Protein–RNA interactions for Protein: P54846

Nrl, Neural retina-specific leucine zipper protein, mousemouse

Predictions only

Length 237 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NrlP54846 Brsk2-202ENSMUST00000075528 2160 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
NrlP54846 Met-203ENSMUST00000115443 6809 ntAPPRIS P1 TSL 5 BASIC16.33■□□□□ 0.2
NrlP54846 Stxbp6-201ENSMUST00000053768 4553 ntAPPRIS P1 TSL 5 BASIC16.33■□□□□ 0.2
NrlP54846 Ube2r2-201ENSMUST00000040008 3600 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
NrlP54846 Large2-201ENSMUST00000068586 2445 ntAPPRIS P3 TSL 1 (best) BASIC16.33■□□□□ 0.2
NrlP54846 Hist1h4k-201ENSMUST00000102983 312 ntAPPRIS P1 BASIC16.33■□□□□ 0.2
NrlP54846 Gm6226-201ENSMUST00000117765 1146 ntBASIC16.33■□□□□ 0.2
NrlP54846 Ntpcr-205ENSMUST00000143504 520 ntTSL 5 BASIC16.33■□□□□ 0.2
NrlP54846 A530058N18Rik-205ENSMUST00000143993 550 ntTSL 3 BASIC16.33■□□□□ 0.2
NrlP54846 4930556N13Rik-201ENSMUST00000173677 1034 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
NrlP54846 1190007I07Rik-204ENSMUST00000183416 637 ntTSL 2 BASIC16.33■□□□□ 0.2
NrlP54846 Gm44335-201ENSMUST00000196879 141 ntBASIC16.33■□□□□ 0.2
NrlP54846 Cldn25-ps-201ENSMUST00000197641 693 ntBASIC16.33■□□□□ 0.2
NrlP54846 Gm44297-201ENSMUST00000198304 141 ntBASIC16.33■□□□□ 0.2
NrlP54846 Gm44346-201ENSMUST00000198851 141 ntBASIC16.33■□□□□ 0.2
NrlP54846 Rgs10-201ENSMUST00000033133 880 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
NrlP54846 Stk33-203ENSMUST00000121378 1304 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
NrlP54846 4933434E20Rik-204ENSMUST00000159064 1344 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
NrlP54846 Otp-201ENSMUST00000022195 2656 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
NrlP54846 Gm13332-201ENSMUST00000120451 1398 ntBASIC16.33■□□□□ 0.2
NrlP54846 Zdhhc15-201ENSMUST00000042070 5509 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
NrlP54846 Bard1-201ENSMUST00000027393 5659 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
NrlP54846 Snn-201ENSMUST00000089011 2902 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
NrlP54846 Ntng2-210ENSMUST00000177689 1679 ntAPPRIS ALT2 TSL 5 BASIC16.33■□□□□ 0.2
NrlP54846 Gclc-201ENSMUST00000034905 3423 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
NrlP54846 Dancr-204ENSMUST00000132389 2347 ntBASIC16.33■□□□□ 0.2
NrlP54846 Ccdc43-201ENSMUST00000092569 2366 ntAPPRIS P2 TSL 1 (best) BASIC16.33■□□□□ 0.2
NrlP54846 Gch1-201ENSMUST00000089959 2775 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
NrlP54846 App-207ENSMUST00000227737 2827 ntBASIC16.32■□□□□ 0.2
NrlP54846 Nrxn1-216ENSMUST00000174331 6282 ntAPPRIS ALT1 TSL 5 BASIC16.32■□□□□ 0.2
NrlP54846 Tnnc2-201ENSMUST00000103095 700 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
NrlP54846 Rapgef6-205ENSMUST00000108895 1829 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
NrlP54846 Wnt5b-202ENSMUST00000118120 2115 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
NrlP54846 H2-Bl-209ENSMUST00000194244 862 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
NrlP54846 Adipor1-201ENSMUST00000027727 3123 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
NrlP54846 Hmgcl-201ENSMUST00000030432 1418 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
NrlP54846 Psmb10-201ENSMUST00000034369 1311 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
NrlP54846 Lmna-202ENSMUST00000036252 1536 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
NrlP54846 Plcl1-201ENSMUST00000042986 6580 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
NrlP54846 Crebl2-201ENSMUST00000046303 3629 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
NrlP54846 Mapk8ip1-201ENSMUST00000050312 2930 ntAPPRIS P3 TSL 1 (best) BASIC16.32■□□□□ 0.2
NrlP54846 Prss54-201ENSMUST00000052690 1438 ntAPPRIS ALT2 TSL 1 (best) BASIC16.32■□□□□ 0.2
NrlP54846 Olfr370-201ENSMUST00000058609 1096 ntAPPRIS P1 BASIC16.32■□□□□ 0.2
NrlP54846 Gm9789-201ENSMUST00000062524 397 ntAPPRIS P1 BASIC16.32■□□□□ 0.2
NrlP54846 Klk15-201ENSMUST00000068625 845 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
NrlP54846 Hnrnph1-202ENSMUST00000077817 2126 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
NrlP54846 Gm128-201ENSMUST00000090815 1959 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
NrlP54846 Mapk8ip3-201ENSMUST00000088345 5543 ntAPPRIS P3 TSL 1 (best) BASIC16.32■□□□□ 0.2
NrlP54846 Map3k6-201ENSMUST00000030677 4334 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
NrlP54846 Wipi1-201ENSMUST00000047186 3338 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
