Protein–RNA interactions for Protein: P54276

Msh6, DNA mismatch repair protein Msh6, mousemouse

Known RBP Predictions only

Length 1,358 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Msh6P54276 Iqcb1-201ENSMUST00000023535 2257 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Msh6P54276 Nrg1-218ENSMUST00000209107 2972 ntAPPRIS ALT2 TSL 5 BASIC19.37■□□□□ 0.69
Msh6P54276 Scrib-201ENSMUST00000002603 5599 ntAPPRIS P3 TSL 1 (best) BASIC19.36■□□□□ 0.69
Msh6P54276 Wnt4-201ENSMUST00000045747 4194 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Msh6P54276 Coq6-203ENSMUST00000110278 1354 ntAPPRIS ALT2 TSL 5 BASIC19.36■□□□□ 0.69
Msh6P54276 Insig1-201ENSMUST00000059155 2697 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Msh6P54276 Rfc3-201ENSMUST00000038131 1317 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Msh6P54276 Otol1-201ENSMUST00000053013 2161 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Msh6P54276 Khdc3-202ENSMUST00000167514 1251 ntAPPRIS ALT2 TSL 5 BASIC19.36■□□□□ 0.69
Msh6P54276 Gm37277-201ENSMUST00000194052 1111 ntBASIC19.36■□□□□ 0.69
Msh6P54276 Zfand6-208ENSMUST00000209117 2955 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Msh6P54276 Gm34030-202ENSMUST00000211434 1126 ntTSL 5 BASIC19.36■□□□□ 0.69
Msh6P54276 Tpi-rs5-201ENSMUST00000216947 774 ntBASIC19.36■□□□□ 0.69
Msh6P54276 AC166341.4-201ENSMUST00000220625 123 ntBASIC19.36■□□□□ 0.69
Msh6P54276 Zfp764-201ENSMUST00000059199 2508 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Msh6P54276 Cmtm1-202ENSMUST00000160596 1900 ntAPPRIS ALT2 TSL 5 BASIC19.36■□□□□ 0.69
Msh6P54276 Aarsd1-201ENSMUST00000070395 1516 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Msh6P54276 Zxdc-203ENSMUST00000113539 4864 ntAPPRIS ALT2 TSL 1 (best) BASIC19.36■□□□□ 0.69
Msh6P54276 Phtf1-202ENSMUST00000063717 3327 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Msh6P54276 Nap1l5-201ENSMUST00000059539 1844 ntAPPRIS P1 BASIC19.36■□□□□ 0.69
Msh6P54276 Ubr5-201ENSMUST00000110336 9242 ntTSL 5 BASIC19.36■□□□□ 0.69
Msh6P54276 Osr2-201ENSMUST00000022952 1724 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
Msh6P54276 Card9-202ENSMUST00000100303 1947 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Msh6P54276 Tex22-202ENSMUST00000109729 735 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Msh6P54276 Rpl34-ps1-201ENSMUST00000121998 354 ntBASIC19.35■□□□□ 0.69
Msh6P54276 Gm27306-201ENSMUST00000183970 107 ntBASIC19.35■□□□□ 0.69
Msh6P54276 Irs3-202ENSMUST00000196511 1281 ntAPPRIS ALT2 TSL 1 (best) BASIC19.35■□□□□ 0.69
Msh6P54276 Gzma-201ENSMUST00000023897 878 ntAPPRIS P2 TSL 1 (best) BASIC19.35■□□□□ 0.69
Msh6P54276 Rpl34-ps2-201ENSMUST00000081679 354 ntBASIC19.35■□□□□ 0.69
Msh6P54276 Gm10154-201ENSMUST00000084445 354 ntBASIC19.35■□□□□ 0.69
Msh6P54276 AC133083.1-201ENSMUST00000221736 2209 ntBASIC19.35■□□□□ 0.69
Msh6P54276 Camta1-204ENSMUST00000105670 4961 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
Msh6P54276 Pxk-205ENSMUST00000225653 2765 ntAPPRIS P2 BASIC19.35■□□□□ 0.69
Msh6P54276 Ccnb2-201ENSMUST00000034742 1531 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Msh6P54276 Disc1-205ENSMUST00000117658 2671 ntAPPRIS P3 TSL 1 (best) BASIC19.35■□□□□ 0.69
Msh6P54276 Itsn2-215ENSMUST00000220311 6080 ntAPPRIS ALT2 TSL 1 (best) BASIC19.35■□□□□ 0.69
Msh6P54276 Dnase2a-201ENSMUST00000003910 1715 ntAPPRIS P2 TSL 1 (best) BASIC19.35■□□□□ 0.69
Msh6P54276 Chst3-202ENSMUST00000135158 6108 ntAPPRIS P2 TSL 5 BASIC19.35■□□□□ 0.69
Msh6P54276 Ubap1l-201ENSMUST00000147185 1380 ntAPPRIS P1 TSL 5 BASIC19.35■□□□□ 0.69
Msh6P54276 Gstm7-201ENSMUST00000004137 1377 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Msh6P54276 Slit3-201ENSMUST00000069837 5228 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Msh6P54276 Bcs1l-201ENSMUST00000027358 1890 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Msh6P54276 Spg21-201ENSMUST00000034955 2680 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Msh6P54276 Gm26917-202ENSMUST00000192833 3329 ntBASIC19.34■□□□□ 0.69
Msh6P54276 Wdyhv1-203ENSMUST00000226889 394 ntBASIC19.34■□□□□ 0.69
Msh6P54276 Eef1akmt2-201ENSMUST00000033257 1107 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Msh6P54276 Pus1-207ENSMUST00000170468 1510 ntAPPRIS ALT2 TSL 5 BASIC19.34■□□□□ 0.69
Msh6P54276 Zgpat-201ENSMUST00000029105 2293 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Msh6P54276 Arhgef17-204ENSMUST00000209041 4516 ntAPPRIS ALT2 TSL 1 (best) BASIC19.34■□□□□ 0.69
Msh6P54276 Rimbp3-201ENSMUST00000169803 5787 ntAPPRIS P1 BASIC19.34■□□□□ 0.69
