Protein–RNA interactions for Protein: P55096

Abcd3, ATP-binding cassette sub-family D member 3, mousemouse

Predictions only

Length 659 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Abcd3P55096 Zfp109-203ENSMUST00000206960 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC13.74□□□□□ -0.21
Abcd3P55096 D530014G21Rik-201ENSMUST00000208416 587 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
Abcd3P55096 Gm38575-201ENSMUST00000213881 652 ntTSL 2 BASIC13.74□□□□□ -0.21
Abcd3P55096 Tomm22-201ENSMUST00000023062 1031 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Abcd3P55096 Gpr142-201ENSMUST00000045319 1098 ntAPPRIS P3 TSL 1 (best) BASIC13.74□□□□□ -0.21
Abcd3P55096 Gpr3-202ENSMUST00000105911 2518 ntAPPRIS P1 BASIC13.74□□□□□ -0.21
Abcd3P55096 Zfp423-202ENSMUST00000109655 4907 ntAPPRIS P2 TSL 1 (best) BASIC13.74□□□□□ -0.21
Abcd3P55096 Rhot1-203ENSMUST00000077451 3297 ntAPPRIS ALT2 TSL 5 BASIC13.74□□□□□ -0.21
Abcd3P55096 Tfap2c-201ENSMUST00000030391 2838 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Abcd3P55096 Ctnna2-205ENSMUST00000161846 4018 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
Abcd3P55096 Fgf9-201ENSMUST00000022545 1593 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Abcd3P55096 Tsc22d2-201ENSMUST00000099090 9799 ntAPPRIS P3 TSL 3 BASIC13.74□□□□□ -0.21
Abcd3P55096 Hdhd2-203ENSMUST00000097522 2318 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Abcd3P55096 Cnot11-203ENSMUST00000161515 3482 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Abcd3P55096 Nkain2-203ENSMUST00000191234 3760 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Abcd3P55096 Arsi-201ENSMUST00000040359 2975 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Abcd3P55096 Zfp202-203ENSMUST00000168832 3329 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
Abcd3P55096 Mindy1-212ENSMUST00000168223 1812 ntTSL 5 BASIC13.74□□□□□ -0.21
Abcd3P55096 Grin3b-201ENSMUST00000045085 3283 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Abcd3P55096 Fam78b-206ENSMUST00000190081 4666 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Abcd3P55096 Nov-201ENSMUST00000050027 2869 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Abcd3P55096 Esco1-203ENSMUST00000115864 2148 ntAPPRIS ALT2 TSL 1 (best) BASIC13.73□□□□□ -0.21
Abcd3P55096 Mri1-203ENSMUST00000126435 2819 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Abcd3P55096 B3galt6-201ENSMUST00000052185 3184 ntAPPRIS P1 BASIC13.73□□□□□ -0.21
Abcd3P55096 Ntng2-203ENSMUST00000091153 1695 ntAPPRIS ALT2 TSL 1 (best) BASIC13.73□□□□□ -0.21
Abcd3P55096 Plcxd1-201ENSMUST00000086687 1346 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Abcd3P55096 Slc43a3-201ENSMUST00000090726 2583 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Abcd3P55096 Oraov1-203ENSMUST00000105895 1016 ntAPPRIS ALT2 TSL 2 BASIC13.73□□□□□ -0.21
Abcd3P55096 Pih1d1-202ENSMUST00000107811 1072 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Abcd3P55096 Gm16194-203ENSMUST00000141239 362 ntTSL 3 BASIC13.73□□□□□ -0.21
Abcd3P55096 Nabp2-204ENSMUST00000166608 979 ntTSL 5 BASIC13.73□□□□□ -0.21
Abcd3P55096 AC153527.1-201ENSMUST00000220412 602 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
Abcd3P55096 AC159301.1-201ENSMUST00000225130 1182 ntBASIC13.73□□□□□ -0.21
Abcd3P55096 Zfp706-204ENSMUST00000226671 447 ntAPPRIS P1 BASIC13.73□□□□□ -0.21
Abcd3P55096 Magohb-201ENSMUST00000032307 767 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Abcd3P55096 Ifi27-204ENSMUST00000079294 963 ntAPPRIS ALT2 TSL 1 (best) BASIC13.73□□□□□ -0.21
Abcd3P55096 Steap2-205ENSMUST00000115427 3470 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
Abcd3P55096 Arhgef18-201ENSMUST00000004684 5271 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Abcd3P55096 Rrp8-201ENSMUST00000033179 3053 ntAPPRIS P3 TSL 1 (best) BASIC13.73□□□□□ -0.21
Abcd3P55096 Lypd1-205ENSMUST00000162899 1511 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
Abcd3P55096 Dnajc1-209ENSMUST00000166495 5497 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Abcd3P55096 Cct7-201ENSMUST00000032078 2441 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Abcd3P55096 Tnfaip8l1-201ENSMUST00000077788 2379 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Abcd3P55096 Tmpo-201ENSMUST00000020123 3772 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Abcd3P55096 Ppef2-201ENSMUST00000031359 2274 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Abcd3P55096 Chst8-204ENSMUST00000205259 1980 ntAPPRIS P1 TSL 5 BASIC13.72□□□□□ -0.21
Abcd3P55096 Vgll3-201ENSMUST00000168064 7009 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Abcd3P55096 Fam83g-202ENSMUST00000093019 4778 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Abcd3P55096 Rtn1-202ENSMUST00000078505 3629 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
