Protein–RNA interactions for Protein: P59708

Sf3b6, Splicing factor 3B subunit 6, mousemouse

Known RBP Predictions only

Length 125 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sf3b6P59708 Crmp1-202ENSMUST00000114158 3051 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
Sf3b6P59708 Leng9-201ENSMUST00000058358 2460 ntAPPRIS P1 BASIC13.64□□□□□ -0.23
Sf3b6P59708 Lap3-201ENSMUST00000046122 2267 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Sf3b6P59708 Clec2h-201ENSMUST00000032518 2160 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Sf3b6P59708 Npb-202ENSMUST00000106194 530 ntAPPRIS ALT2 TSL 2 BASIC13.64□□□□□ -0.23
Sf3b6P59708 Npb-203ENSMUST00000106195 542 ntAPPRIS P3 TSL 1 (best) BASIC13.64□□□□□ -0.23
Sf3b6P59708 Spint2-202ENSMUST00000108236 1211 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
Sf3b6P59708 Gm9013-201ENSMUST00000132939 882 ntBASIC13.64□□□□□ -0.23
Sf3b6P59708 Rfesd-202ENSMUST00000167271 595 ntAPPRIS P1 TSL 2 BASIC13.64□□□□□ -0.23
Sf3b6P59708 Gm6728-201ENSMUST00000178117 1065 ntBASIC13.64□□□□□ -0.23
Sf3b6P59708 AC114585.2-202ENSMUST00000228094 426 ntBASIC13.64□□□□□ -0.23
Sf3b6P59708 Krtap1-5-201ENSMUST00000054532 1041 ntAPPRIS P1 BASIC13.64□□□□□ -0.23
Sf3b6P59708 Npw-201ENSMUST00000095544 638 ntAPPRIS ALT2 TSL 1 (best) BASIC13.64□□□□□ -0.23
Sf3b6P59708 Tmtc4-201ENSMUST00000037726 3416 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Sf3b6P59708 Bag4-201ENSMUST00000038498 4876 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Sf3b6P59708 Ptpn6-203ENSMUST00000171549 2226 ntAPPRIS ALT2 TSL 1 (best) BASIC13.64□□□□□ -0.23
Sf3b6P59708 Smg9-201ENSMUST00000002280 2242 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Sf3b6P59708 Wnt11-201ENSMUST00000067495 3451 ntAPPRIS P1 TSL 5 BASIC13.64□□□□□ -0.23
Sf3b6P59708 Gm28496-202ENSMUST00000137742 2752 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
Sf3b6P59708 Ccdc68-201ENSMUST00000043929 1618 ntAPPRIS P2 TSL 1 (best) BASIC13.64□□□□□ -0.23
Sf3b6P59708 Prr15-201ENSMUST00000059138 1511 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Sf3b6P59708 Ankrd23-202ENSMUST00000193083 2277 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
Sf3b6P59708 Zpbp2-202ENSMUST00000081033 1300 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
Sf3b6P59708 Hmgn1-201ENSMUST00000050884 2174 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Sf3b6P59708 Mbp-202ENSMUST00000062446 2186 ntAPPRIS P4 TSL 1 (best) BASIC13.64□□□□□ -0.23
Sf3b6P59708 Grid2-201ENSMUST00000095852 5860 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Sf3b6P59708 Irx3os-201ENSMUST00000062522 2988 ntTSL 5 BASIC13.63□□□□□ -0.23
Sf3b6P59708 Rbm26-201ENSMUST00000022715 3633 ntTSL 5 BASIC13.63□□□□□ -0.23
Sf3b6P59708 Tmem40-202ENSMUST00000112946 1554 ntAPPRIS ALT2 TSL 1 (best) BASIC13.63□□□□□ -0.23
Sf3b6P59708 Ush1g-201ENSMUST00000103037 3306 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Sf3b6P59708 Rad18-202ENSMUST00000077088 2577 ntAPPRIS P3 TSL 1 (best) BASIC13.63□□□□□ -0.23
