Protein–RNA interactions for Protein: P58749

Tm6sf1, Transmembrane 6 superfamily member 1, mousemouse

Predictions only

Length 370 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tm6sf1P58749 Tmem40-202ENSMUST00000112946 1554 ntAPPRIS ALT2 TSL 1 (best) BASIC18.79■□□□□ 0.6
Tm6sf1P58749 Kmt5b-213ENSMUST00000176262 3933 ntAPPRIS P3 TSL 5 BASIC18.79■□□□□ 0.6
Tm6sf1P58749 Phldb1-211ENSMUST00000135436 2844 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
Tm6sf1P58749 Rnf122-205ENSMUST00000217278 1726 ntAPPRIS ALT1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Tm6sf1P58749 Nfe2l2-201ENSMUST00000102672 2475 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Tm6sf1P58749 Synrg-201ENSMUST00000049714 3995 ntAPPRIS ALT2 TSL 5 BASIC18.79■□□□□ 0.6
Tm6sf1P58749 Nr1i3-203ENSMUST00000111328 1359 ntAPPRIS ALT2 TSL 1 (best) BASIC18.79■□□□□ 0.6
Tm6sf1P58749 Lancl1-203ENSMUST00000119559 1385 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Tm6sf1P58749 Tssc4-201ENSMUST00000060433 1519 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Tm6sf1P58749 Hdgfl1-201ENSMUST00000055915 1993 ntAPPRIS P1 BASIC18.79■□□□□ 0.6
Tm6sf1P58749 Unc93b1-203ENSMUST00000162708 2266 ntAPPRIS P3 TSL 1 (best) BASIC18.79■□□□□ 0.6
Tm6sf1P58749 Lmnb1-201ENSMUST00000025486 2843 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Tm6sf1P58749 Cep63-201ENSMUST00000093791 2696 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
Tm6sf1P58749 Tvp23b-201ENSMUST00000014321 1784 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Tm6sf1P58749 Paxbp1-202ENSMUST00000118522 3973 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Tm6sf1P58749 Sfxn4-203ENSMUST00000135808 1309 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Tm6sf1P58749 Dnase2a-201ENSMUST00000003910 1715 ntAPPRIS P2 TSL 1 (best) BASIC18.78■□□□□ 0.6
Tm6sf1P58749 Irgc1-201ENSMUST00000080594 1737 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Tm6sf1P58749 Gm13074-201ENSMUST00000124848 2735 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
Tm6sf1P58749 Dlgap4-204ENSMUST00000109566 1595 ntAPPRIS ALT2 TSL 1 (best) BASIC18.78■□□□□ 0.6
Tm6sf1P58749 Gm45799-202ENSMUST00000106786 409 ntAPPRIS ALT2 TSL 3 BASIC18.78■□□□□ 0.6
Tm6sf1P58749 Ptpa-208ENSMUST00000131476 989 ntTSL 2 BASIC18.78■□□□□ 0.6
Tm6sf1P58749 Gm15677-201ENSMUST00000152302 766 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
Tm6sf1P58749 Retsat-204ENSMUST00000176168 1203 ntTSL 5 BASIC18.78■□□□□ 0.6
Tm6sf1P58749 Rab10os-206ENSMUST00000179908 746 ntTSL 5 BASIC18.78■□□□□ 0.6
Tm6sf1P58749 Gm26695-201ENSMUST00000180920 1251 ntTSL 5 BASIC18.78■□□□□ 0.6
Tm6sf1P58749 Avpi1-201ENSMUST00000018965 1044 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Tm6sf1P58749 Rpl30-202ENSMUST00000079735 886 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Tm6sf1P58749 Chchd2-201ENSMUST00000094280 915 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Tm6sf1P58749 Ydjc-203ENSMUST00000115706 3097 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
Tm6sf1P58749 Stk40-201ENSMUST00000094761 3492 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Tm6sf1P58749 6430710C18Rik-203ENSMUST00000136807 1540 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
