Protein–RNA interactions for Protein: P62892

Rpl39, 60S ribosomal protein L39, mousemouse

Predictions only

Length 51 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rpl39P62892 Lmf1-201ENSMUST00000063344 1861 ntAPPRIS ALT2 TSL 5 BASIC10.98□□□□□ -0.65
Rpl39P62892 F2-201ENSMUST00000028681 1988 ntAPPRIS P2 TSL 1 (best) BASIC10.97□□□□□ -0.65
Rpl39P62892 Dhodh-201ENSMUST00000123605 2039 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
Rpl39P62892 Zfp446-204ENSMUST00000108537 2178 ntAPPRIS ALT2 TSL 1 (best) BASIC10.97□□□□□ -0.65
Rpl39P62892 Ggn-204ENSMUST00000208330 2205 ntAPPRIS ALT2 TSL 5 BASIC10.97□□□□□ -0.65
Rpl39P62892 Gm11946-201ENSMUST00000123459 3941 ntTSL 1 (best) BASIC10.97□□□□□ -0.65
Rpl39P62892 Qsox1-207ENSMUST00000194632 2433 ntAPPRIS ALT2 TSL 1 (best) BASIC10.97□□□□□ -0.65
Rpl39P62892 Dr1-201ENSMUST00000031190 3085 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
Rpl39P62892 Ttpa-202ENSMUST00000117632 3123 ntTSL 5 BASIC10.97□□□□□ -0.65
Rpl39P62892 Hilpda-202ENSMUST00000115289 658 ntAPPRIS P1 TSL 3 BASIC10.97□□□□□ -0.65
Rpl39P62892 Atf7ip2-204ENSMUST00000119023 1048 ntTSL 1 (best) BASIC10.97□□□□□ -0.65
Rpl39P62892 Rbmx-206ENSMUST00000143310 1296 ntTSL 5 BASIC10.97□□□□□ -0.65
Rpl39P62892 Gm20760-201ENSMUST00000179197 648 ntBASIC10.97□□□□□ -0.65
Rpl39P62892 Zfp787-204ENSMUST00000207628 576 ntTSL 1 (best) BASIC10.97□□□□□ -0.65
Rpl39P62892 BC048679-203ENSMUST00000207871 567 ntAPPRIS ALT2 TSL 1 (best) BASIC10.97□□□□□ -0.65
Rpl39P62892 Ccnj-201ENSMUST00000025983 3819 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
Rpl39P62892 Iscu-201ENSMUST00000026937 957 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
Rpl39P62892 Lce1m-201ENSMUST00000029520 874 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
Rpl39P62892 Nme2-202ENSMUST00000072566 734 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
Rpl39P62892 Fxn-201ENSMUST00000081333 1114 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
Rpl39P62892 Tmem35b-201ENSMUST00000094712 1120 ntAPPRIS P2 TSL 1 (best) BASIC10.97□□□□□ -0.65
Rpl39P62892 Mesd-201ENSMUST00000094215 4492 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
Rpl39P62892 Gm7669-201ENSMUST00000210184 1603 ntBASIC10.97□□□□□ -0.65
Rpl39P62892 Selenok-201ENSMUST00000112268 1678 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
Rpl39P62892 Arhgef9-217ENSMUST00000197364 1796 ntTSL 5 BASIC10.97□□□□□ -0.65
Rpl39P62892 Ccdc174-201ENSMUST00000037783 1752 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
Rpl39P62892 Dnase1l2-201ENSMUST00000088506 1921 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
Rpl39P62892 Slc52a3-203ENSMUST00000109859 2204 ntTSL 5 BASIC10.97□□□□□ -0.65
Rpl39P62892 Chd4-203ENSMUST00000112392 6652 ntAPPRIS ALT2 TSL 5 BASIC10.97□□□□□ -0.65
Rpl39P62892 Large2-202ENSMUST00000090582 2291 ntTSL 1 (best) BASIC10.97□□□□□ -0.65
Rpl39P62892 0610005C13Rik-207ENSMUST00000210866 2434 ntTSL 1 (best) BASIC10.97□□□□□ -0.65
Rpl39P62892 Ebf4-202ENSMUST00000110287 2580 ntAPPRIS ALT2 TSL 5 BASIC10.97□□□□□ -0.65