Sf3b6P59708 Zfp668-204ENSMUST00000106263 3132 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Sf3b6P59708 Fbxo46-202ENSMUST00000165913 2498 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Sf3b6P59708 Cfl1-202ENSMUST00000209469 2354 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Sf3b6P59708 Gatm-201ENSMUST00000028624 2389 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Sf3b6P59708 Luc7l3-201ENSMUST00000021226 3373 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
Sf3b6P59708 Gm15138-201ENSMUST00000151778 379 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
Sf3b6P59708 Ndufab1-ps-201ENSMUST00000166096 468 ntBASIC13.63□□□□□ -0.23
Sf3b6P59708 Smco4-202ENSMUST00000178999 820 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Sf3b6P59708 5830487J09Rik-201ENSMUST00000198600 1256 ntTSL 5 BASIC13.63□□□□□ -0.23
Sf3b6P59708 A430033K04Rik-204ENSMUST00000200521 1110 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
Sf3b6P59708 Gm45091-201ENSMUST00000205799 504 ntTSL 3 BASIC13.63□□□□□ -0.23
Sf3b6P59708 Rpl13a-204ENSMUST00000209711 495 ntTSL 3 BASIC13.63□□□□□ -0.23
Sf3b6P59708 Aga-203ENSMUST00000211424 1147 ntAPPRIS ALT2 TSL 1 (best) BASIC13.63□□□□□ -0.23
Sf3b6P59708 Gm40977-203ENSMUST00000222324 886 ntTSL 2 BASIC13.63□□□□□ -0.23
Sf3b6P59708 Hint2-201ENSMUST00000030192 610 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Sf3b6P59708 A430033K04Rik-201ENSMUST00000032590 1109 ntTSL 5 BASIC13.63□□□□□ -0.23
Sf3b6P59708 Atp5l-201ENSMUST00000043675 544 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Sf3b6P59708 Smco4-201ENSMUST00000045620 954 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Sf3b6P59708 Prss27-201ENSMUST00000059482 1253 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Sf3b6P59708 Ewsr1-204ENSMUST00000093365 1290 ntTSL 5 BASIC13.63□□□□□ -0.23
Sf3b6P59708 Ppt1-202ENSMUST00000097902 1191 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
Sf3b6P59708 Moxd1-201ENSMUST00000095784 3090 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Sf3b6P59708 Sgcd-201ENSMUST00000077221 1617 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Sf3b6P59708 Serinc1-201ENSMUST00000020027 2880 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Sf3b6P59708 Krt25-201ENSMUST00000038004 1989 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Sf3b6P59708 Gpsm1-203ENSMUST00000078616 3127 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
Sf3b6P59708 Ube2d1-201ENSMUST00000020085 1431 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Sf3b6P59708 Pbx3-201ENSMUST00000040638 2587 ntAPPRIS P3 TSL 1 (best) BASIC13.63□□□□□ -0.23
Sf3b6P59708 Cdc37l1-204ENSMUST00000224511 2944 ntAPPRIS ALT2 BASIC13.63□□□□□ -0.23
Sf3b6P59708 Nupl1-207ENSMUST00000225311 2475 ntBASIC13.63□□□□□ -0.23
Sf3b6P59708 Igfbp2-201ENSMUST00000047328 1307 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Sf3b6P59708 Spns1-202ENSMUST00000119754 2001 ntTSL 5 BASIC13.63□□□□□ -0.23
Sf3b6P59708 Gde1-201ENSMUST00000038791 1582 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Sf3b6P59708 Slc25a21-201ENSMUST00000044634 2609 ntAPPRIS P3 TSL 1 (best) BASIC13.62□□□□□ -0.23
Sf3b6P59708 Gm43951-201ENSMUST00000204457 2889 ntAPPRIS P1 BASIC13.62□□□□□ -0.23
Sf3b6P59708 Ttpa-202ENSMUST00000117632 3123 ntTSL 5 BASIC13.62□□□□□ -0.23
