Protein–RNA interactions for Protein: P55288

Cdh11, Cadherin-11, mousemouse

Predictions only

Length 796 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdh11P55288 Lonrf3-201ENSMUST00000016383 2911 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Cdh11P55288 Rgs9-202ENSMUST00000103062 1743 ntTSL 5 BASIC14.01□□□□□ -0.17
Cdh11P55288 Trappc12-203ENSMUST00000170994 2818 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Cdh11P55288 Fam178b-201ENSMUST00000114981 1659 ntAPPRIS P3 TSL 1 (best) BASIC14.01□□□□□ -0.17
Cdh11P55288 Hmga1b-201ENSMUST00000105046 1626 ntAPPRIS P1 BASIC14.01□□□□□ -0.17
Cdh11P55288 Ovca2-201ENSMUST00000071562 2670 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Cdh11P55288 Olah-202ENSMUST00000115087 1479 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Cdh11P55288 Abr-203ENSMUST00000094012 5236 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Cdh11P55288 Fam167a-201ENSMUST00000121288 4231 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Cdh11P55288 Rexo4-201ENSMUST00000064244 2281 ntAPPRIS ALT2 TSL 1 (best) BASIC14.01□□□□□ -0.17
Cdh11P55288 Gm7935-201ENSMUST00000100555 1278 ntBASIC14.01□□□□□ -0.17
Cdh11P55288 Rprl3-201ENSMUST00000157400 290 ntBASIC14.01□□□□□ -0.17
Cdh11P55288 Pym1-202ENSMUST00000163377 1158 ntAPPRIS P4 TSL 1 (best) BASIC14.01□□□□□ -0.17
Cdh11P55288 Ciao1-204ENSMUST00000174030 1109 ntTSL 5 BASIC14.01□□□□□ -0.17
Cdh11P55288 Gm28659-201ENSMUST00000188013 759 ntBASIC14.01□□□□□ -0.17
Cdh11P55288 AC133598.3-202ENSMUST00000224219 531 ntBASIC14.01□□□□□ -0.17
Cdh11P55288 Slc25a43-201ENSMUST00000047655 1111 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Cdh11P55288 Birc2-201ENSMUST00000054878 378 ntBASIC14.01□□□□□ -0.17
Cdh11P55288 Pla2g12b-201ENSMUST00000009790 1091 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Cdh11P55288 Olfr1272-201ENSMUST00000099750 927 ntAPPRIS P1 BASIC14.01□□□□□ -0.17
Cdh11P55288 Nap1l5-201ENSMUST00000059539 1844 ntAPPRIS P1 BASIC14.01□□□□□ -0.17
Cdh11P55288 Tpm1-215ENSMUST00000113705 1759 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Cdh11P55288 Csnk2a2-201ENSMUST00000056919 3773 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Cdh11P55288 Gm37305-201ENSMUST00000195714 4279 ntBASIC14.01□□□□□ -0.17
Cdh11P55288 Tada3-201ENSMUST00000032410 2848 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Cdh11P55288 Dok3-201ENSMUST00000047877 1546 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Cdh11P55288 Glis1-202ENSMUST00000106738 2744 ntAPPRIS ALT2 TSL 5 BASIC14□□□□□ -0.17
Cdh11P55288 Pitpnm1-202ENSMUST00000100022 4512 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Cdh11P55288 Cgnl1-203ENSMUST00000122065 4487 ntAPPRIS P2 TSL 1 (best) BASIC14□□□□□ -0.17
Cdh11P55288 Gm13283-201ENSMUST00000191112 1463 ntAPPRIS P1 BASIC14□□□□□ -0.17
Cdh11P55288 Gm26825-201ENSMUST00000181751 2026 ntTSL 5 BASIC14□□□□□ -0.17
Cdh11P55288 Zfp184-202ENSMUST00000102978 3198 ntAPPRIS P1 TSL 5 BASIC14□□□□□ -0.17
Cdh11P55288 Srrm1-208ENSMUST00000136342 3152 ntAPPRIS P3 TSL 5 BASIC14□□□□□ -0.17
