Protein–RNA interactions for Protein: P48381

Rfx3, Transcription factor RFX3, mousemouse

Predictions only

Length 749 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rfx3P48381 Gm44973-201ENSMUST00000207050 1003 ntAPPRIS P1 TSL 3 BASIC13.89□□□□□ -0.19
Rfx3P48381 Pabpn1l-202ENSMUST00000212966 1113 ntAPPRIS ALT2 TSL 1 (best) BASIC13.89□□□□□ -0.19
Rfx3P48381 Ndufb8-201ENSMUST00000026222 680 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Rfx3P48381 Hist1h2af-201ENSMUST00000073261 399 ntAPPRIS P1 BASIC13.89□□□□□ -0.19
Rfx3P48381 Psen2-204ENSMUST00000111106 2020 ntAPPRIS P2 TSL 5 BASIC13.89□□□□□ -0.19
Rfx3P48381 Tgfbr3-201ENSMUST00000031224 6087 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Rfx3P48381 Cnot10-206ENSMUST00000216785 1723 ntTSL 5 BASIC13.89□□□□□ -0.19
Rfx3P48381 Kcna1-202ENSMUST00000203094 3150 ntAPPRIS P1 BASIC13.89□□□□□ -0.19
Rfx3P48381 Derl1-201ENSMUST00000022993 3175 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Rfx3P48381 Ppp2r1a-201ENSMUST00000007708 2410 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Rfx3P48381 Ankrd33b-204ENSMUST00000123325 7466 ntAPPRIS ALT2 TSL 1 (best) BASIC13.88□□□□□ -0.19
Rfx3P48381 Anxa4-201ENSMUST00000001187 2002 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Rfx3P48381 Mapk8ip3-207ENSMUST00000121723 5410 ntAPPRIS ALT2 TSL 1 (best) BASIC13.88□□□□□ -0.19
Rfx3P48381 Arhgap44-201ENSMUST00000047463 4074 ntAPPRIS P2 TSL 1 (best) BASIC13.88□□□□□ -0.19
Rfx3P48381 Cmc2-205ENSMUST00000148235 1459 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Rfx3P48381 Phf12-201ENSMUST00000049167 4410 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Rfx3P48381 Rest-202ENSMUST00000113449 6924 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Rfx3P48381 Wnt10b-206ENSMUST00000228546 2709 ntBASIC13.88□□□□□ -0.19
Rfx3P48381 Mettl7a2-202ENSMUST00000176287 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC13.88□□□□□ -0.19
Rfx3P48381 Mettl7a2-201ENSMUST00000088142 1800 ntAPPRIS P2 TSL 1 (best) BASIC13.88□□□□□ -0.19
Rfx3P48381 Klhl26-204ENSMUST00000209567 2615 ntTSL 3 BASIC13.88□□□□□ -0.19
Rfx3P48381 Maea-201ENSMUST00000114449 2193 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Rfx3P48381 Myc-202ENSMUST00000159327 2186 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
Rfx3P48381 1810010H24Rik-201ENSMUST00000106767 1100 ntAPPRIS P2 TSL 2 BASIC13.88□□□□□ -0.19
Rfx3P48381 Mis18bp1-202ENSMUST00000124201 717 ntTSL 3 BASIC13.88□□□□□ -0.19
Rfx3P48381 Inmt-201ENSMUST00000003569 1077 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Rfx3P48381 Mrps6-201ENSMUST00000047429 846 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Rfx3P48381 Nthl1-201ENSMUST00000047611 1080 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Rfx3P48381 Sik1-201ENSMUST00000024839 4511 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Rfx3P48381 Lmnb2-202ENSMUST00000105332 1643 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
Rfx3P48381 AL691505.1-201ENSMUST00000219965 1618 ntTSL 5 BASIC13.88□□□□□ -0.19
Rfx3P48381 Ier5-201ENSMUST00000055322 3276 ntAPPRIS P1 BASIC13.88□□□□□ -0.19
Rfx3P48381 Tm9sf1-203ENSMUST00000121791 2148 ntAPPRIS P1 TSL 5 BASIC13.88□□□□□ -0.19
