Protein–RNA interactions for Protein: P42859

Htt, Huntingtin, mousemouse

Predictions only

Length 3,119 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HttP42859 Gm4984-201ENSMUST00000115987 360 ntBASIC16.17■□□□□ 0.18
HttP42859 Gnb2-209ENSMUST00000143495 1285 ntTSL 5 BASIC16.17■□□□□ 0.18
HttP42859 AC159896.2-201ENSMUST00000214753 269 ntBASIC16.17■□□□□ 0.18
HttP42859 AC154319.1-201ENSMUST00000216330 312 ntBASIC16.17■□□□□ 0.18
HttP42859 AL589735.1-201ENSMUST00000224353 270 ntBASIC16.17■□□□□ 0.18
HttP42859 Men1-206ENSMUST00000113502 2652 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
HttP42859 Col13a1-203ENSMUST00000105452 3037 ntAPPRIS ALT2 TSL 5 BASIC16.16■□□□□ 0.18
HttP42859 Fhl1-203ENSMUST00000114769 2770 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
HttP42859 Gm34086-201ENSMUST00000196486 743 ntTSL 3 BASIC16.16■□□□□ 0.18
HttP42859 Dnajc22-201ENSMUST00000061295 1564 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
HttP42859 Olfr569-201ENSMUST00000078191 945 ntAPPRIS P1 BASIC16.16■□□□□ 0.18
HttP42859 Olfr582-201ENSMUST00000098212 960 ntBASIC16.16■□□□□ 0.18
HttP42859 Osgin2-201ENSMUST00000037198 2658 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
HttP42859 Sirt5-207ENSMUST00000221515 1793 ntTSL 5 BASIC16.16■□□□□ 0.18
HttP42859 Chchd5-201ENSMUST00000035481 1325 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
HttP42859 Mapkapk3-201ENSMUST00000035194 2816 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
HttP42859 Gm26596-201ENSMUST00000180464 2655 ntBASIC16.16■□□□□ 0.18
HttP42859 Rpl17-ps10-201ENSMUST00000119383 555 ntBASIC16.16■□□□□ 0.18
HttP42859 Rpl17-ps9-201ENSMUST00000119541 555 ntBASIC16.16■□□□□ 0.18
HttP42859 Rpl17-ps4-201ENSMUST00000120241 555 ntBASIC16.16■□□□□ 0.18
HttP42859 Gm7820-201ENSMUST00000121012 1052 ntBASIC16.16■□□□□ 0.18
HttP42859 Ift20-203ENSMUST00000128788 1141 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
HttP42859 Tgif2-ps1-201ENSMUST00000203590 713 ntBASIC16.16■□□□□ 0.18
HttP42859 Reep1-202ENSMUST00000212631 953 ntTSL 5 BASIC16.16■□□□□ 0.18
HttP42859 Gm46209-201ENSMUST00000217912 553 ntBASIC16.16■□□□□ 0.18
HttP42859 Polr2e-201ENSMUST00000004786 1148 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
HttP42859 Tgif2-ps2-201ENSMUST00000061746 711 ntBASIC16.16■□□□□ 0.18
HttP42859 Hps6-201ENSMUST00000099393 2696 ntAPPRIS P1 BASIC16.16■□□□□ 0.18
HttP42859 Pou2f3-202ENSMUST00000176636 2522 ntAPPRIS P2 TSL 1 (best) BASIC16.15■□□□□ 0.18
HttP42859 Gm26891-201ENSMUST00000181644 2599 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
HttP42859 Timm10b-202ENSMUST00000106780 671 ntAPPRIS P2 TSL 2 BASIC16.15■□□□□ 0.18
HttP42859 Camp-201ENSMUST00000112022 758 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
HttP42859 Gm42921-201ENSMUST00000196670 655 ntTSL 2 BASIC16.15■□□□□ 0.18
HttP42859 Gm26953-206ENSMUST00000212840 619 ntTSL 5 BASIC16.15■□□□□ 0.18
HttP42859 Ube2i-201ENSMUST00000049911 1138 ntAPPRIS P1 TSL 3 BASIC16.15■□□□□ 0.18
HttP42859 Krtap19-3-201ENSMUST00000075284 526 ntAPPRIS P1 BASIC16.15■□□□□ 0.18
HttP42859 Sphk1-211ENSMUST00000141798 1532 ntAPPRIS P4 TSL 1 (best) BASIC16.15■□□□□ 0.18
HttP42859 Mcl1-201ENSMUST00000037947 3418 ntAPPRIS P2 TSL 1 (best) BASIC16.15■□□□□ 0.18
HttP42859 Dhrs4-201ENSMUST00000022821 1392 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
HttP42859 Aire-216ENSMUST00000156417 1627 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
HttP42859 Wscd1-203ENSMUST00000108511 2866 ntAPPRIS P1 TSL 5 BASIC16.15■□□□□ 0.18
HttP42859 A930015D03Rik-201ENSMUST00000173900 1111 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
HttP42859 Bst2-201ENSMUST00000051672 792 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
HttP42859 Tifa-203ENSMUST00000164447 1538 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
HttP42859 Slco3a1-202ENSMUST00000098371 2709 ntAPPRIS ALT1 TSL 1 (best) BASIC16.15■□□□□ 0.18
HttP42859 Kat8-201ENSMUST00000033070 1579 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
HttP42859 Nop56-202ENSMUST00000103198 1877 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
HttP42859 Rgs6-204ENSMUST00000185674 1362 ntTSL 5 BASIC16.15■□□□□ 0.18
HttP42859 Armc9-205ENSMUST00000131412 2160 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
