Protein–RNA interactions for Protein: P53784

Sox3, Transcription factor SOX-3, mousemouse

Predictions only

Length 375 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox3P53784 Klk14-201ENSMUST00000056329 1271 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Sox3P53784 Dnajb8-201ENSMUST00000061866 990 ntAPPRIS P1 BASIC14.71□□□□□ -0.05
Sox3P53784 Nrg2-203ENSMUST00000115713 3001 ntAPPRIS P1 TSL 5 BASIC14.71□□□□□ -0.05
Sox3P53784 Psmc4-201ENSMUST00000032824 1440 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Sox3P53784 Dand5-201ENSMUST00000065539 1584 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Sox3P53784 Hnrnpul1-205ENSMUST00000206832 3784 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Sox3P53784 Tcf3-201ENSMUST00000020377 2842 ntAPPRIS ALT2 TSL 5 BASIC14.71□□□□□ -0.05
Sox3P53784 Cd151-203ENSMUST00000177840 1708 ntAPPRIS P1 TSL 5 BASIC14.71□□□□□ -0.05
Sox3P53784 Ppp4r3a-202ENSMUST00000163095 4083 ntTSL 5 BASIC14.71□□□□□ -0.05
Sox3P53784 Six3os1-212ENSMUST00000177220 5601 ntTSL 1 (best) BASIC14.71□□□□□ -0.06
Sox3P53784 4930524O07Rik-203ENSMUST00000193135 2289 ntBASIC14.71□□□□□ -0.06
Sox3P53784 Fam83h-202ENSMUST00000170153 4534 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.06
Sox3P53784 Gm13425-201ENSMUST00000145389 5391 ntTSL 3 BASIC14.7□□□□□ -0.06
Sox3P53784 Dclk2-201ENSMUST00000029719 4012 ntAPPRIS P3 TSL 1 (best) BASIC14.7□□□□□ -0.06
Sox3P53784 Rarb-201ENSMUST00000063750 3108 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Sox3P53784 P2ry6-201ENSMUST00000060174 1946 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Sox3P53784 Pnkp-203ENSMUST00000107876 1770 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Sox3P53784 Il11ra1-204ENSMUST00000108042 1768 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Sox3P53784 Dab2ip-202ENSMUST00000091010 6455 ntAPPRIS ALT2 TSL 1 (best) BASIC14.7□□□□□ -0.06
Sox3P53784 9630013D21Rik-204ENSMUST00000156790 3096 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
Sox3P53784 Tox2-201ENSMUST00000099110 2166 ntAPPRIS ALT2 TSL 5 BASIC14.7□□□□□ -0.06
Sox3P53784 Arhgap11a-204ENSMUST00000110949 4458 ntAPPRIS P2 TSL 5 BASIC14.7□□□□□ -0.06
Sox3P53784 Arhgef10l-201ENSMUST00000039204 4493 ntAPPRIS P4 TSL 1 (best) BASIC14.7□□□□□ -0.06
Sox3P53784 Ttll9-202ENSMUST00000103155 1552 ntAPPRIS P3 TSL 1 (best) BASIC14.7□□□□□ -0.06
Sox3P53784 Gm26568-201ENSMUST00000180496 1594 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
Sox3P53784 Ppcs-202ENSMUST00000106316 954 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
Sox3P53784 Naa10-203ENSMUST00000114387 979 ntAPPRIS ALT2 TSL 2 BASIC14.7□□□□□ -0.06
Sox3P53784 Acyp1-203ENSMUST00000117138 735 ntAPPRIS P1 TSL 2 BASIC14.7□□□□□ -0.06
Sox3P53784 Gm4459-201ENSMUST00000118750 468 ntBASIC14.7□□□□□ -0.06
Sox3P53784 1700003M07Rik-202ENSMUST00000147634 564 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
Sox3P53784 AA543401-201ENSMUST00000164248 1269 ntBASIC14.7□□□□□ -0.06