Cdh11P55288 Fam208b-201ENSMUST00000096069 8338 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Cdh11P55288 Gm45351-201ENSMUST00000210683 2545 ntTSL 1 (best) BASIC14□□□□□ -0.17
Cdh11P55288 Ablim2-202ENSMUST00000101280 3042 ntTSL 5 BASIC14□□□□□ -0.17
Cdh11P55288 Ube2f-204ENSMUST00000178627 1363 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Cdh11P55288 Gadd45gip1-201ENSMUST00000036734 2494 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Cdh11P55288 Senp6-202ENSMUST00000164859 3853 ntAPPRIS ALT2 TSL 1 (best) BASIC14□□□□□ -0.17
Cdh11P55288 Btn1a1-202ENSMUST00000110434 1077 ntTSL 1 (best) BASIC14□□□□□ -0.17
Cdh11P55288 Gm13312-201ENSMUST00000119631 718 ntBASIC14□□□□□ -0.17
Cdh11P55288 Gm13830-201ENSMUST00000124378 417 ntTSL 1 (best) BASIC14□□□□□ -0.17
Cdh11P55288 AC153794.1-201ENSMUST00000169148 126 ntBASIC14□□□□□ -0.17
Cdh11P55288 Gm26644-201ENSMUST00000181365 958 ntTSL 1 (best) BASIC14□□□□□ -0.17
Cdh11P55288 Mir8098-201ENSMUST00000184011 137 ntBASIC14□□□□□ -0.17
Cdh11P55288 Gm29103-201ENSMUST00000191034 598 ntTSL 5 BASIC14□□□□□ -0.17
Cdh11P55288 Tecr-201ENSMUST00000019382 1158 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Cdh11P55288 Arhgap33-206ENSMUST00000208522 781 ntTSL 3 BASIC14□□□□□ -0.17
Cdh11P55288 Npw-202ENSMUST00000213213 531 ntAPPRIS P2 TSL 1 (best) BASIC14□□□□□ -0.17
Cdh11P55288 AC108846.1-201ENSMUST00000214531 513 ntBASIC14□□□□□ -0.17
Cdh11P55288 Borcs5-201ENSMUST00000062755 1764 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Cdh11P55288 Unc93b1-203ENSMUST00000162708 2266 ntAPPRIS P3 TSL 1 (best) BASIC14□□□□□ -0.17
Cdh11P55288 Myo9b-203ENSMUST00000170242 7297 ntAPPRIS ALT2 TSL 5 BASIC14□□□□□ -0.17
Cdh11P55288 Camk2d-204ENSMUST00000106400 2722 ntAPPRIS P3 TSL 1 (best) BASIC14□□□□□ -0.17
Cdh11P55288 P3h1-204ENSMUST00000121111 3188 ntAPPRIS ALT2 TSL 1 (best) BASIC14□□□□□ -0.17
Cdh11P55288 Traf2-202ENSMUST00000114234 2151 ntAPPRIS ALT2 TSL 5 BASIC14□□□□□ -0.17
Cdh11P55288 Rusc2-207ENSMUST00000131668 5093 ntTSL 5 BASIC14□□□□□ -0.17
Cdh11P55288 Cend1-201ENSMUST00000084436 1672 ntAPPRIS P1 TSL 5 BASIC14□□□□□ -0.17
Cdh11P55288 Gigyf1-201ENSMUST00000031727 5440 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Cdh11P55288 Rfx5-203ENSMUST00000107254 4450 ntTSL 1 (best) BASIC14□□□□□ -0.17
Cdh11P55288 AL691505.1-201ENSMUST00000219965 1618 ntTSL 5 BASIC14□□□□□ -0.17
Cdh11P55288 Kcnn1-208ENSMUST00000212611 2528 ntAPPRIS P2 TSL 1 (best) BASIC14□□□□□ -0.17
Cdh11P55288 Tubb4b-201ENSMUST00000043584 1598 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Cdh11P55288 Shd-201ENSMUST00000044216 1546 ntAPPRIS ALT2 TSL 1 (best) BASIC14□□□□□ -0.17
Cdh11P55288 Nup54-201ENSMUST00000038514 2352 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Cdh11P55288 Hnf4a-201ENSMUST00000018094 4356 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Cdh11P55288 Rnf138-201ENSMUST00000052396 3110 ntAPPRIS P1 TSL 5 BASIC13.99□□□□□ -0.17
Cdh11P55288 Syne3-201ENSMUST00000067005 5097 ntAPPRIS ALT2 TSL 1 (best) BASIC13.99□□□□□ -0.17
