 Magohb-201ENSMUST00000032307 767 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Ldb1P70662 Nxnl1-202ENSMUST00000163659 2730 ntAPPRIS P1 TSL 2 BASIC15.31■□□□□ 0.04
Ldb1P70662 Smoc2-201ENSMUST00000024660 2832 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Ldb1P70662 Gstz1-205ENSMUST00000222885 1571 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
Ldb1P70662 Acaa1b-201ENSMUST00000010795 1689 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Ldb1P70662 R3hcc1-201ENSMUST00000118374 1726 ntAPPRIS ALT2 TSL 1 (best) BASIC15.31■□□□□ 0.04
Ldb1P70662 Spon1-202ENSMUST00000084696 5201 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
Ldb1P70662 Dmkn-202ENSMUST00000054427 2034 ntAPPRIS ALT2 TSL 5 BASIC15.31■□□□□ 0.04
Ldb1P70662 Sptlc2-201ENSMUST00000021424 6710 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Ldb1P70662 Gnat1-201ENSMUST00000010205 2328 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Ldb1P70662 Zfp277-202ENSMUST00000069692 2438 ntAPPRIS ALT2 TSL 1 (best) BASIC15.31■□□□□ 0.04
Ldb1P70662 Repin1-207ENSMUST00000163452 2959 ntAPPRIS P3 TSL 1 (best) BASIC15.3■□□□□ 0.04
Ldb1P70662 Wnk2-207ENSMUST00000159559 6584 ntAPPRIS ALT2 TSL 5 BASIC15.3■□□□□ 0.04
Ldb1P70662 Gpam-201ENSMUST00000061856 3832 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Ldb1P70662 Cadps2-206ENSMUST00000115361 4571 ntAPPRIS ALT2 TSL 1 (best) BASIC15.3■□□□□ 0.04
Ldb1P70662 9430038I01Rik-202ENSMUST00000117404 699 ntAPPRIS ALT2 TSL 5 BASIC15.3■□□□□ 0.04
Ldb1P70662 Fgf20-202ENSMUST00000118639 587 ntTSL 3 BASIC15.3■□□□□ 0.04
Ldb1P70662 Kctd20-208ENSMUST00000168507 2400 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Ldb1P70662 Pitx2-206ENSMUST00000174623 1493 ntTSL 2 BASIC15.3■□□□□ 0.04
Ldb1P70662 Gyg-203ENSMUST00000178328 1698 ntAPPRIS P2 TSL 1 (best) BASIC15.3■□□□□ 0.04
Ldb1P70662 4930445N18Rik-202ENSMUST00000181345 1033 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
Ldb1P70662 Gm4535-201ENSMUST00000182274 558 ntBASIC15.3■□□□□ 0.04
Ldb1P70662 Gm7286-201ENSMUST00000182691 1007 ntBASIC15.3■□□□□ 0.04
Ldb1P70662 Pigb-207ENSMUST00000184389 2079 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Ldb1P70662 Fbxo5-201ENSMUST00000019907 1940 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Ldb1P70662 Lrrc7-204ENSMUST00000199890 6326 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
Ldb1P70662 Fosb-206ENSMUST00000208446 1090 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
Ldb1P70662 Gm31774-201ENSMUST00000212910 1366 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
Ldb1P70662 6030419C18Rik-202ENSMUST00000216294 1601 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Ldb1P70662 Prelid1-201ENSMUST00000021942 2644 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Ldb1P70662 Csrp2-207ENSMUST00000220409 780 ntTSL 2 BASIC15.3■□□□□ 0.04
Ldb1P70662 Gm6296-201ENSMUST00000222599 943 ntBASIC15.3■□□□□ 0.04
Ldb1P70662 AC159106.1-201ENSMUST00000224421 690 ntBASIC15.3■□□□□ 0.04
Ldb1P70662 Rangrf-201ENSMUST00000038644 820 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Ldb1P70662 Prdx6-201ENSMUST00000051925 959 ntTSL 2 BASIC15.3■□□□□ 0.04
Ldb1P70662 Chmp2a-201ENSMUST00000005711 949 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Ldb1P70662 Snupn-201ENSMUST00000068856 1391 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Ldb1P70662 Gm10355-201ENSMUST00000097146 517 ntBASIC15.3■□□□□ 0.04
Ldb1P70662 Eda-206ENSMUST00000113779 4955 ntAPPRIS P3 TSL 1 (best) BASIC15.3■□□□□ 0.04
Ldb1P70662 Zfp36l2-201ENSMUST00000060366 3530 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Ldb1P70662 Adarb1-202ENSMUST00000098374 6584 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
Ldb1P70662 P2ry2-206ENSMUST00000208340 2693 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Ldb1P70662 Adnp-201ENSMUST00000057793 4917 ntAPPRIS P1 TSL 5 BASIC15.29■□□□□ 0.04
Ldb1P70662 Zfp358-203ENSMUST00000208423 2200 ntAPPRIS P1 BASIC15.29■□□□□ 0.04
Ldb1P70662 Ptpa-203ENSMUST00000113603 2169 ntTSL 5 BASIC15.29■□□□□ 0.04
