Protein–RNA interactions for Protein: P70271

Pdlim4, PDZ and LIM domain protein 4, mousemouse

Predictions only

Length 330 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pdlim4P70271 Rgp1-201ENSMUST00000030190 1292 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Pdlim4P70271 Apopt1-201ENSMUST00000040519 1065 ntAPPRIS P3 TSL 1 (best) BASIC12.79□□□□□ -0.36
Pdlim4P70271 Manbal-201ENSMUST00000081202 1107 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Pdlim4P70271 Mrc2-202ENSMUST00000100335 5795 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Pdlim4P70271 Six1-201ENSMUST00000050029 3316 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Pdlim4P70271 9430015G10Rik-208ENSMUST00000169550 2660 ntAPPRIS P1 TSL 5 BASIC12.79□□□□□ -0.36
Pdlim4P70271 Fam178b-201ENSMUST00000114981 1659 ntAPPRIS P3 TSL 1 (best) BASIC12.79□□□□□ -0.36
Pdlim4P70271 Irf3-201ENSMUST00000003284 2031 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Pdlim4P70271 Cdkn1b-201ENSMUST00000003115 2393 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Pdlim4P70271 Parp6-201ENSMUST00000026267 2709 ntAPPRIS P1 TSL 5 BASIC12.79□□□□□ -0.36
Pdlim4P70271 Diras2-201ENSMUST00000057442 4786 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Pdlim4P70271 Rmdn1-201ENSMUST00000029888 1734 ntAPPRIS P2 TSL 1 (best) BASIC12.79□□□□□ -0.36
Pdlim4P70271 Plekha4-207ENSMUST00000211227 2133 ntAPPRIS ALT2 TSL 1 (best) BASIC12.79□□□□□ -0.36
Pdlim4P70271 Chrm4-201ENSMUST00000045537 1440 ntAPPRIS P1 BASIC12.79□□□□□ -0.36
Pdlim4P70271 Adgrl1-210ENSMUST00000152978 5734 ntTSL 5 BASIC12.79□□□□□ -0.36
Pdlim4P70271 Rsrc1-205ENSMUST00000161726 3213 ntAPPRIS P2 TSL 1 (best) BASIC12.79□□□□□ -0.36
Pdlim4P70271 Paxbp1-202ENSMUST00000118522 3973 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Pdlim4P70271 Wnt5b-201ENSMUST00000117171 2174 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Pdlim4P70271 Dse-201ENSMUST00000048010 4389 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Pdlim4P70271 Letmd1-201ENSMUST00000037001 2579 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Pdlim4P70271 Hoxb8-201ENSMUST00000052650 2635 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Pdlim4P70271 Elavl3-203ENSMUST00000215901 3037 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Pdlim4P70271 Trpv4-203ENSMUST00000112219 2295 ntTSL 5 BASIC12.78□□□□□ -0.36
Pdlim4P70271 Fbxo30-202ENSMUST00000129456 5060 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Pdlim4P70271 Kif1c-203ENSMUST00000102554 6684 ntAPPRIS P2 TSL 5 BASIC12.78□□□□□ -0.36
Pdlim4P70271 Gm4353-201ENSMUST00000111755 1559 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Pdlim4P70271 Nup35-201ENSMUST00000028382 1559 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Pdlim4P70271 Gipc2-201ENSMUST00000046614 1596 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Pdlim4P70271 Podn-203ENSMUST00000106709 3170 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Pdlim4P70271 Phf21b-203ENSMUST00000159939 3639 ntAPPRIS P2 TSL 1 (best) BASIC12.78□□□□□ -0.36
Pdlim4P70271 Large2-201ENSMUST00000068586 2445 ntAPPRIS P3 TSL 1 (best) BASIC12.78□□□□□ -0.36
Pdlim4P70271 Islr2-205ENSMUST00000170421 4071 ntAPPRIS P3 TSL 3 BASIC12.78□□□□□ -0.36