Sox3P53784 Tspan18-201ENSMUST00000028646 1203 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Sox3P53784 Lce1b-201ENSMUST00000029531 647 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Sox3P53784 Acyp2-201ENSMUST00000074613 863 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Sox3P53784 Phc2-201ENSMUST00000030588 3949 ntAPPRIS P3 TSL 5 BASIC14.7□□□□□ -0.06
Sox3P53784 Ggnbp2-211ENSMUST00000168434 3056 ntAPPRIS ALT1 TSL 5 BASIC14.7□□□□□ -0.06
Sox3P53784 Actn3-201ENSMUST00000006626 2880 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Sox3P53784 Ppp6r2-208ENSMUST00000228284 3297 ntAPPRIS P1 BASIC14.7□□□□□ -0.06
Sox3P53784 Cstf2-203ENSMUST00000113287 3661 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
Sox3P53784 D17Wsu92e-202ENSMUST00000114859 3522 ntAPPRIS ALT2 TSL 1 (best) BASIC14.7□□□□□ -0.06
Sox3P53784 Gbe1-203ENSMUST00000163832 2984 ntAPPRIS P5 TSL 5 BASIC14.7□□□□□ -0.06
Sox3P53784 Snx14-206ENSMUST00000173039 2970 ntTSL 5 BASIC14.7□□□□□ -0.06
Sox3P53784 Cdyl2-201ENSMUST00000109102 2411 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Sox3P53784 Cacna1i-202ENSMUST00000160424 9781 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Sox3P53784 Nagpa-201ENSMUST00000023911 2143 ntAPPRIS P2 TSL 1 (best) BASIC14.69□□□□□ -0.06
Sox3P53784 Dlgap1-207ENSMUST00000133983 7173 ntAPPRIS ALT2 TSL 1 (best) BASIC14.69□□□□□ -0.06
Sox3P53784 Rnf220-203ENSMUST00000102690 1842 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
Sox3P53784 Trim50-201ENSMUST00000065785 1803 ntAPPRIS P2 TSL 1 (best) BASIC14.69□□□□□ -0.06
Sox3P53784 Hacd3-201ENSMUST00000036615 2709 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Sox3P53784 Dohh-201ENSMUST00000072751 1444 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Sox3P53784 Rmi2-201ENSMUST00000037913 3742 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Sox3P53784 Kif26a-201ENSMUST00000128402 6918 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Sox3P53784 Prmt6-203ENSMUST00000190378 3051 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Sox3P53784 Tmem253-201ENSMUST00000100638 1234 ntAPPRIS P2 TSL 1 (best) BASIC14.69□□□□□ -0.06
Sox3P53784 Mafg-203ENSMUST00000106181 840 ntAPPRIS P1 TSL 3 BASIC14.69□□□□□ -0.06
Sox3P53784 Ern1-202ENSMUST00000106799 660 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
Sox3P53784 Pcp2-204ENSMUST00000136105 504 ntAPPRIS P4 TSL 1 (best) BASIC14.69□□□□□ -0.06
Sox3P53784 Fam241b-208ENSMUST00000142796 1135 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Sox3P53784 Gm15862-201ENSMUST00000146349 361 ntTSL 2 BASIC14.69□□□□□ -0.06
Sox3P53784 Psma6-204ENSMUST00000163070 787 ntTSL 5 BASIC14.69□□□□□ -0.06
Sox3P53784 AA465934-202ENSMUST00000176545 356 ntTSL 2 BASIC14.69□□□□□ -0.06
Sox3P53784 Gm5745-201ENSMUST00000183748 313 ntBASIC14.69□□□□□ -0.06
Sox3P53784 Scamp5-203ENSMUST00000214256 1025 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Sox3P53784 AC110091.2-202ENSMUST00000216718 1148 ntTSL 5 BASIC14.69□□□□□ -0.06
Sox3P53784 Gm8655-201ENSMUST00000221159 852 ntBASIC14.69□□□□□ -0.06
Sox3P53784 2010107E04Rik-203ENSMUST00000222874 612 ntAPPRIS P1 TSL 2 BASIC14.69□□□□□ -0.06