Rfx3P48381 Pcyt1a-202ENSMUST00000104893 4951 ntAPPRIS P1 TSL 5 BASIC13.88□□□□□ -0.19
Rfx3P48381 Zbtb14-203ENSMUST00000112676 3909 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Rfx3P48381 Pik3ap1-201ENSMUST00000059672 2615 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Rfx3P48381 Gmppa-202ENSMUST00000113584 1692 ntAPPRIS P1 TSL 5 BASIC13.88□□□□□ -0.19
Rfx3P48381 Med7-203ENSMUST00000109232 2547 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Rfx3P48381 Nit1-202ENSMUST00000111295 1335 ntAPPRIS P3 TSL 1 (best) BASIC13.88□□□□□ -0.19
Rfx3P48381 Tpbg-201ENSMUST00000006559 3603 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Rfx3P48381 Gde1-201ENSMUST00000038791 1582 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Rfx3P48381 Ppp1r11-201ENSMUST00000040402 1599 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Rfx3P48381 Oxtr-201ENSMUST00000053306 4704 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Rfx3P48381 Tle1-203ENSMUST00000074216 4369 ntAPPRIS ALT1 TSL 5 BASIC13.87□□□□□ -0.19
Rfx3P48381 Zfp90-203ENSMUST00000212606 2685 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
Rfx3P48381 Eif4g1-206ENSMUST00000115463 5378 ntAPPRIS ALT2 TSL 1 (best) BASIC13.87□□□□□ -0.19
Rfx3P48381 Ckb-201ENSMUST00000001304 1472 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Rfx3P48381 2010007H06Rik-202ENSMUST00000186025 4934 ntTSL 2 BASIC13.87□□□□□ -0.19
Rfx3P48381 Tnfrsf13c-202ENSMUST00000109535 1983 ntAPPRIS ALT2 TSL 1 (best) BASIC13.87□□□□□ -0.19
Rfx3P48381 Flrt2-202ENSMUST00000110117 3223 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Rfx3P48381 Slc6a9-201ENSMUST00000030269 3479 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Rfx3P48381 Foxg1-204ENSMUST00000179669 3973 ntAPPRIS P1 BASIC13.87□□□□□ -0.19
Rfx3P48381 Zfp13-202ENSMUST00000115516 2104 ntAPPRIS ALT2 TSL 1 (best) BASIC13.87□□□□□ -0.19
Rfx3P48381 Cdadc1-204ENSMUST00000171683 1892 ntAPPRIS ALT2 TSL 1 (best) BASIC13.87□□□□□ -0.19
Rfx3P48381 Sra1-205ENSMUST00000173875 2360 ntAPPRIS ALT2 TSL 1 (best) BASIC13.87□□□□□ -0.19
Rfx3P48381 Ncf1-201ENSMUST00000016094 2763 ntAPPRIS ALT2 TSL 1 (best) BASIC13.87□□□□□ -0.19
Rfx3P48381 Ddc-210ENSMUST00000178704 2018 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Rfx3P48381 Skor1-201ENSMUST00000055281 3657 ntAPPRIS P3 TSL 1 (best) BASIC13.87□□□□□ -0.19
Rfx3P48381 Fam8a1-201ENSMUST00000099547 3664 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Rfx3P48381 Coq6-202ENSMUST00000110276 1776 ntAPPRIS P2 TSL 5 BASIC13.87□□□□□ -0.19
Rfx3P48381 Sept8-202ENSMUST00000117061 4563 ntAPPRIS P3 TSL 1 (best) BASIC13.87□□□□□ -0.19
Rfx3P48381 Ppif-201ENSMUST00000022419 1549 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Rfx3P48381 Ovca2-201ENSMUST00000071562 2670 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Rfx3P48381 Crybb1-202ENSMUST00000112375 793 ntAPPRIS P1 TSL 3 BASIC13.87□□□□□ -0.19
Rfx3P48381 Ndufb11-201ENSMUST00000116621 908 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Rfx3P48381 Gm14859-201ENSMUST00000117752 357 ntBASIC13.87□□□□□ -0.19
Rfx3P48381 Mir142hg-201ENSMUST00000123700 269 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
