Protein–RNA interactions for Protein: P52946

Pdx1, Pancreas/duodenum homeobox protein 1, mousemouse

Predictions only

Length 284 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pdx1P52946 Rprd1a-201ENSMUST00000046206 4297 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Pdx1P52946 Spon1-202ENSMUST00000084696 5201 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
Pdx1P52946 Jade2-201ENSMUST00000020655 6273 ntAPPRIS P2 TSL 1 (best) BASIC15.18■□□□□ 0.02
Pdx1P52946 Tnnt1-203ENSMUST00000108587 1059 ntAPPRIS ALT2 TSL 1 (best) BASIC15.18■□□□□ 0.02
Pdx1P52946 Dusp13-208ENSMUST00000183698 1019 ntTSL 5 BASIC15.18■□□□□ 0.02
Pdx1P52946 Gm10419-203ENSMUST00000197854 653 ntTSL 5 BASIC15.18■□□□□ 0.02
Pdx1P52946 Stard3nl-208ENSMUST00000200323 1128 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
Pdx1P52946 Olfr30-201ENSMUST00000055204 1066 ntAPPRIS P1 BASIC15.18■□□□□ 0.02
Pdx1P52946 BC037039-201ENSMUST00000192003 2205 ntBASIC15.18■□□□□ 0.02
Pdx1P52946 Efnb3-201ENSMUST00000004036 3183 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Pdx1P52946 Ube2j2-203ENSMUST00000105581 1391 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Pdx1P52946 Klhl26-204ENSMUST00000209567 2615 ntTSL 3 BASIC15.18■□□□□ 0.02
Pdx1P52946 Slc25a29-201ENSMUST00000021693 1976 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Pdx1P52946 Slc35f4-205ENSMUST00000146164 2480 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
Pdx1P52946 Gm26755-201ENSMUST00000180703 2657 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
Pdx1P52946 Tbl1x-201ENSMUST00000088217 5234 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Pdx1P52946 Ier5-201ENSMUST00000055322 3276 ntAPPRIS P1 BASIC15.18■□□□□ 0.02
Pdx1P52946 9130401M01Rik-201ENSMUST00000100655 1341 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Pdx1P52946 Rnf220-203ENSMUST00000102690 1842 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
Pdx1P52946 Prkab1-202ENSMUST00000111999 2026 ntAPPRIS P1 TSL 2 BASIC15.17■□□□□ 0.02
Pdx1P52946 Large2-203ENSMUST00000111284 2449 ntAPPRIS ALT2 TSL 5 BASIC15.17■□□□□ 0.02
Pdx1P52946 Errfi1-201ENSMUST00000030811 3043 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Pdx1P52946 Six3os1-212ENSMUST00000177220 5601 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
Pdx1P52946 Rb1cc1-201ENSMUST00000027040 7607 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Pdx1P52946 Lpgat1-201ENSMUST00000110855 7233 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Pdx1P52946 Cobl-203ENSMUST00000109651 5541 ntAPPRIS ALT2 TSL 1 (best) BASIC15.17■□□□□ 0.02
Pdx1P52946 Slc35f1-201ENSMUST00000105473 4941 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Pdx1P52946 Pus1-204ENSMUST00000112426 1389 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
Pdx1P52946 Ftl2-ps-201ENSMUST00000118517 552 ntBASIC15.17■□□□□ 0.02
Pdx1P52946 Mkln1os-202ENSMUST00000144232 964 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
Pdx1P52946 H2-T-ps-201ENSMUST00000172538 1067 ntBASIC15.17■□□□□ 0.02
