Protein–RNA interactions for Protein: P62960

Ybx1, Nuclease-sensitive element-binding protein 1, mousemouse

Known RBP Predictions only

Length 322 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ybx1P62960 Rnf145-201ENSMUST00000019333 3570 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Ybx1P62960 AC130669.1-201ENSMUST00000228537 1672 ntBASIC15.7■□□□□ 0.1
Ybx1P62960 Ptbp2-213ENSMUST00000200097 3777 ntAPPRIS ALT1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Ybx1P62960 Gm20708-201ENSMUST00000132298 1780 ntAPPRIS P1 TSL 2 BASIC15.7■□□□□ 0.1
Ybx1P62960 AC025913.2-201ENSMUST00000220136 1766 ntBASIC15.7■□□□□ 0.1
Ybx1P62960 Ssu2-201ENSMUST00000060847 1321 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Ybx1P62960 Tnfsf13-202ENSMUST00000108648 1503 ntAPPRIS ALT2 TSL 5 BASIC15.69■□□□□ 0.1
Ybx1P62960 Ephb1-203ENSMUST00000149800 3471 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
Ybx1P62960 Smad1-203ENSMUST00000109885 3775 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
Ybx1P62960 Ddhd1-201ENSMUST00000051310 5012 ntAPPRIS P3 TSL 1 (best) BASIC15.69■□□□□ 0.1
Ybx1P62960 Ehmt2-202ENSMUST00000078061 3746 ntAPPRIS ALT2 TSL 1 (best) BASIC15.69■□□□□ 0.1
Ybx1P62960 Hist1h3e-201ENSMUST00000105107 836 ntAPPRIS P1 BASIC15.69■□□□□ 0.1
Ybx1P62960 Lgals3-204ENSMUST00000150290 1298 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Ybx1P62960 Mpped1-210ENSMUST00000172115 795 ntTSL 3 BASIC15.69■□□□□ 0.1
Ybx1P62960 Mpped1-211ENSMUST00000172398 795 ntTSL 3 BASIC15.69■□□□□ 0.1
Ybx1P62960 Gm10499-201ENSMUST00000174094 934 ntBASIC15.69■□□□□ 0.1
Ybx1P62960 Pecr-201ENSMUST00000027381 1186 ntAPPRIS P2 TSL 1 (best) BASIC15.69■□□□□ 0.1
Ybx1P62960 Smim4-202ENSMUST00000064032 791 ntTSL 3 BASIC15.69■□□□□ 0.1
Ybx1P62960 Prmt6-203ENSMUST00000190378 3051 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Ybx1P62960 Rab11fip5-202ENSMUST00000204087 6119 ntAPPRIS ALT2 TSL 1 (best) BASIC15.69■□□□□ 0.1
Ybx1P62960 Tes-202ENSMUST00000115467 2440 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Ybx1P62960 Gm13337-201ENSMUST00000119183 1594 ntBASIC15.69■□□□□ 0.1
Ybx1P62960 Tmem88-201ENSMUST00000050140 1582 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Ybx1P62960 Gm43072-201ENSMUST00000200283 1671 ntBASIC15.69■□□□□ 0.1
Ybx1P62960 AC126250.1-201ENSMUST00000228343 1768 ntBASIC15.69■□□□□ 0.1
Ybx1P62960 Lrrc42-201ENSMUST00000030360 1755 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Ybx1P62960 H2-Q4-201ENSMUST00000081435 1793 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Ybx1P62960 Gramd4-204ENSMUST00000138134 4292 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
Ybx1P62960 Gnb1-201ENSMUST00000030940 3131 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Ybx1P62960 B3galt6-201ENSMUST00000052185 3184 ntAPPRIS P1 BASIC15.69■□□□□ 0.1
Ybx1P62960 BC037032-204ENSMUST00000155191 3291 ntTSL 5 BASIC15.69■□□□□ 0.1
Ybx1P62960 Gm7669-201ENSMUST00000210184 1603 ntBASIC15.68■□□□□ 0.1
Ybx1P62960 Rnf122-205ENSMUST00000217278 1726 ntAPPRIS ALT1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Ybx1P62960 Plscr3-202ENSMUST00000108632 1835 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Ybx1P62960 Nuak1-201ENSMUST00000020220 5558 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Ybx1P62960 Tbc1d2-202ENSMUST00000107750 1941 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
Ybx1P62960 Lman1-202ENSMUST00000120461 2208 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Ybx1P62960 Zfp995-205ENSMUST00000190066 2221 ntAPPRIS P1 TSL 2 BASIC15.68■□□□□ 0.1
Ybx1P62960 Hsdl2-201ENSMUST00000030078 2611 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Ybx1P62960 Rcc2-201ENSMUST00000038893 3767 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Ybx1P62960 Tmem248-202ENSMUST00000111298 3570 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Ybx1P62960 Chpf-202ENSMUST00000094818 3065 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
Ybx1P62960 Irf1-201ENSMUST00000019043 2069 ntAPPRIS P3 TSL 1 (best) BASIC15.68■□□□□ 0.1
Ybx1P62960 4930544D05Rik-203ENSMUST00000144960 624 ntAPPRIS P2 TSL 5 BASIC15.68■□□□□ 0.1
Ybx1P62960 1700108N11Rik-201ENSMUST00000153051 917 ntTSL 2 BASIC15.68■□□□□ 0.1
Ybx1P62960 Dynlt1b-201ENSMUST00000179569 768 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Ybx1P62960 CT025555.1-201ENSMUST00000225901 1217 ntBASIC15.68■□□□□ 0.1
Ybx1P62960 Pold4-201ENSMUST00000025773 910 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Ybx1P62960 Tst-201ENSMUST00000058659 1096 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Ybx1P62960 Ccdc172-201ENSMUST00000069419 1086 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Ybx1P62960 Gm45212-201ENSMUST00000205831 3403 ntBASIC15.68■□□□□ 0.1