Tm6sf1P58749 Rhd-201ENSMUST00000030627 1514 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Tm6sf1P58749 Nrg2-203ENSMUST00000115713 3001 ntAPPRIS P1 TSL 5 BASIC18.78■□□□□ 0.6
Tm6sf1P58749 Robo3-202ENSMUST00000115038 4797 ntAPPRIS P2 TSL 5 BASIC18.78■□□□□ 0.6
Tm6sf1P58749 Hnrnpa2b1-201ENSMUST00000069949 1647 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
Tm6sf1P58749 Gm29361-201ENSMUST00000183323 2000 ntBASIC18.78■□□□□ 0.6
Tm6sf1P58749 Ugcg-201ENSMUST00000030074 4012 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Tm6sf1P58749 Kcnq5-203ENSMUST00000115300 6975 ntAPPRIS ALT2 TSL 1 (best) BASIC18.77■□□□□ 0.6
Tm6sf1P58749 Slc39a13-202ENSMUST00000079976 1884 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
Tm6sf1P58749 Htr7-202ENSMUST00000164639 3057 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Tm6sf1P58749 Col17a1-201ENSMUST00000026045 5588 ntAPPRIS ALT2 TSL 1 (best) BASIC18.77■□□□□ 0.6
Tm6sf1P58749 Hic2-202ENSMUST00000115698 2765 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
Tm6sf1P58749 Gnb2-212ENSMUST00000150063 1569 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Tm6sf1P58749 Sbno2-204ENSMUST00000217972 2462 ntTSL 2 BASIC18.77■□□□□ 0.6
Tm6sf1P58749 Pi4k2a-201ENSMUST00000066778 3771 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Tm6sf1P58749 Ppp2r1b-211ENSMUST00000176798 2074 ntAPPRIS ALT2 TSL 5 BASIC18.77■□□□□ 0.6
Tm6sf1P58749 Slc23a3-201ENSMUST00000027405 2059 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Tm6sf1P58749 Casp8-201ENSMUST00000027189 2585 ntAPPRIS P3 TSL 1 (best) BASIC18.77■□□□□ 0.6
Tm6sf1P58749 Mdk-204ENSMUST00000111309 771 ntAPPRIS P1 TSL 2 BASIC18.77■□□□□ 0.6
Tm6sf1P58749 Enkd1-201ENSMUST00000013299 1275 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Tm6sf1P58749 Plpp7-202ENSMUST00000140762 634 ntTSL 3 BASIC18.77■□□□□ 0.6
Tm6sf1P58749 1500015A07Rik-203ENSMUST00000184678 890 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
Tm6sf1P58749 Ino80dos-204ENSMUST00000188602 678 ntTSL 2 BASIC18.77■□□□□ 0.6
Tm6sf1P58749 1700017L05Rik-201ENSMUST00000201654 558 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
Tm6sf1P58749 Rpl19-ps10-201ENSMUST00000205555 330 ntBASIC18.77■□□□□ 0.6
Tm6sf1P58749 Olfr572-203ENSMUST00000215782 1233 ntAPPRIS P1 TSL 5 BASIC18.77■□□□□ 0.6
Tm6sf1P58749 AC164567.1-201ENSMUST00000219185 960 ntBASIC18.77■□□□□ 0.6
Tm6sf1P58749 Fam26f-201ENSMUST00000062784 1094 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Tm6sf1P58749 Lamp2-201ENSMUST00000016678 1769 ntAPPRIS ALT2 TSL 1 (best) BASIC18.77■□□□□ 0.6
Tm6sf1P58749 AC122901.1-201ENSMUST00000214203 1790 ntBASIC18.77■□□□□ 0.6
Tm6sf1P58749 B230217C12Rik-203ENSMUST00000164364 1859 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
Tm6sf1P58749 Zfp109-203ENSMUST00000206960 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC18.77■□□□□ 0.6
Tm6sf1P58749 Stap2-201ENSMUST00000043785 1491 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.59
Tm6sf1P58749 Btbd11-203ENSMUST00000105307 5788 ntAPPRIS P3 TSL 1 (best) BASIC18.77■□□□□ 0.59
Tm6sf1P58749 Mbnl1-201ENSMUST00000099087 5655 ntAPPRIS P2 TSL 1 (best) BASIC18.76■□□□□ 0.59