Pdx1P52946 Gm5253-201ENSMUST00000187104 1025 ntBASIC15.17■□□□□ 0.02
Pdx1P52946 Gm2651-201ENSMUST00000203560 838 ntBASIC15.17■□□□□ 0.02
Pdx1P52946 Bhlha9-201ENSMUST00000056184 1207 ntAPPRIS P1 BASIC15.17■□□□□ 0.02
Pdx1P52946 Rhox6-201ENSMUST00000006362 1010 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Pdx1P52946 Gsdmcl1-201ENSMUST00000071847 1133 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
Pdx1P52946 Gm15590-201ENSMUST00000078419 552 ntBASIC15.17■□□□□ 0.02
Pdx1P52946 Psma5-201ENSMUST00000090569 1239 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Pdx1P52946 Nell1-201ENSMUST00000081872 6617 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Pdx1P52946 Ppp1r2-201ENSMUST00000060188 4078 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Pdx1P52946 Fam83h-202ENSMUST00000170153 4534 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Pdx1P52946 Ccdc115-201ENSMUST00000042493 1705 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Pdx1P52946 Ptgs1-201ENSMUST00000062069 2867 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Pdx1P52946 Skor1-203ENSMUST00000119146 3610 ntAPPRIS ALT2 TSL 1 (best) BASIC15.17■□□□□ 0.02
Pdx1P52946 Mllt1-201ENSMUST00000025053 3608 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Pdx1P52946 Nmur1-203ENSMUST00000212541 1534 ntTSL 5 BASIC15.17■□□□□ 0.02
Pdx1P52946 Ppp6r2-208ENSMUST00000228284 3297 ntAPPRIS P1 BASIC15.16■□□□□ 0.02
Pdx1P52946 Micall1-201ENSMUST00000040320 6701 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Pdx1P52946 1600014C10Rik-208ENSMUST00000179525 2326 ntTSL 2 BASIC15.16■□□□□ 0.02
Pdx1P52946 Ptpn2-201ENSMUST00000025420 1568 ntAPPRIS P3 TSL 1 (best) BASIC15.16■□□□□ 0.02
Pdx1P52946 Ntng1-203ENSMUST00000106570 1386 ntTSL 5 BASIC15.16■□□□□ 0.02
Pdx1P52946 Dtd1-201ENSMUST00000028917 1350 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Pdx1P52946 Zxdc-202ENSMUST00000075117 4126 ntAPPRIS P3 TSL 1 (best) BASIC15.16■□□□□ 0.02
Pdx1P52946 Slit1-203ENSMUST00000169141 5673 ntTSL 5 BASIC15.16■□□□□ 0.02
Pdx1P52946 Pdpk1-201ENSMUST00000052462 1832 ntAPPRIS ALT2 TSL 1 (best) BASIC15.16■□□□□ 0.02
Pdx1P52946 Casz1-202ENSMUST00000122222 7926 ntAPPRIS P1 TSL 5 BASIC15.16■□□□□ 0.02
Pdx1P52946 H13-203ENSMUST00000109825 1063 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
Pdx1P52946 Gm13036-201ENSMUST00000117799 748 ntBASIC15.16■□□□□ 0.02
Pdx1P52946 Gm12350-201ENSMUST00000121208 462 ntBASIC15.16■□□□□ 0.02
Pdx1P52946 Rps15-ps2-201ENSMUST00000121788 438 ntBASIC15.16■□□□□ 0.02
Pdx1P52946 Sec22b-202ENSMUST00000122288 1177 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
Pdx1P52946 Csrp3-202ENSMUST00000167786 899 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Pdx1P52946 Mir5126-201ENSMUST00000175513 77 ntBASIC15.16■□□□□ 0.02
Pdx1P52946 Flg-204ENSMUST00000178752 756 ntAPPRIS ALT2 BASIC15.16■□□□□ 0.02
Pdx1P52946 Gm9682-201ENSMUST00000197505 556 ntBASIC15.16■□□□□ 0.02
Pdx1P52946 Tmem270-202ENSMUST00000201316 847 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Pdx1P52946 Gm45167-201ENSMUST00000208007 322 ntBASIC15.16■□□□□ 0.02