Abcd3P55096 Lhx3-202ENSMUST00000054099 2184 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
Abcd3P55096 Camsap1-202ENSMUST00000114167 7981 ntAPPRIS P2 TSL 5 BASIC13.72□□□□□ -0.21
Abcd3P55096 Camsap1-201ENSMUST00000091268 7978 ntAPPRIS ALT2 TSL 5 BASIC13.72□□□□□ -0.21
Abcd3P55096 Foxg1-204ENSMUST00000179669 3973 ntAPPRIS P1 BASIC13.72□□□□□ -0.21
Abcd3P55096 A230087F16Rik-202ENSMUST00000181561 1303 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
Abcd3P55096 Nhlh2-202ENSMUST00000196324 2647 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Abcd3P55096 2510009E07Rik-201ENSMUST00000053336 5164 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Abcd3P55096 Smoc2-201ENSMUST00000024660 2832 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Abcd3P55096 4933405L10Rik-201ENSMUST00000013302 1214 ntAPPRIS P2 TSL 1 (best) BASIC13.72□□□□□ -0.21
Abcd3P55096 Gm15655-201ENSMUST00000134649 440 ntTSL 2 BASIC13.72□□□□□ -0.21
Abcd3P55096 Edf1-201ENSMUST00000015236 722 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Abcd3P55096 Gm21887-203ENSMUST00000180251 531 ntAPPRIS P5 TSL 5 BASIC13.72□□□□□ -0.21
Abcd3P55096 Gm44357-201ENSMUST00000195897 142 ntBASIC13.72□□□□□ -0.21
Abcd3P55096 Gm19658-201ENSMUST00000196231 138 ntBASIC13.72□□□□□ -0.21
Abcd3P55096 Gm44367-201ENSMUST00000196836 138 ntBASIC13.72□□□□□ -0.21
Abcd3P55096 Gm44350-201ENSMUST00000197197 138 ntBASIC13.72□□□□□ -0.21
Abcd3P55096 Gm44390-201ENSMUST00000197533 144 ntBASIC13.72□□□□□ -0.21
Abcd3P55096 Gm44313-201ENSMUST00000198018 138 ntBASIC13.72□□□□□ -0.21
Abcd3P55096 Gm44486-201ENSMUST00000198508 138 ntBASIC13.72□□□□□ -0.21
Abcd3P55096 Gm44314-201ENSMUST00000199263 138 ntBASIC13.72□□□□□ -0.21
Abcd3P55096 Gm44394-201ENSMUST00000199558 138 ntBASIC13.72□□□□□ -0.21
Abcd3P55096 Gm44484-201ENSMUST00000199873 138 ntBASIC13.72□□□□□ -0.21
Abcd3P55096 Gm44466-201ENSMUST00000200264 138 ntBASIC13.72□□□□□ -0.21
Abcd3P55096 Stard3nl-208ENSMUST00000200323 1128 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
Abcd3P55096 Gm44359-201ENSMUST00000200671 138 ntBASIC13.72□□□□□ -0.21
Abcd3P55096 Dcdc2c-201ENSMUST00000020963 1041 ntTSL 5 BASIC13.72□□□□□ -0.21
Abcd3P55096 Csrp2-207ENSMUST00000220409 780 ntTSL 2 BASIC13.72□□□□□ -0.21
Abcd3P55096 Pdcd6-201ENSMUST00000022060 1131 ntAPPRIS P2 TSL 1 (best) BASIC13.72□□□□□ -0.21
Abcd3P55096 Gm6296-201ENSMUST00000222599 943 ntBASIC13.72□□□□□ -0.21
Abcd3P55096 Zfp385a-201ENSMUST00000168828 2291 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Abcd3P55096 Prrt2-201ENSMUST00000159916 2501 ntAPPRIS P1 TSL 5 BASIC13.72□□□□□ -0.21
Abcd3P55096 Fgfr1op2-203ENSMUST00000067404 2766 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Abcd3P55096 Trim3-201ENSMUST00000057525 3016 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Abcd3P55096 Zfp395-201ENSMUST00000066994 4229 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Abcd3P55096 Arhgef1-201ENSMUST00000047873 3212 ntAPPRIS ALT2 TSL 1 (best) BASIC13.72□□□□□ -0.21
Abcd3P55096 Dnajc2-203ENSMUST00000115193 2416 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
Abcd3P55096 Gm10564-201ENSMUST00000097750 3113 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
Abcd3P55096 Hoga1-201ENSMUST00000081714 1668 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Abcd3P55096 Ubash3b-201ENSMUST00000044155 6354 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Abcd3P55096 Rab10-201ENSMUST00000021001 3513 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Abcd3P55096 Rassf3-201ENSMUST00000026902 3522 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Abcd3P55096 1700066M21Rik-201ENSMUST00000042734 3008 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Abcd3P55096 E430024P14Rik-202ENSMUST00000160177 2050 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
Abcd3P55096 Ntng1-203ENSMUST00000106570 1386 ntTSL 5 BASIC13.71□□□□□ -0.21
Abcd3P55096 Galnt6os-201ENSMUST00000160960 1389 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
Abcd3P55096 Snupn-201ENSMUST00000068856 1391 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Abcd3P55096 Oas1b-203ENSMUST00000183291 1837 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Abcd3P55096 Mcfd2-201ENSMUST00000024963 1823 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Abcd3P55096 Bbs10-201ENSMUST00000040454 2744 ntAPPRIS P1 TSL 2 BASIC13.71□□□□□ -0.21
Abcd3P55096 Magi1-202ENSMUST00000089317 7209 ntAPPRIS P3 TSL 1 (best) BASIC13.71□□□□□ -0.21
Abcd3P55096 Pld2-202ENSMUST00000108556 3391 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
Retrieved 100 of 76,532 protein–RNA pairs in 51.6 ms