Cdh11P55288 Tmem116-204ENSMUST00000111795 2221 ntAPPRIS ALT2 TSL 1 (best) BASIC13.99□□□□□ -0.17
Cdh11P55288 Rtn4-201ENSMUST00000060992 1773 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Cdh11P55288 Ankrd10-202ENSMUST00000169782 5156 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
Cdh11P55288 Itgav-201ENSMUST00000028499 7054 ntAPPRIS P2 TSL 1 (best) BASIC13.99□□□□□ -0.17
Cdh11P55288 Fubp3-201ENSMUST00000055244 3648 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
Cdh11P55288 Trappc11-202ENSMUST00000120987 2060 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
Cdh11P55288 Tmem2-201ENSMUST00000025663 6585 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Cdh11P55288 Wt1-202ENSMUST00000111099 2441 ntTSL 5 BASIC13.99□□□□□ -0.17
Cdh11P55288 Smarca5-201ENSMUST00000043359 6113 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Cdh11P55288 Stxbp1-201ENSMUST00000050000 3892 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Cdh11P55288 0610009B22Rik-202ENSMUST00000109098 892 ntAPPRIS P1 TSL 3 BASIC13.99□□□□□ -0.17
Cdh11P55288 Syne4-208ENSMUST00000176304 1006 ntAPPRIS ALT2 TSL 5 BASIC13.99□□□□□ -0.17
Cdh11P55288 Senp1-204ENSMUST00000180657 3806 ntAPPRIS ALT2 TSL 1 (best) BASIC13.99□□□□□ -0.17
Cdh11P55288 Gm26871-202ENSMUST00000180774 695 ntTSL 2 BASIC13.99□□□□□ -0.17
Cdh11P55288 Gm27459-201ENSMUST00000184860 107 ntBASIC13.99□□□□□ -0.17
Cdh11P55288 1810010D01Rik-204ENSMUST00000208788 889 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Cdh11P55288 Tesc-201ENSMUST00000031304 1031 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Cdh11P55288 Jam2-201ENSMUST00000098407 1998 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
Cdh11P55288 Atl1-201ENSMUST00000021466 5150 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Cdh11P55288 Snx11-201ENSMUST00000021246 2551 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Cdh11P55288 Map6-203ENSMUST00000122101 3233 ntAPPRIS ALT2 TSL 1 (best) BASIC13.99□□□□□ -0.17
Cdh11P55288 Dhodh-209ENSMUST00000143900 1455 ntTSL 5 BASIC13.99□□□□□ -0.17
Cdh11P55288 Runx2-213ENSMUST00000162878 2987 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
Cdh11P55288 D1Pas1-201ENSMUST00000045108 3212 ntAPPRIS P1 BASIC13.98□□□□□ -0.17
Cdh11P55288 Nrcam-202ENSMUST00000110748 6275 ntAPPRIS ALT2 TSL 1 (best) BASIC13.98□□□□□ -0.17
Cdh11P55288 Arrdc1-201ENSMUST00000028349 1666 ntAPPRIS ALT2 TSL 1 (best) BASIC13.98□□□□□ -0.17
Cdh11P55288 Ccnj-203ENSMUST00000120057 3783 ntTSL 5 BASIC13.98□□□□□ -0.17
Cdh11P55288 Hcfc2-201ENSMUST00000020478 3422 ntAPPRIS P1 TSL 5 BASIC13.98□□□□□ -0.17
Cdh11P55288 6030419C18Rik-202ENSMUST00000216294 1601 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Cdh11P55288 Foxg1-204ENSMUST00000179669 3973 ntAPPRIS P1 BASIC13.98□□□□□ -0.17
Cdh11P55288 Rnf38-202ENSMUST00000098098 5061 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
Cdh11P55288 4930512B01Rik-201ENSMUST00000021378 1856 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
Retrieved 100 of 76,532 protein–RNA pairs in 40.6 ms