Pdx1P52946 Scamp5-203ENSMUST00000214256 1025 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Pdx1P52946 AC151836.1-202ENSMUST00000226259 753 ntBASIC15.16■□□□□ 0.02
Pdx1P52946 Lce3c-201ENSMUST00000055375 567 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Pdx1P52946 Hist1h3c-201ENSMUST00000091752 630 ntAPPRIS P1 BASIC15.16■□□□□ 0.02
Pdx1P52946 App-203ENSMUST00000226801 3299 ntAPPRIS ALT2 BASIC15.16■□□□□ 0.02
Pdx1P52946 Acadvl-202ENSMUST00000102574 2168 ntAPPRIS P2 TSL 1 (best) BASIC15.16■□□□□ 0.02
Pdx1P52946 Soga3-201ENSMUST00000092629 4105 ntAPPRIS P1 TSL 5 BASIC15.16■□□□□ 0.02
Pdx1P52946 Ankhd1-214ENSMUST00000155329 8223 ntAPPRIS P1 TSL 5 BASIC15.16■□□□□ 0.02
Pdx1P52946 Anks1b-214ENSMUST00000182356 7561 ntTSL 5 BASIC15.16■□□□□ 0.02
Pdx1P52946 Espn-212ENSMUST00000105658 2815 ntAPPRIS ALT2 TSL 5 BASIC15.16■□□□□ 0.02
Pdx1P52946 Zfp219-212ENSMUST00000228580 2812 ntAPPRIS ALT2 BASIC15.16■□□□□ 0.02
Pdx1P52946 Gm12866-201ENSMUST00000128998 1671 ntTSL 2 BASIC15.16■□□□□ 0.02
Pdx1P52946 Lats1-202ENSMUST00000165952 7209 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Pdx1P52946 Wt1-201ENSMUST00000111098 2395 ntTSL 5 BASIC15.16■□□□□ 0.02
Pdx1P52946 Syn1-201ENSMUST00000081893 3209 ntAPPRIS P4 TSL 5 BASIC15.15■□□□□ 0.02
Pdx1P52946 Mob4-202ENSMUST00000159311 1816 ntTSL 3 BASIC15.15■□□□□ 0.02
Pdx1P52946 Gm37711-201ENSMUST00000194907 1749 ntTSL 5 BASIC15.15■□□□□ 0.02
Pdx1P52946 Fam219a-201ENSMUST00000108049 3296 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
Pdx1P52946 Nsmaf-201ENSMUST00000029910 3507 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Pdx1P52946 Nap1l1-206ENSMUST00000219143 1365 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
Pdx1P52946 Gss-201ENSMUST00000079691 1963 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Pdx1P52946 Sphk1-204ENSMUST00000106386 1879 ntAPPRIS ALT2 TSL 1 (best) BASIC15.15■□□□□ 0.02
Pdx1P52946 Tango6-202ENSMUST00000211979 2722 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
Pdx1P52946 Arl4a-201ENSMUST00000101472 1200 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Pdx1P52946 Frs3os-201ENSMUST00000136531 978 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
Pdx1P52946 Gm15598-201ENSMUST00000156965 763 ntTSL 5 BASIC15.15■□□□□ 0.02
Pdx1P52946 Gm18489-201ENSMUST00000172565 551 ntBASIC15.15■□□□□ 0.02
Pdx1P52946 4930442P19Rik-201ENSMUST00000193163 1240 ntBASIC15.15■□□□□ 0.02
Pdx1P52946 Gm20337-201ENSMUST00000219062 1118 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
Pdx1P52946 Wdyhv1-204ENSMUST00000226955 1094 ntBASIC15.15■□□□□ 0.02
Pdx1P52946 Sgpp1-202ENSMUST00000220285 3200 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
Pdx1P52946 Nov-201ENSMUST00000050027 2869 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Pdx1P52946 Adcy3-207ENSMUST00000152065 4728 ntAPPRIS ALT1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Retrieved 100 of 76,532 protein–RNA pairs in 45.6 ms