Ldb1P70662 Gss-201ENSMUST00000079691 1963 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Ldb1P70662 Galt-202ENSMUST00000108038 1859 ntAPPRIS ALT2 TSL 2 BASIC15.29■□□□□ 0.04
Ldb1P70662 2610206C17Rik-201ENSMUST00000129059 1717 ntTSL 2 BASIC15.29■□□□□ 0.04
Ldb1P70662 Slc30a5-201ENSMUST00000067246 3179 ntAPPRIS P2 TSL 1 (best) BASIC15.29■□□□□ 0.04
Ldb1P70662 Cry1-201ENSMUST00000020227 3026 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Ldb1P70662 Mmp14-201ENSMUST00000089688 2596 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Ldb1P70662 Kctd10-201ENSMUST00000001125 1026 ntAPPRIS ALT1 TSL 5 BASIC15.29■□□□□ 0.04
Ldb1P70662 Gm26646-202ENSMUST00000205705 439 ntTSL 5 BASIC15.29■□□□□ 0.04
Ldb1P70662 AC158538.2-201ENSMUST00000225455 906 ntBASIC15.29■□□□□ 0.04
Ldb1P70662 Mkrn3-201ENSMUST00000094340 2547 ntAPPRIS P1 BASIC15.29■□□□□ 0.04
Ldb1P70662 Gm26666-201ENSMUST00000180763 2461 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
Ldb1P70662 Rhpn1-202ENSMUST00000121137 2283 ntAPPRIS ALT2 TSL 1 (best) BASIC15.29■□□□□ 0.04
Ldb1P70662 Iqcb1-201ENSMUST00000023535 2257 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Ldb1P70662 Ralb-201ENSMUST00000004565 2289 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Ldb1P70662 Syt6-201ENSMUST00000090697 4416 ntAPPRIS P1 TSL 5 BASIC15.29■□□□□ 0.04
Ldb1P70662 Nipal2-201ENSMUST00000040791 4331 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Ldb1P70662 Zpbp-201ENSMUST00000020413 4248 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Ldb1P70662 Sybu-202ENSMUST00000110267 3127 ntAPPRIS ALT2 TSL 1 (best) BASIC15.29■□□□□ 0.04
Ldb1P70662 Sec24a-203ENSMUST00000109092 2094 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
Ldb1P70662 Cuedc2-202ENSMUST00000167861 1941 ntAPPRIS P1 TSL 5 BASIC15.29■□□□□ 0.04
Ldb1P70662 Cyp2ab1-201ENSMUST00000023513 2720 ntTSL 5 BASIC15.29■□□□□ 0.04
Ldb1P70662 Slc33a1-203ENSMUST00000161659 2554 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Ldb1P70662 Cep57-201ENSMUST00000034398 2523 ntAPPRIS P3 TSL 1 (best) BASIC15.28■□□□□ 0.04
Ldb1P70662 Ndufv1-201ENSMUST00000042497 1661 ntAPPRIS P2 TSL 1 (best) BASIC15.28■□□□□ 0.04
Ldb1P70662 Snai1-201ENSMUST00000052631 1621 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Ldb1P70662 Gipc2-201ENSMUST00000046614 1596 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Ldb1P70662 Krt23-201ENSMUST00000006969 1565 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Ldb1P70662 Cask-203ENSMUST00000115436 8260 ntAPPRIS P1 TSL 2 BASIC15.28■□□□□ 0.04
Ldb1P70662 Cgn-203ENSMUST00000153263 2210 ntTSL 2 BASIC15.28■□□□□ 0.04
Ldb1P70662 Ipo8-201ENSMUST00000048418 5360 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Ldb1P70662 Lcat-201ENSMUST00000038896 1342 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Ldb1P70662 Nelfa-201ENSMUST00000030993 2580 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Ldb1P70662 Acvrl1-204ENSMUST00000120028 1932 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Ldb1P70662 Trmt112-ps2-201ENSMUST00000117987 378 ntBASIC15.28■□□□□ 0.04
Ldb1P70662 Gm15358-201ENSMUST00000119249 520 ntBASIC15.28■□□□□ 0.04
Ldb1P70662 Tcp1-207ENSMUST00000143961 614 ntTSL 2 BASIC15.28■□□□□ 0.04
Ldb1P70662 Ndufb10-201ENSMUST00000045602 732 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Ldb1P70662 Ifi27-204ENSMUST00000079294 963 ntAPPRIS ALT2 TSL 1 (best) BASIC15.28■□□□□ 0.04
Ldb1P70662 Srsf11-204ENSMUST00000121326 3106 ntAPPRIS P4 TSL 5 BASIC15.28■□□□□ 0.04
Ldb1P70662 Gfm2-211ENSMUST00000161913 1829 ntTSL 2 BASIC15.28■□□□□ 0.04
Ldb1P70662 E530011L22Rik-201ENSMUST00000181325 5282 ntBASIC15.28■□□□□ 0.04
Ldb1P70662 Rimkla-201ENSMUST00000049994 4097 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Ldb1P70662 Hdhd2-203ENSMUST00000097522 2318 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Ldb1P70662 Arhgef1-201ENSMUST00000047873 3212 ntAPPRIS ALT2 TSL 1 (best) BASIC15.28■□□□□ 0.04
Ldb1P70662 Ralgapa1-201ENSMUST00000085385 7901 ntAPPRIS P2 TSL 1 (best) BASIC15.28■□□□□ 0.04
Ldb1P70662 Nhlh2-202ENSMUST00000196324 2647 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Retrieved 100 of 76,532 protein–RNA pairs in 51.5 ms