Protein–RNA interactions for Protein: P48437

Prox1, Prospero homeobox protein 1, mousemouse

Predictions only

Length 737 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Prox1P48437 Lrrc41-201ENSMUST00000030471 3065 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Prox1P48437 Ubn2-201ENSMUST00000039127 4243 ntAPPRIS ALT2 TSL 1 (best) BASIC14.79□□□□□ -0.04
Prox1P48437 Nacc2-201ENSMUST00000028300 6378 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Prox1P48437 Rps6ka5-201ENSMUST00000043599 4406 ntAPPRIS P2 TSL 1 (best) BASIC14.79□□□□□ -0.04
Prox1P48437 Kif1c-203ENSMUST00000102554 6684 ntAPPRIS P2 TSL 5 BASIC14.79□□□□□ -0.04
Prox1P48437 Ablim2-205ENSMUST00000114205 2579 ntAPPRIS ALT2 TSL 5 BASIC14.79□□□□□ -0.04
Prox1P48437 Hoxd12-201ENSMUST00000001878 2534 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Prox1P48437 Gm10010-201ENSMUST00000071101 2346 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
Prox1P48437 Gm45504-201ENSMUST00000211407 2107 ntBASIC14.78□□□□□ -0.04
Prox1P48437 Ccnj-202ENSMUST00000119316 3763 ntAPPRIS P1 TSL 5 BASIC14.78□□□□□ -0.04
Prox1P48437 Sema6c-213ENSMUST00000168321 3553 ntAPPRIS ALT2 TSL 1 (best) BASIC14.78□□□□□ -0.04
Prox1P48437 Rab34-203ENSMUST00000108322 1685 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Prox1P48437 Moxd1-201ENSMUST00000095784 3090 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Prox1P48437 Adam10-201ENSMUST00000067880 4593 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Prox1P48437 4933428G20Rik-201ENSMUST00000056955 1425 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Prox1P48437 Foxo3-203ENSMUST00000105502 6848 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Prox1P48437 1300014J16Rik-201ENSMUST00000219015 1337 ntBASIC14.78□□□□□ -0.04
Prox1P48437 Ubc-203ENSMUST00000156249 2581 ntAPPRIS P1 TSL 2 BASIC14.78□□□□□ -0.04
Prox1P48437 1110065P20Rik-204ENSMUST00000163946 762 ntTSL 2 BASIC14.78□□□□□ -0.04
Prox1P48437 Psmd13-209ENSMUST00000164681 726 ntTSL 5 BASIC14.78□□□□□ -0.04
Prox1P48437 Lsm1-203ENSMUST00000211168 343 ntTSL 3 BASIC14.78□□□□□ -0.04
Prox1P48437 Fgf8-201ENSMUST00000026240 1117 ntAPPRIS P4 TSL 1 (best) BASIC14.78□□□□□ -0.04
Prox1P48437 Sdhaf4-201ENSMUST00000027338 683 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Prox1P48437 Tpgs2-202ENSMUST00000148255 3424 ntAPPRIS ALT2 TSL 1 (best) BASIC14.78□□□□□ -0.04
Prox1P48437 Rassf5-203ENSMUST00000112442 3388 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
Prox1P48437 Ankrd13b-202ENSMUST00000092892 3336 ntAPPRIS P2 TSL 5 BASIC14.78□□□□□ -0.04
Prox1P48437 Traf2-202ENSMUST00000114234 2151 ntAPPRIS ALT2 TSL 5 BASIC14.78□□□□□ -0.04
Prox1P48437 Fam149b-216ENSMUST00000225942 2151 ntAPPRIS ALT2 BASIC14.78□□□□□ -0.04
Prox1P48437 Thnsl2-202ENSMUST00000160918 2077 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Prox1P48437 Mettl21a-202ENSMUST00000114079 2030 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Prox1P48437 Arid3a-203ENSMUST00000105377 4952 ntAPPRIS ALT2 TSL 1 (best) BASIC14.78□□□□□ -0.04
Prox1P48437 Etl4-208ENSMUST00000114614 5898 ntAPPRIS ALT2 TSL 1 (best) BASIC14.78□□□□□ -0.04