Pdlim4P70271 Sgms1-201ENSMUST00000099514 3665 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Pdlim4P70271 Pde4d-208ENSMUST00000120671 2455 ntTSL 5 BASIC12.78□□□□□ -0.36
Pdlim4P70271 Itsn1-202ENSMUST00000064797 7418 ntAPPRIS ALT2 TSL 5 BASIC12.78□□□□□ -0.36
Pdlim4P70271 Cnbp-203ENSMUST00000113619 1661 ntAPPRIS P2 TSL 1 (best) BASIC12.78□□□□□ -0.36
Pdlim4P70271 Axin1-201ENSMUST00000074370 3777 ntAPPRIS P3 TSL 1 (best) BASIC12.78□□□□□ -0.36
Pdlim4P70271 Entpd6-201ENSMUST00000094467 2540 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Pdlim4P70271 B9d2-201ENSMUST00000108403 1021 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Pdlim4P70271 Rps13-ps1-201ENSMUST00000183478 538 ntBASIC12.78□□□□□ -0.36
Pdlim4P70271 Timm10b-211ENSMUST00000210350 529 ntAPPRIS ALT2 TSL 2 BASIC12.78□□□□□ -0.36
Pdlim4P70271 AC164629.2-201ENSMUST00000217916 270 ntBASIC12.78□□□□□ -0.36
Pdlim4P70271 Gm7461-201ENSMUST00000058918 827 ntBASIC12.78□□□□□ -0.36
Pdlim4P70271 4930431F12Rik-201ENSMUST00000079389 429 ntTSL 5 BASIC12.78□□□□□ -0.36
Pdlim4P70271 Gm44616-201ENSMUST00000206417 1732 ntBASIC12.78□□□□□ -0.36
Pdlim4P70271 Cry1-201ENSMUST00000020227 3026 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Pdlim4P70271 Pcolce2-201ENSMUST00000015498 4438 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Pdlim4P70271 Mvd-201ENSMUST00000006692 1756 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Pdlim4P70271 Tmem94-201ENSMUST00000093912 5329 ntAPPRIS P2 TSL 1 (best) BASIC12.78□□□□□ -0.36
Pdlim4P70271 Ugcg-201ENSMUST00000030074 4012 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Pdlim4P70271 Kif1c-201ENSMUST00000072187 5046 ntAPPRIS ALT2 TSL 1 (best) BASIC12.78□□□□□ -0.36
Pdlim4P70271 Gm26702-201ENSMUST00000181730 4570 ntTSL 5 BASIC12.78□□□□□ -0.36
Pdlim4P70271 Agbl3-205ENSMUST00000115017 3719 ntAPPRIS P3 TSL 1 (best) BASIC12.78□□□□□ -0.36
Pdlim4P70271 Pla2g16-203ENSMUST00000136756 1901 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Pdlim4P70271 Parp3-203ENSMUST00000123555 2495 ntAPPRIS P3 TSL 1 (best) BASIC12.78□□□□□ -0.36
Pdlim4P70271 Col4a2-201ENSMUST00000033899 6450 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Pdlim4P70271 Prob1-201ENSMUST00000097619 3021 ntBASIC12.78□□□□□ -0.36
Pdlim4P70271 Rcn2-201ENSMUST00000114276 2024 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Pdlim4P70271 Cadps2-206ENSMUST00000115361 4571 ntAPPRIS ALT2 TSL 1 (best) BASIC12.78□□□□□ -0.36
Pdlim4P70271 Sorbs1-213ENSMUST00000225153 3589 ntAPPRIS P4 BASIC12.78□□□□□ -0.36
Pdlim4P70271 Dctd-203ENSMUST00000170263 2096 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
Pdlim4P70271 Dact1-201ENSMUST00000061273 3650 ntTSL 1 (best) BASIC12.77□□□□□ -0.36
Pdlim4P70271 Sh2d4a-201ENSMUST00000066594 2718 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
Pdlim4P70271 Unc5a-202ENSMUST00000109994 3827 ntAPPRIS ALT2 TSL 1 (best) BASIC12.77□□□□□ -0.36
Pdlim4P70271 Elp6-201ENSMUST00000068071 2219 ntTSL 1 (best) BASIC12.77□□□□□ -0.36
Pdlim4P70271 AC131104.1-201ENSMUST00000222118 1739 ntTSL 5 BASIC12.77□□□□□ -0.36
Pdlim4P70271 Sgpl1-202ENSMUST00000122259 4102 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