Sox3P53784 Slc5a5-201ENSMUST00000000809 2928 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Sox3P53784 Neil3-201ENSMUST00000047768 2253 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Sox3P53784 Rufy3-205ENSMUST00000198965 3536 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Sox3P53784 Tmem184b-201ENSMUST00000074991 3361 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Sox3P53784 Lrrc56-203ENSMUST00000084446 2390 ntAPPRIS ALT2 TSL 1 (best) BASIC14.69□□□□□ -0.06
Sox3P53784 Crem-234ENSMUST00000154470 1996 ntTSL 5 BASIC14.69□□□□□ -0.06
Sox3P53784 Slc23a3-201ENSMUST00000027405 2059 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Sox3P53784 Pias3-201ENSMUST00000064900 2931 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Sox3P53784 Fam174b-201ENSMUST00000107456 2683 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Sox3P53784 Stk40-202ENSMUST00000116286 3860 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
Sox3P53784 H2afy2-201ENSMUST00000020283 2175 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Sox3P53784 Sdf4-203ENSMUST00000105578 1654 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Sox3P53784 Tpcn1-201ENSMUST00000046426 4712 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Sox3P53784 Myo16-204ENSMUST00000208309 2462 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
Sox3P53784 Dennd1a-201ENSMUST00000102787 4342 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Sox3P53784 Aaed1-207ENSMUST00000222570 3011 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Sox3P53784 Eif5-201ENSMUST00000050993 1969 ntAPPRIS P2 TSL 1 (best) BASIC14.68□□□□□ -0.06
Sox3P53784 Tnnc2-201ENSMUST00000103095 700 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Sox3P53784 Mrpl55-204ENSMUST00000108786 757 ntTSL 2 BASIC14.68□□□□□ -0.06
Sox3P53784 Prmt7-203ENSMUST00000109297 1094 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
Sox3P53784 Gm13616-201ENSMUST00000120600 222 ntBASIC14.68□□□□□ -0.06
Sox3P53784 Hbb-bh0-201ENSMUST00000124800 129 ntBASIC14.68□□□□□ -0.06
Sox3P53784 Tsc22d1-208ENSMUST00000142683 797 ntTSL 3 BASIC14.68□□□□□ -0.06
Sox3P53784 Caly-202ENSMUST00000166758 1220 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Sox3P53784 1700030N18Rik-201ENSMUST00000202497 966 ntBASIC14.68□□□□□ -0.06
Sox3P53784 Gm30684-201ENSMUST00000205632 600 ntTSL 3 BASIC14.68□□□□□ -0.06
Sox3P53784 AC114585.2-202ENSMUST00000228094 426 ntBASIC14.68□□□□□ -0.06
Sox3P53784 Crb3-201ENSMUST00000071826 1194 ntAPPRIS P3 TSL 3 BASIC14.68□□□□□ -0.06
Sox3P53784 Chchd2-201ENSMUST00000094280 915 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Sox3P53784 Nup98-205ENSMUST00000211022 3132 ntTSL 2 BASIC14.68□□□□□ -0.06
Sox3P53784 Eda-206ENSMUST00000113779 4955 ntAPPRIS P3 TSL 1 (best) BASIC14.68□□□□□ -0.06
Sox3P53784 Tpm2-202ENSMUST00000107913 2098 ntAPPRIS P3 TSL 1 (best) BASIC14.68□□□□□ -0.06
Sox3P53784 Espnl-202ENSMUST00000176156 2886 ntTSL 5 BASIC14.68□□□□□ -0.06
Sox3P53784 Cep57-201ENSMUST00000034398 2523 ntAPPRIS P3 TSL 1 (best) BASIC14.68□□□□□ -0.06
Retrieved 100 of 76,532 protein–RNA pairs in 20.4 ms