NrlP54846 Cactin-201ENSMUST00000050867 2715 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
NrlP54846 Pigs-201ENSMUST00000048073 2501 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
NrlP54846 Plekha4-207ENSMUST00000211227 2133 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
NrlP54846 Chst14-202ENSMUST00000110837 1991 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
NrlP54846 Pitpna-206ENSMUST00000179521 3727 ntAPPRIS ALT1 TSL 5 BASIC16.31■□□□□ 0.2
NrlP54846 Gm45723-201ENSMUST00000212135 1783 ntTSL 5 BASIC16.31■□□□□ 0.2
NrlP54846 Mbd6-201ENSMUST00000026476 4165 ntAPPRIS P3 TSL 5 BASIC16.31■□□□□ 0.2
NrlP54846 Grk6-207ENSMUST00000225925 2769 ntBASIC16.31■□□□□ 0.2
NrlP54846 Tmed1-201ENSMUST00000034698 1378 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
NrlP54846 Styxl1-204ENSMUST00000111163 1276 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
NrlP54846 Acvr1c-203ENSMUST00000112607 1266 ntTSL 5 BASIC16.31■□□□□ 0.2
NrlP54846 Trem2-202ENSMUST00000113237 1056 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
NrlP54846 Hagh-202ENSMUST00000118788 1191 ntAPPRIS P3 TSL 1 (best) BASIC16.31■□□□□ 0.2
NrlP54846 Hoxb8-203ENSMUST00000168043 1141 ntAPPRIS P1 TSL 5 BASIC16.31■□□□□ 0.2
NrlP54846 Cyb561d2-205ENSMUST00000195235 1162 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
NrlP54846 Thap2-203ENSMUST00000218989 527 ntBASIC16.31■□□□□ 0.2
NrlP54846 Mrpl20-201ENSMUST00000030942 764 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
NrlP54846 Lce1f-201ENSMUST00000047153 728 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
NrlP54846 Rnaseh2a-201ENSMUST00000065049 1006 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
NrlP54846 Sox1ot-201ENSMUST00000080795 5064 ntTSL 5 BASIC16.31■□□□□ 0.2
NrlP54846 Fem1b-201ENSMUST00000034775 6785 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
NrlP54846 Arfgap2-202ENSMUST00000080008 3068 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
NrlP54846 Matn1-201ENSMUST00000102576 2001 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
NrlP54846 Ate1-203ENSMUST00000094017 1938 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
NrlP54846 Ppp1r37-201ENSMUST00000058444 3816 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
NrlP54846 Cbl-204ENSMUST00000205968 2809 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
NrlP54846 Ttc39b-202ENSMUST00000048274 1804 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
NrlP54846 Lrrc42-201ENSMUST00000030360 1755 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
NrlP54846 Tlnrd1-201ENSMUST00000094216 4433 ntAPPRIS P1 BASIC16.31■□□□□ 0.2
NrlP54846 Gm4756-201ENSMUST00000207585 1716 ntTSL 5 BASIC16.31■□□□□ 0.2
NrlP54846 Letmd1-201ENSMUST00000037001 2579 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
NrlP54846 Pde4d-207ENSMUST00000120664 4207 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
NrlP54846 Atp6v0d1-201ENSMUST00000013304 1629 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
NrlP54846 Twf2-201ENSMUST00000024047 1596 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
NrlP54846 Zfp36l3-201ENSMUST00000071711 2347 ntAPPRIS P1 BASIC16.3■□□□□ 0.2
NrlP54846 Lrr1-201ENSMUST00000110621 1500 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
NrlP54846 Rgl1-201ENSMUST00000027760 4572 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
NrlP54846 Sema6b-201ENSMUST00000001256 3736 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
NrlP54846 Nkpd1-202ENSMUST00000207576 2916 ntAPPRIS P2 TSL 5 BASIC16.3■□□□□ 0.2
NrlP54846 Dars-201ENSMUST00000027602 2175 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
NrlP54846 Susd3-202ENSMUST00000058196 1418 ntAPPRIS P3 TSL 1 (best) BASIC16.3■□□□□ 0.2
NrlP54846 Mob2-206ENSMUST00000211206 2140 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
NrlP54846 Nfkbid-201ENSMUST00000046177 2039 ntAPPRIS P2 TSL 1 (best) BASIC16.3■□□□□ 0.2
NrlP54846 Znfx1-201ENSMUST00000048988 7218 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
NrlP54846 Med15-202ENSMUST00000080936 3263 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
NrlP54846 Gm3252-201ENSMUST00000165619 1949 ntAPPRIS P1 TSL 5 BASIC16.3■□□□□ 0.2
NrlP54846 Ofd1-201ENSMUST00000049501 4453 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
NrlP54846 Atf7ip2-202ENSMUST00000100191 889 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
NrlP54846 Atf7ip2-203ENSMUST00000117220 1230 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
NrlP54846 Haghl-206ENSMUST00000138759 1074 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
Retrieved 100 of 76,532 protein–RNA pairs in 21.5 ms