Prox1P48437 Nupr1l-201ENSMUST00000178355 1827 ntAPPRIS P1 BASIC14.78□□□□□ -0.04
Prox1P48437 Asb2-201ENSMUST00000021617 2690 ntAPPRIS P2 TSL 1 (best) BASIC14.78□□□□□ -0.04
Prox1P48437 Cnot10-206ENSMUST00000216785 1723 ntTSL 5 BASIC14.78□□□□□ -0.04
Prox1P48437 Fbxo46-202ENSMUST00000165913 2498 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
Prox1P48437 Mamstr-201ENSMUST00000148532 1606 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
Prox1P48437 Gnat1-201ENSMUST00000010205 2328 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
Prox1P48437 Rhpn1-202ENSMUST00000121137 2283 ntAPPRIS ALT2 TSL 1 (best) BASIC14.77□□□□□ -0.04
Prox1P48437 Cdc37l1-204ENSMUST00000224511 2944 ntAPPRIS ALT2 BASIC14.77□□□□□ -0.04
Prox1P48437 Sh3glb1-205ENSMUST00000199854 1416 ntTSL 5 BASIC14.77□□□□□ -0.04
Prox1P48437 Haghl-201ENSMUST00000077938 1405 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
Prox1P48437 Mob2-206ENSMUST00000211206 2140 ntTSL 1 (best) BASIC14.77□□□□□ -0.04
Prox1P48437 Loxl4-203ENSMUST00000164786 2617 ntAPPRIS ALT2 TSL 1 (best) BASIC14.77□□□□□ -0.04
Prox1P48437 Dnaja3-201ENSMUST00000060067 2648 ntAPPRIS P3 TSL 1 (best) BASIC14.77□□□□□ -0.04
Prox1P48437 Npb-202ENSMUST00000106194 530 ntAPPRIS ALT2 TSL 2 BASIC14.77□□□□□ -0.05
Prox1P48437 Npb-203ENSMUST00000106195 542 ntAPPRIS P3 TSL 1 (best) BASIC14.77□□□□□ -0.05
Prox1P48437 0610009B22Rik-202ENSMUST00000109098 892 ntAPPRIS P1 TSL 3 BASIC14.77□□□□□ -0.05
Prox1P48437 Tmem80-202ENSMUST00000126510 959 ntAPPRIS P1 TSL 5 BASIC14.77□□□□□ -0.05
Prox1P48437 4930405A21Rik-202ENSMUST00000139042 994 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
Prox1P48437 Gm38186-201ENSMUST00000192574 449 ntTSL 3 BASIC14.77□□□□□ -0.05
Prox1P48437 Gm44430-201ENSMUST00000203376 995 ntBASIC14.77□□□□□ -0.05
Prox1P48437 Gm21559-201ENSMUST00000220638 855 ntBASIC14.77□□□□□ -0.05
Prox1P48437 Rpl39l-201ENSMUST00000044103 805 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
Prox1P48437 Sec61b-201ENSMUST00000065678 564 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
Prox1P48437 Gm8587-201ENSMUST00000076538 843 ntBASIC14.77□□□□□ -0.05
Prox1P48437 Kcng4-202ENSMUST00000164382 1875 ntAPPRIS P1 TSL 5 BASIC14.77□□□□□ -0.05
Prox1P48437 Gadd45gip1-201ENSMUST00000036734 2494 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
Prox1P48437 Cdkn1b-203ENSMUST00000204807 1757 ntAPPRIS P1 TSL 5 BASIC14.77□□□□□ -0.05
Prox1P48437 Padi4-201ENSMUST00000026381 2316 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
Prox1P48437 Large2-202ENSMUST00000090582 2291 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
Prox1P48437 Hs3st1-201ENSMUST00000053116 1684 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
Prox1P48437 Rbbp9-201ENSMUST00000028915 2170 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
Prox1P48437 Sike1-201ENSMUST00000029447 7375 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
Prox1P48437 Emd-201ENSMUST00000002029 1595 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
Prox1P48437 Dmtn-202ENSMUST00000022695 4080 ntTSL 5 BASIC14.77□□□□□ -0.05