Rpl39P62892 Slc18b1-206ENSMUST00000179321 2843 ntTSL 5 BASIC10.97□□□□□ -0.65
Rpl39P62892 Arhgef33-202ENSMUST00000223878 3253 ntAPPRIS P1 BASIC10.97□□□□□ -0.65
Rpl39P62892 Arhgef33-201ENSMUST00000068175 3260 ntAPPRIS P1 TSL 5 BASIC10.97□□□□□ -0.65
Rpl39P62892 Acot3-201ENSMUST00000021653 3431 ntAPPRIS P3 TSL 1 (best) BASIC10.97□□□□□ -0.65
Rpl39P62892 Sipa1-203ENSMUST00000164304 3614 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
Rpl39P62892 Sema4b-204ENSMUST00000205822 3760 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
Rpl39P62892 Elmsan1-202ENSMUST00000110294 7156 ntAPPRIS P1 TSL 5 BASIC10.97□□□□□ -0.65
Rpl39P62892 S100pbp-204ENSMUST00000106061 4426 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.65
Rpl39P62892 Gnpat-201ENSMUST00000034466 2984 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.65
Rpl39P62892 Prrg4-201ENSMUST00000028593 2872 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.65
Rpl39P62892 Ablim2-205ENSMUST00000114205 2579 ntAPPRIS ALT2 TSL 5 BASIC10.96□□□□□ -0.65
Rpl39P62892 Sfta3-ps-205ENSMUST00000220379 2187 ntTSL 1 (best) BASIC10.96□□□□□ -0.65
Rpl39P62892 Ak1-203ENSMUST00000113278 2085 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.65
Rpl39P62892 Gss-201ENSMUST00000079691 1963 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.65
Rpl39P62892 Camk2g-217ENSMUST00000226630 1937 ntBASIC10.96□□□□□ -0.65
Rpl39P62892 Dnajc28-201ENSMUST00000049244 1891 ntAPPRIS ALT2 TSL 1 (best) BASIC10.96□□□□□ -0.65
Rpl39P62892 Tdrd12-201ENSMUST00000032701 1620 ntTSL 1 (best) BASIC10.96□□□□□ -0.65
Rpl39P62892 Mir124-2hg-202ENSMUST00000186746 1368 ntTSL 1 (best) BASIC10.96□□□□□ -0.65
Rpl39P62892 Wbp1-202ENSMUST00000113936 1314 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.65
Rpl39P62892 Rbm39-202ENSMUST00000109584 667 ntTSL 5 BASIC10.96□□□□□ -0.65
Rpl39P62892 Gm17178-201ENSMUST00000163273 357 ntTSL 5 BASIC10.96□□□□□ -0.65
Rpl39P62892 Rpl14-201ENSMUST00000165532 1009 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.65
Rpl39P62892 Gm10052-201ENSMUST00000168019 960 ntBASIC10.96□□□□□ -0.65
Rpl39P62892 Gm17035-201ENSMUST00000170557 419 ntTSL 3 BASIC10.96□□□□□ -0.65
Rpl39P62892 Prr3-209ENSMUST00000174849 581 ntTSL 2 BASIC10.96□□□□□ -0.65
Rpl39P62892 AC122351.1-201ENSMUST00000220467 126 ntBASIC10.96□□□□□ -0.65
Rpl39P62892 Srrd-201ENSMUST00000031289 1110 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.65
Rpl39P62892 Sox6os-201ENSMUST00000032900 420 ntTSL 1 (best) BASIC10.96□□□□□ -0.65
Rpl39P62892 Gm7729-201ENSMUST00000050143 801 ntBASIC10.96□□□□□ -0.65
Rpl39P62892 Ints3-203ENSMUST00000196530 3778 ntAPPRIS ALT2 TSL 1 (best) BASIC10.96□□□□□ -0.65
Rpl39P62892 Emilin3-201ENSMUST00000057169 3547 ntAPPRIS P3 TSL 1 (best) BASIC10.96□□□□□ -0.65
Rpl39P62892 Gm996-203ENSMUST00000188161 2925 ntAPPRIS P1 BASIC10.96□□□□□ -0.66
Rpl39P62892 Smoc2-201ENSMUST00000024660 2832 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.66
Rpl39P62892 Cnksr2-202ENSMUST00000112513 4471 ntTSL 5 BASIC10.96□□□□□ -0.66