Tm6sf1P58749 Chn1-203ENSMUST00000112024 4050 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Tm6sf1P58749 Chn1-210ENSMUST00000180045 4050 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
Tm6sf1P58749 Cd5l-201ENSMUST00000015998 2036 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Tm6sf1P58749 Tmtc4-201ENSMUST00000037726 3416 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Tm6sf1P58749 Fbxl18-201ENSMUST00000035985 2831 ntAPPRIS P2 TSL 1 (best) BASIC18.76■□□□□ 0.59
Tm6sf1P58749 Myrf-202ENSMUST00000186056 3636 ntAPPRIS ALT2 TSL 1 (best) BASIC18.76■□□□□ 0.59
Tm6sf1P58749 Des-201ENSMUST00000027409 3028 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Tm6sf1P58749 Fam219b-201ENSMUST00000093833 3001 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
Tm6sf1P58749 Lyrm1-203ENSMUST00000106517 1279 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Tm6sf1P58749 Rpl36-ps8-201ENSMUST00000121187 315 ntBASIC18.76■□□□□ 0.59
Tm6sf1P58749 Gm1401-201ENSMUST00000122048 772 ntBASIC18.76■□□□□ 0.59
Tm6sf1P58749 Timm23-201ENSMUST00000013845 1173 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Tm6sf1P58749 Mcub-204ENSMUST00000153506 1005 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
Tm6sf1P58749 Gm16160-201ENSMUST00000160105 781 ntTSL 2 BASIC18.76■□□□□ 0.59
Tm6sf1P58749 Gm28577-201ENSMUST00000176106 741 ntTSL 5 BASIC18.76■□□□□ 0.59
Tm6sf1P58749 Gm31727-201ENSMUST00000210102 360 ntTSL 3 BASIC18.76■□□□□ 0.59
Tm6sf1P58749 Timm9-205ENSMUST00000221178 529 ntTSL 3 BASIC18.76■□□□□ 0.59
Tm6sf1P58749 Mef2d-201ENSMUST00000001455 5401 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
Tm6sf1P58749 Cep57-201ENSMUST00000034398 2523 ntAPPRIS P3 TSL 1 (best) BASIC18.76■□□□□ 0.59
Tm6sf1P58749 Arl6ip1-201ENSMUST00000032888 2171 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Tm6sf1P58749 Tmem57-201ENSMUST00000030628 3826 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Tm6sf1P58749 Lrwd1-201ENSMUST00000006301 2473 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Tm6sf1P58749 Miip-202ENSMUST00000119975 1879 ntAPPRIS ALT2 TSL 1 (best) BASIC18.75■□□□□ 0.59
Tm6sf1P58749 Otop3-201ENSMUST00000019006 2422 ntAPPRIS P3 TSL 2 BASIC18.75■□□□□ 0.59
Tm6sf1P58749 Fbxl7-201ENSMUST00000059204 4632 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Tm6sf1P58749 Srrm1-208ENSMUST00000136342 3152 ntAPPRIS P3 TSL 5 BASIC18.75■□□□□ 0.59
Tm6sf1P58749 AC174678.1-201ENSMUST00000228007 2749 ntBASIC18.75■□□□□ 0.59
Tm6sf1P58749 Coro1c-201ENSMUST00000004646 3491 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Tm6sf1P58749 Ephb4-201ENSMUST00000061244 4340 ntAPPRIS P3 TSL 1 (best) BASIC18.75■□□□□ 0.59
Tm6sf1P58749 Ankrd50-202ENSMUST00000120875 4945 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Tm6sf1P58749 Erdr1-202ENSMUST00000177671 708 ntAPPRIS ALT2 TSL 5 BASIC18.75■□□□□ 0.59
Tm6sf1P58749 4930519L02Rik-201ENSMUST00000197683 619 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
Tm6sf1P58749 Gm43767-201ENSMUST00000198933 381 ntBASIC18.75■□□□□ 0.59
Tm6sf1P58749 AC155714.1-201ENSMUST00000214033 956 ntTSL 5 BASIC18.75■□□□□ 0.59
Retrieved 100 of 76,532 protein–RNA pairs in 61.8 ms