Prox1P48437 Shd-201ENSMUST00000044216 1546 ntAPPRIS ALT2 TSL 1 (best) BASIC14.76□□□□□ -0.05
Prox1P48437 Mis12-201ENSMUST00000048807 3003 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Prox1P48437 Zyx-205ENSMUST00000203401 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC14.76□□□□□ -0.05
Prox1P48437 Cdk2-202ENSMUST00000026416 2406 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
Prox1P48437 Fam133b-205ENSMUST00000197082 1943 ntAPPRIS ALT2 TSL 5 BASIC14.76□□□□□ -0.05
Prox1P48437 Gm5357-201ENSMUST00000212720 1924 ntBASIC14.76□□□□□ -0.05
Prox1P48437 Pde4dip-201ENSMUST00000045243 6185 ntAPPRIS P3 TSL 1 (best) BASIC14.76□□□□□ -0.05
Prox1P48437 Bbs10-201ENSMUST00000040454 2744 ntAPPRIS P1 TSL 2 BASIC14.76□□□□□ -0.05
Prox1P48437 Cchcr1-201ENSMUST00000045956 2748 ntAPPRIS P2 TSL 1 (best) BASIC14.76□□□□□ -0.05
Prox1P48437 AC167013.2-201ENSMUST00000228520 2684 ntBASIC14.76□□□□□ -0.05
Prox1P48437 Rbm7-202ENSMUST00000213276 2629 ntTSL 2 BASIC14.76□□□□□ -0.05
Prox1P48437 Slc25a21-201ENSMUST00000044634 2609 ntAPPRIS P3 TSL 1 (best) BASIC14.76□□□□□ -0.05
Prox1P48437 Bpifb3-202ENSMUST00000109760 1741 ntAPPRIS P1 TSL 5 BASIC14.76□□□□□ -0.05
Prox1P48437 Sorbs1-225ENSMUST00000226047 2582 ntAPPRIS ALT2 BASIC14.76□□□□□ -0.05
Prox1P48437 Gm11355-201ENSMUST00000121120 306 ntBASIC14.76□□□□□ -0.05
Prox1P48437 Gm13025-201ENSMUST00000141469 1163 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
Prox1P48437 Chmp2a-203ENSMUST00000210587 930 ntAPPRIS P1 TSL 3 BASIC14.76□□□□□ -0.05
Prox1P48437 Ly6h-202ENSMUST00000065417 985 ntAPPRIS ALT1 TSL 2 BASIC14.76□□□□□ -0.05
Prox1P48437 Pih1d1-201ENSMUST00000085375 1185 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Prox1P48437 Arrdc1-201ENSMUST00000028349 1666 ntAPPRIS ALT2 TSL 1 (best) BASIC14.76□□□□□ -0.05
Prox1P48437 E430024P14Rik-202ENSMUST00000160177 2050 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
Prox1P48437 Pak4-202ENSMUST00000108283 2899 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Prox1P48437 Qsox1-207ENSMUST00000194632 2433 ntAPPRIS ALT2 TSL 1 (best) BASIC14.76□□□□□ -0.05
Prox1P48437 Gm9889-202ENSMUST00000206983 1577 ntBASIC14.76□□□□□ -0.05
Prox1P48437 Wnt10b-206ENSMUST00000228546 2709 ntBASIC14.76□□□□□ -0.05
Prox1P48437 Fancm-201ENSMUST00000058889 7775 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Prox1P48437 Gm42743-201ENSMUST00000051089 1511 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
Prox1P48437 Nfasc-208ENSMUST00000188307 3049 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
Prox1P48437 Cdr2l-201ENSMUST00000053288 3700 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Prox1P48437 Las1l-202ENSMUST00000113864 2581 ntAPPRIS ALT2 TSL 5 BASIC14.76□□□□□ -0.05
Prox1P48437 Mcc-202ENSMUST00000164666 3606 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
Prox1P48437 Smarca5-201ENSMUST00000043359 6113 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Prox1P48437 AC159649.2-201ENSMUST00000222984 3223 ntBASIC14.75□□□□□ -0.05
Prox1P48437 Dnajc2-203ENSMUST00000115193 2416 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
Retrieved 100 of 76,532 protein–RNA pairs in 24.1 ms