Pdlim4P70271 Pnkp-203ENSMUST00000107876 1770 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
Pdlim4P70271 Loxl2-201ENSMUST00000022660 5316 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
Pdlim4P70271 Asf1b-201ENSMUST00000005607 1788 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
Pdlim4P70271 Pgm2-201ENSMUST00000058351 2371 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
Pdlim4P70271 Atp11b-201ENSMUST00000029257 4868 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Pdlim4P70271 Ndufb6-202ENSMUST00000108108 480 ntTSL 3 BASIC12.77□□□□□ -0.37
Pdlim4P70271 1700023H06Rik-201ENSMUST00000161006 1044 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
Pdlim4P70271 Pym1-202ENSMUST00000163377 1158 ntAPPRIS P4 TSL 1 (best) BASIC12.77□□□□□ -0.37
Pdlim4P70271 Gm26661-201ENSMUST00000181025 471 ntAPPRIS P1 BASIC12.77□□□□□ -0.37
Pdlim4P70271 1700028B04Rik-202ENSMUST00000190841 971 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
Pdlim4P70271 6430573P05Rik-202ENSMUST00000192648 597 ntTSL 3 BASIC12.77□□□□□ -0.37
Pdlim4P70271 Krtcap3-208ENSMUST00000201937 889 ntAPPRIS P1 TSL 5 BASIC12.77□□□□□ -0.37
Pdlim4P70271 Gm18195-201ENSMUST00000207604 706 ntBASIC12.77□□□□□ -0.37
Pdlim4P70271 Zfp524-202ENSMUST00000207901 1263 ntAPPRIS P1 TSL 5 BASIC12.77□□□□□ -0.37
Pdlim4P70271 D530014G21Rik-201ENSMUST00000208416 587 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
Pdlim4P70271 Syce1l-204ENSMUST00000212269 753 ntAPPRIS ALT2 TSL 1 (best) BASIC12.77□□□□□ -0.37
Pdlim4P70271 Mrpl17-201ENSMUST00000033170 1028 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
Pdlim4P70271 Lrrc24-202ENSMUST00000049956 1904 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Pdlim4P70271 March4-201ENSMUST00000047786 4553 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Pdlim4P70271 Smox-208ENSMUST00000110188 1991 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
Pdlim4P70271 Chst14-202ENSMUST00000110837 1991 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
Pdlim4P70271 Fut7-203ENSMUST00000114278 1990 ntAPPRIS P3 TSL 1 (best) BASIC12.77□□□□□ -0.37
Pdlim4P70271 Sgta-202ENSMUST00000218208 1964 ntAPPRIS ALT1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Pdlim4P70271 Fut7-201ENSMUST00000041654 1970 ntAPPRIS P3 TSL 5 BASIC12.77□□□□□ -0.37
Pdlim4P70271 Dclk2-201ENSMUST00000029719 4012 ntAPPRIS P3 TSL 1 (best) BASIC12.77□□□□□ -0.37
Pdlim4P70271 Rnf123-201ENSMUST00000047746 4722 ntAPPRIS ALT2 TSL 5 BASIC12.77□□□□□ -0.37
Pdlim4P70271 Mrps2-201ENSMUST00000038600 2080 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Pdlim4P70271 Shcbp1l-201ENSMUST00000042373 2092 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Pdlim4P70271 Atp13a3-201ENSMUST00000061350 7220 ntAPPRIS ALT2 TSL 5 BASIC12.77□□□□□ -0.37
Pdlim4P70271 Hmgn1-201ENSMUST00000050884 2174 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Pdlim4P70271 Gm29208-203ENSMUST00000213687 2219 ntTSL 5 BASIC12.77□□□□□ -0.37
Pdlim4P70271 Rbm42-202ENSMUST00000108141 1526 ntAPPRIS ALT2 TSL 5 BASIC12.77□□□□□ -0.37
Pdlim4P70271 Hectd2-201ENSMUST00000047247 4731 ntAPPRIS P3 TSL 1 (best) BASIC12.77□□□□□ -0.37
Retrieved 100 of 76,532 protein–RNA pairs in 21.2 ms