Msh6P54276 Prkag2-203ENSMUST00000114975 2205 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Msh6P54276 Acin1-224ENSMUST00000167015 1746 ntAPPRIS ALT2 TSL 1 (best) BASIC19.34■□□□□ 0.69
Msh6P54276 Sept4-201ENSMUST00000018544 1726 ntAPPRIS P2 TSL 1 (best) BASIC19.34■□□□□ 0.69
Msh6P54276 Irgc1-201ENSMUST00000080594 1737 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Msh6P54276 Nt5dc2-201ENSMUST00000090212 1407 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
Msh6P54276 Tmem150b-202ENSMUST00000086364 2822 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
Msh6P54276 Tcea1-202ENSMUST00000165720 2854 ntTSL 5 BASIC19.34■□□□□ 0.69
Msh6P54276 Lhx3-202ENSMUST00000054099 2184 ntTSL 1 (best) BASIC19.33■□□□□ 0.69
Msh6P54276 Trim28-201ENSMUST00000005705 3245 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
Msh6P54276 Park7-204ENSMUST00000105675 882 ntAPPRIS P1 TSL 5 BASIC19.33■□□□□ 0.69
Msh6P54276 Gm6973-201ENSMUST00000117080 721 ntBASIC19.33■□□□□ 0.69
Msh6P54276 Vsig2-204ENSMUST00000215271 891 ntTSL 1 (best) BASIC19.33■□□□□ 0.69
Msh6P54276 Ifng-201ENSMUST00000068592 1208 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
Msh6P54276 G0s2-201ENSMUST00000009777 871 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
Msh6P54276 Gal3st4-202ENSMUST00000161279 2059 ntAPPRIS P3 TSL 3 BASIC19.33■□□□□ 0.69
Msh6P54276 Hist1h2ac-201ENSMUST00000171127 2482 ntAPPRIS P1 BASIC19.33■□□□□ 0.69
Msh6P54276 Fgf13-201ENSMUST00000033473 2499 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
Msh6P54276 Myrip-201ENSMUST00000048121 4906 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
Msh6P54276 Atp6v1c2-208ENSMUST00000221129 1425 ntAPPRIS P1 TSL 5 BASIC19.33■□□□□ 0.69
Msh6P54276 Pdpk1-201ENSMUST00000052462 1832 ntAPPRIS ALT2 TSL 1 (best) BASIC19.33■□□□□ 0.69
Msh6P54276 Apmap-201ENSMUST00000046399 2235 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
Msh6P54276 Sebox-201ENSMUST00000001130 1351 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
Msh6P54276 Pqbp1-202ENSMUST00000115654 1374 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
Msh6P54276 Stx7-201ENSMUST00000020174 2502 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
Msh6P54276 4930431F12Rik-202ENSMUST00000199309 2263 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
Msh6P54276 Golga5-201ENSMUST00000021609 3390 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
Msh6P54276 Stap2-201ENSMUST00000043785 1491 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
Msh6P54276 Gm3054-201ENSMUST00000111075 265 ntTSL 5 BASIC19.32■□□□□ 0.68
Msh6P54276 Lcn6-202ENSMUST00000114197 635 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
Msh6P54276 Dph3-205ENSMUST00000124303 809 ntTSL 2 BASIC19.32■□□□□ 0.68
Msh6P54276 Gm15458-201ENSMUST00000156950 709 ntTSL 5 BASIC19.32■□□□□ 0.68
Msh6P54276 Gm27618-201ENSMUST00000183671 60 ntBASIC19.32■□□□□ 0.68
Msh6P54276 Cartpt-201ENSMUST00000022150 827 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
Msh6P54276 Cartpt-202ENSMUST00000224142 1238 ntAPPRIS P1 BASIC19.32■□□□□ 0.68
Msh6P54276 Clvs2-201ENSMUST00000019920 2717 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Msh6P54276 Yipf5-201ENSMUST00000025364 2329 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Msh6P54276 Zfp691-204ENSMUST00000179290 1721 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Msh6P54276 Obsl1-202ENSMUST00000113567 5679 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Msh6P54276 Akirin2-201ENSMUST00000084299 1397 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Msh6P54276 Krt9-201ENSMUST00000059707 2580 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Msh6P54276 Rev1-201ENSMUST00000027251 4262 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Msh6P54276 Dnm2-204ENSMUST00000165766 3063 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
Msh6P54276 Klf7-201ENSMUST00000055001 1477 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
Msh6P54276 Dpm1-209ENSMUST00000154111 2293 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Msh6P54276 Nsd3-207ENSMUST00000143445 2416 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
Msh6P54276 Exoc6-201ENSMUST00000066439 2729 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Msh6P54276 Gm12151-201ENSMUST00000121374 290 ntBASIC19.32■□□□□ 0.68
Msh6P54276 5830408C22Rik-201ENSMUST00000210072 1115 ntTSL 5 BASIC19.32■□□□□ 0.68
Msh6P54276 Prob1-201ENSMUST00000097619 3021 ntBASIC19.32■□□□□ 0.68
Msh6P54276 Luc7l-203ENSMUST00000119928 1441 ntAPPRIS ALT2 TSL 5 BASIC19.31■□□□□ 0.68
Retrieved 100 of 76,532 protein–RNA pairs in 41.6 ms