Ybx1P62960 Wipi1-201ENSMUST00000047186 3338 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
Ybx1P62960 Acat3-201ENSMUST00000043923 2123 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Ybx1P62960 Pdzd11-201ENSMUST00000015812 1626 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Ybx1P62960 Ap3s1-201ENSMUST00000025357 1520 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Ybx1P62960 Smarcc1-204ENSMUST00000197984 3538 ntAPPRIS ALT2 TSL 1 (best) BASIC15.68■□□□□ 0.1
Ybx1P62960 Gm13410-201ENSMUST00000117058 1415 ntBASIC15.68■□□□□ 0.1
Ybx1P62960 Thap6-204ENSMUST00000193925 1337 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
Ybx1P62960 Gm6018-201ENSMUST00000216090 1306 ntBASIC15.68■□□□□ 0.1
Ybx1P62960 Shcbp1l-201ENSMUST00000042373 2092 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Ybx1P62960 Slc9a6-202ENSMUST00000114784 4449 ntTSL 5 BASIC15.67■□□□□ 0.1
Ybx1P62960 Fam241b-204ENSMUST00000125704 1769 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Ybx1P62960 Zfp358-203ENSMUST00000208423 2200 ntAPPRIS P1 BASIC15.67■□□□□ 0.1
Ybx1P62960 Dpagt1-201ENSMUST00000054708 2205 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Ybx1P62960 Nudt18-203ENSMUST00000228768 1578 ntBASIC15.67■□□□□ 0.1
Ybx1P62960 Lhx5-201ENSMUST00000031591 2689 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Ybx1P62960 Syn1-201ENSMUST00000081893 3209 ntAPPRIS P4 TSL 5 BASIC15.67■□□□□ 0.1
Ybx1P62960 Ipo9-201ENSMUST00000041023 6247 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Ybx1P62960 Cmc2-202ENSMUST00000128304 394 ntTSL 5 BASIC15.67■□□□□ 0.1
Ybx1P62960 Gm15825-201ENSMUST00000159108 918 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
Ybx1P62960 Gm20661-203ENSMUST00000177368 900 ntAPPRIS P1 TSL 2 BASIC15.67■□□□□ 0.1
Ybx1P62960 Gm5914-202ENSMUST00000182863 375 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
Ybx1P62960 4930448I06Rik-201ENSMUST00000194002 546 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
Ybx1P62960 AC160980.1-201ENSMUST00000224136 970 ntBASIC15.67■□□□□ 0.1
Ybx1P62960 Smdt1-201ENSMUST00000023086 705 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Ybx1P62960 Aga-201ENSMUST00000033920 1181 ntAPPRIS P3 TSL 1 (best) BASIC15.67■□□□□ 0.1
Ybx1P62960 Hs3st5-203ENSMUST00000168572 2715 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Ybx1P62960 Mllt1-201ENSMUST00000025053 3608 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Ybx1P62960 Fam135a-201ENSMUST00000027337 5536 ntAPPRIS P2 TSL 5 BASIC15.67■□□□□ 0.1
Ybx1P62960 Gprc5b-201ENSMUST00000008878 4518 ntAPPRIS P3 TSL 1 (best) BASIC15.67■□□□□ 0.1
Ybx1P62960 Arfgap2-202ENSMUST00000080008 3068 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Ybx1P62960 Sfrp1-201ENSMUST00000033952 4372 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Ybx1P62960 Gm16976-201ENSMUST00000099718 1894 ntTSL 5 BASIC15.67■□□□□ 0.1
Ybx1P62960 Camk2d-221ENSMUST00000171289 2217 ntTSL 5 BASIC15.67■□□□□ 0.1
Ybx1P62960 P4ha2-201ENSMUST00000019050 2230 ntAPPRIS P1 TSL 5 BASIC15.67■□□□□ 0.1
Ybx1P62960 Tcf24-202ENSMUST00000185184 4193 ntAPPRIS P1 TSL 5 BASIC15.67■□□□□ 0.1
Ybx1P62960 Rnf14-203ENSMUST00000171461 3351 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Ybx1P62960 Ldha-201ENSMUST00000005051 1766 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Ybx1P62960 Fgf13-201ENSMUST00000033473 2499 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Ybx1P62960 4930524O07Rik-203ENSMUST00000193135 2289 ntBASIC15.66■□□□□ 0.1
Ybx1P62960 Ccdc181-201ENSMUST00000027867 1909 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Ybx1P62960 Nap1l4-201ENSMUST00000072727 2285 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
Ybx1P62960 Ltbp4-202ENSMUST00000108369 5377 ntAPPRIS ALT2 TSL 5 BASIC15.66■□□□□ 0.1
Ybx1P62960 Man2a2-201ENSMUST00000098346 6554 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Ybx1P62960 Mrps2-201ENSMUST00000038600 2080 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Ybx1P62960 Prob1-201ENSMUST00000097619 3021 ntBASIC15.66■□□□□ 0.1
Ybx1P62960 Gm4756-201ENSMUST00000207585 1716 ntTSL 5 BASIC15.66■□□□□ 0.1
Ybx1P62960 Vldlr-202ENSMUST00000047645 3260 ntTSL 5 BASIC15.66■□□□□ 0.1
Ybx1P62960 Zmynd11-204ENSMUST00000110635 3881 ntTSL 5 BASIC15.66■□□□□ 0.1
Ybx1P62960 Bnip2-202ENSMUST00000085393 2328 ntAPPRIS ALT2 TSL 1 (best) BASIC15.66■□□□□ 0.1
Retrieved 100 of 76,532 protein–RNA pairs in 54.9 ms