Rpl39P62892 Dtd2-201ENSMUST00000021339 2564 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.66
Rpl39P62892 Pid1-207ENSMUST00000177458 2521 ntTSL 2 BASIC10.96□□□□□ -0.66
Rpl39P62892 Hdhd2-203ENSMUST00000097522 2318 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.66
Rpl39P62892 Wfikkn1-201ENSMUST00000095487 1981 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.66
Rpl39P62892 Dstyk-204ENSMUST00000188389 3232 ntTSL 5 BASIC10.96□□□□□ -0.66
Rpl39P62892 Eif4ebp2-201ENSMUST00000020288 5784 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.66
Rpl39P62892 Rnf152-201ENSMUST00000058688 8492 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Rpl39P62892 Gmppa-202ENSMUST00000113584 1692 ntAPPRIS P1 TSL 5 BASIC10.95□□□□□ -0.66
Rpl39P62892 Cnbp-203ENSMUST00000113619 1661 ntAPPRIS P2 TSL 1 (best) BASIC10.95□□□□□ -0.66
Rpl39P62892 Men1-206ENSMUST00000113502 2652 ntTSL 1 (best) BASIC10.95□□□□□ -0.66
Rpl39P62892 Rab17-204ENSMUST00000131428 1557 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Rpl39P62892 Bnip2-203ENSMUST00000117450 1465 ntAPPRIS ALT2 TSL 1 (best) BASIC10.95□□□□□ -0.66
Rpl39P62892 Cct7-201ENSMUST00000032078 2441 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Rpl39P62892 Ppef2-201ENSMUST00000031359 2274 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Rpl39P62892 Bdkrb1-202ENSMUST00000182899 1313 ntAPPRIS P1 TSL 5 BASIC10.95□□□□□ -0.66
Rpl39P62892 Bdkrb1-201ENSMUST00000041229 1338 ntAPPRIS P1 BASIC10.95□□□□□ -0.66
Rpl39P62892 Mfsd2a-201ENSMUST00000030408 2151 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Rpl39P62892 Cenps-202ENSMUST00000105695 544 ntTSL 1 (best) BASIC10.95□□□□□ -0.66
Rpl39P62892 0610009B22Rik-202ENSMUST00000109098 892 ntAPPRIS P1 TSL 3 BASIC10.95□□□□□ -0.66
Rpl39P62892 Bhlhe41-202ENSMUST00000111703 744 ntTSL 3 BASIC10.95□□□□□ -0.66
Rpl39P62892 Sytl3-204ENSMUST00000159880 1296 ntTSL 5 BASIC10.95□□□□□ -0.66
Rpl39P62892 Cdc34-202ENSMUST00000166603 1078 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Rpl39P62892 Pcyox1-206ENSMUST00000204116 546 ntTSL 5 BASIC10.95□□□□□ -0.66
Rpl39P62892 Gm45442-201ENSMUST00000210038 411 ntTSL 3 BASIC10.95□□□□□ -0.66
Rpl39P62892 Pldi-201ENSMUST00000036304 853 ntTSL 2 BASIC10.95□□□□□ -0.66
Rpl39P62892 Prmt1-201ENSMUST00000045325 1071 ntTSL 5 BASIC10.95□□□□□ -0.66
Rpl39P62892 Aprt-201ENSMUST00000006764 849 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Rpl39P62892 Olfr317-201ENSMUST00000075607 1128 ntAPPRIS P1 BASIC10.95□□□□□ -0.66
Rpl39P62892 Pcbp3-201ENSMUST00000001148 2013 ntAPPRIS P3 TSL 1 (best) BASIC10.95□□□□□ -0.66
Rpl39P62892 Slc10a3-202ENSMUST00000073067 1910 ntAPPRIS P2 TSL 1 (best) BASIC10.95□□□□□ -0.66
Rpl39P62892 Anks1b-205ENSMUST00000179694 2663 ntTSL 5 BASIC10.95□□□□□ -0.66
Rpl39P62892 Ncmap-204ENSMUST00000105859 1801 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Rpl39P62892 A430034D21Rik-201ENSMUST00000194339 1802 ntTSL 1 (best) BASIC10.95□□□□□ -0.66
Rpl39P62892 Asf1b-201ENSMUST00000005607 1788 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Retrieved 100 of 76,532 protein–RNA pairs in 35.7 ms