Sf3b6P59708 Dzip1-201ENSMUST00000004055 4079 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Sf3b6P59708 Gm26850-201ENSMUST00000181653 2669 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
Sf3b6P59708 Mtfr2-201ENSMUST00000169712 1991 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Sf3b6P59708 Ythdf3-203ENSMUST00000191774 3196 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
Sf3b6P59708 Gal3st1-203ENSMUST00000109981 1600 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Sf3b6P59708 Mafg-202ENSMUST00000106180 732 ntAPPRIS P1 TSL 2 BASIC13.62□□□□□ -0.23
Sf3b6P59708 Mafg-204ENSMUST00000106182 1104 ntAPPRIS P1 TSL 2 BASIC13.62□□□□□ -0.23
Sf3b6P59708 Trim3-205ENSMUST00000147044 2972 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Sf3b6P59708 Tcta-202ENSMUST00000192886 1094 ntAPPRIS P1 TSL 2 BASIC13.62□□□□□ -0.23
Sf3b6P59708 C530025M09Rik-201ENSMUST00000099264 690 ntAPPRIS P1 BASIC13.62□□□□□ -0.23
Sf3b6P59708 Rara-203ENSMUST00000107474 2380 ntAPPRIS P1 TSL 5 BASIC13.62□□□□□ -0.23
Sf3b6P59708 Llgl1-201ENSMUST00000052346 4303 ntAPPRIS P4 TSL 1 (best) BASIC13.62□□□□□ -0.23
Sf3b6P59708 Neurod2-201ENSMUST00000041685 3142 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Sf3b6P59708 Tmem184a-201ENSMUST00000044002 2039 ntAPPRIS ALT2 TSL 1 (best) BASIC13.62□□□□□ -0.23
Sf3b6P59708 Nab1-205ENSMUST00000186764 3640 ntAPPRIS ALT1 TSL 5 BASIC13.62□□□□□ -0.23
Sf3b6P59708 Kdm4b-202ENSMUST00000086835 4360 ntAPPRIS ALT2 TSL 5 BASIC13.62□□□□□ -0.23
Sf3b6P59708 8030474K03Rik-202ENSMUST00000151231 1940 ntAPPRIS P1 TSL 5 BASIC13.62□□□□□ -0.23
Sf3b6P59708 Rbfox3-201ENSMUST00000017576 3150 ntAPPRIS P4 TSL 1 (best) BASIC13.62□□□□□ -0.23
Sf3b6P59708 Stum-201ENSMUST00000136521 6506 ntAPPRIS P2 TSL 1 (best) BASIC13.62□□□□□ -0.23
Sf3b6P59708 Adal-201ENSMUST00000028702 2471 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
Sf3b6P59708 Acot6-201ENSMUST00000056822 3388 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Sf3b6P59708 Adam15-204ENSMUST00000107448 2893 ntAPPRIS ALT2 TSL 5 BASIC13.61□□□□□ -0.23
Sf3b6P59708 Galnt13-202ENSMUST00000112634 7639 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
Sf3b6P59708 Pqlc1-204ENSMUST00000129043 1864 ntAPPRIS ALT2 TSL 1 (best) BASIC13.61□□□□□ -0.23
Sf3b6P59708 Arhgap44-201ENSMUST00000047463 4074 ntAPPRIS P2 TSL 1 (best) BASIC13.61□□□□□ -0.23
Sf3b6P59708 Mrpl58-203ENSMUST00000106539 2522 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
Sf3b6P59708 Ism2-202ENSMUST00000125733 2526 ntAPPRIS P1 TSL 5 BASIC13.61□□□□□ -0.23
Sf3b6P59708 Bet1l-201ENSMUST00000026557 2268 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Sf3b6P59708 Lancl3-201ENSMUST00000069763 3991 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Sf3b6P59708 Strap-201ENSMUST00000064910 2650 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Sf3b6P59708 Gm7609-201ENSMUST00000113402 1538 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
Sf3b6P59708 Hist1h2bf-201ENSMUST00000105106 461 ntAPPRIS P1 BASIC13.61□□□□□ -0.23
Sf3b6P59708 Mzt2-202ENSMUST00000117136 758 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Retrieved 100 of 76,532 protein–RNA pairs in 34.7 ms