Rfx3P48381 Gm7284-201ENSMUST00000131667 944 ntBASIC13.87□□□□□ -0.19
Rfx3P48381 Pafah1b3-207ENSMUST00000155118 679 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
Rfx3P48381 Gm25406-201ENSMUST00000157599 105 ntBASIC13.87□□□□□ -0.19
Rfx3P48381 Rbm4-203ENSMUST00000178615 1018 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
Rfx3P48381 Gm4316-202ENSMUST00000212490 1115 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
Rfx3P48381 Snhg10-202ENSMUST00000222812 527 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
Rfx3P48381 AC127349.1-201ENSMUST00000224590 266 ntBASIC13.87□□□□□ -0.19
Rfx3P48381 Otx2os1-206ENSMUST00000228153 787 ntBASIC13.87□□□□□ -0.19
Rfx3P48381 Upk3a-201ENSMUST00000023070 1106 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Rfx3P48381 Pym1-201ENSMUST00000065210 1156 ntAPPRIS ALT2 TSL 1 (best) BASIC13.87□□□□□ -0.19
Rfx3P48381 Pla2g12b-201ENSMUST00000009790 1091 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Rfx3P48381 Ppt1-202ENSMUST00000097902 1191 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
Rfx3P48381 Hook2-201ENSMUST00000064495 2580 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Rfx3P48381 Mycbp-201ENSMUST00000030400 1685 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Rfx3P48381 Tmem26-201ENSMUST00000080995 5048 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Rfx3P48381 Col5a3-201ENSMUST00000004201 6119 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Rfx3P48381 Pspc1-202ENSMUST00000163924 2863 ntAPPRIS ALT2 TSL 1 (best) BASIC13.87□□□□□ -0.19
Rfx3P48381 Zfp606-201ENSMUST00000098822 4748 ntAPPRIS P3 TSL 1 (best) BASIC13.87□□□□□ -0.19
Rfx3P48381 Cnksr3-201ENSMUST00000015346 3447 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Rfx3P48381 Fgfr1op2-203ENSMUST00000067404 2766 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Rfx3P48381 Pak1ip1-201ENSMUST00000046951 1722 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Rfx3P48381 Ttyh1-203ENSMUST00000119661 2512 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Rfx3P48381 Mex3c-201ENSMUST00000091852 3738 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Rfx3P48381 Mapk9-201ENSMUST00000020634 4675 ntAPPRIS P3 TSL 1 (best) BASIC13.87□□□□□ -0.19
Rfx3P48381 Pcdha4-202ENSMUST00000192512 5363 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Rfx3P48381 A430035B10Rik-204ENSMUST00000148063 2010 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
Rfx3P48381 Ilvbl-204ENSMUST00000218271 1606 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
Rfx3P48381 Cdkn1b-203ENSMUST00000204807 1757 ntAPPRIS P1 TSL 5 BASIC13.86□□□□□ -0.19
Rfx3P48381 Dse-201ENSMUST00000048010 4389 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Rfx3P48381 Fam133b-205ENSMUST00000197082 1943 ntAPPRIS ALT2 TSL 5 BASIC13.86□□□□□ -0.19
Rfx3P48381 Pdzrn3-201ENSMUST00000075994 4104 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Rfx3P48381 Eif4g3-203ENSMUST00000084215 8134 ntAPPRIS ALT2 TSL 5 BASIC13.86□□□□□ -0.19
Rfx3P48381 Ndufv2-203ENSMUST00000143987 1540 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Retrieved 100 of 76,532 protein–RNA pairs in 30 ms