HttP42859 Gm35409-201ENSMUST00000196412 1102 ntTSL 5 BASIC16.14■□□□□ 0.18
HttP42859 Gm18934-201ENSMUST00000216671 1044 ntBASIC16.14■□□□□ 0.18
HttP42859 H2-K1-201ENSMUST00000025181 1605 ntAPPRIS P3 TSL 1 (best) BASIC16.14■□□□□ 0.17
HttP42859 Slc29a1-202ENSMUST00000064889 1988 ntAPPRIS P3 TSL 1 (best) BASIC16.14■□□□□ 0.17
HttP42859 Yipf5-201ENSMUST00000025364 2329 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
HttP42859 Tigd3-201ENSMUST00000055911 2114 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
HttP42859 Gpr20-201ENSMUST00000064166 2144 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
HttP42859 Ttll3-206ENSMUST00000204026 1472 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
HttP42859 Matr3-214ENSMUST00000190029 2845 ntAPPRIS P1 TSL 5 BASIC16.14■□□□□ 0.17
HttP42859 Ptp4a2-207ENSMUST00000165853 3382 ntAPPRIS P1 TSL 5 BASIC16.14■□□□□ 0.17
HttP42859 Tmtc4-209ENSMUST00000148661 2719 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
HttP42859 Kctd17-202ENSMUST00000159771 986 ntAPPRIS ALT2 TSL 2 BASIC16.14■□□□□ 0.17
HttP42859 Zfp414-204ENSMUST00000166627 1211 ntAPPRIS ALT2 TSL 1 (best) BASIC16.14■□□□□ 0.17
HttP42859 Syce3-202ENSMUST00000167959 480 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
HttP42859 Agrp-202ENSMUST00000194091 734 ntAPPRIS P1 TSL 2 BASIC16.14■□□□□ 0.17
HttP42859 Srgn-201ENSMUST00000020271 938 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
HttP42859 Zfp414-201ENSMUST00000073570 1197 ntAPPRIS P2 TSL 1 (best) BASIC16.14■□□□□ 0.17
HttP42859 Tm7sf2-203ENSMUST00000159084 1351 ntTSL 5 BASIC16.14■□□□□ 0.17
HttP42859 Med16-201ENSMUST00000105378 3197 ntAPPRIS ALT2 TSL 1 (best) BASIC16.14■□□□□ 0.17
HttP42859 Matk-202ENSMUST00000117488 1980 ntAPPRIS P3 TSL 1 (best) BASIC16.14■□□□□ 0.17
HttP42859 Tmem108-204ENSMUST00000189588 2850 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
HttP42859 Crybb3-204ENSMUST00000119627 828 ntAPPRIS P1 TSL 2 BASIC16.14■□□□□ 0.17
HttP42859 Agtpbp1-213ENSMUST00000167096 508 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
HttP42859 C430014B12Rik-201ENSMUST00000181720 1001 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
HttP42859 Gm9728-201ENSMUST00000200197 1055 ntBASIC16.14■□□□□ 0.17
HttP42859 Golga7b-201ENSMUST00000087123 2823 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
HttP42859 Eif4a3-201ENSMUST00000026667 1509 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
HttP42859 AC131743.5-201ENSMUST00000220775 1618 ntBASIC16.13■□□□□ 0.17
HttP42859 Pdxdc1-202ENSMUST00000115802 2466 ntAPPRIS ALT2 TSL 1 (best) BASIC16.13■□□□□ 0.17
HttP42859 Esr1-203ENSMUST00000105589 2612 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
HttP42859 Gna12-201ENSMUST00000000153 3416 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
HttP42859 Slc9a3r1-201ENSMUST00000021077 1925 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
HttP42859 Dusp9-201ENSMUST00000019701 2722 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
HttP42859 Dsn1-201ENSMUST00000103129 2080 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
HttP42859 Gm42906-201ENSMUST00000202365 408 ntAPPRIS P1 TSL 5 BASIC16.13■□□□□ 0.17
HttP42859 Gm29154-230ENSMUST00000215044 1165 ntTSL 5 BASIC16.13■□□□□ 0.17
HttP42859 AC154527.2-201ENSMUST00000225256 1466 ntBASIC16.13■□□□□ 0.17
HttP42859 Snx14-206ENSMUST00000173039 2970 ntTSL 5 BASIC16.13■□□□□ 0.17
HttP42859 Schip1-201ENSMUST00000029346 2201 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
HttP42859 Abcd4-201ENSMUST00000021666 2309 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
HttP42859 Sel1l3-201ENSMUST00000031090 4512 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
HttP42859 Gm11791-201ENSMUST00000139327 336 ntTSL 3 BASIC16.13■□□□□ 0.17
HttP42859 Gm30934-201ENSMUST00000215803 815 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
HttP42859 CT010506.4-201ENSMUST00000225457 351 ntBASIC16.13■□□□□ 0.17
HttP42859 Mzb1-201ENSMUST00000025211 905 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
HttP42859 Gps2-201ENSMUST00000057884 1220 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
HttP42859 Rhox2e-201ENSMUST00000072167 799 ntAPPRIS P1 TSL 5 BASIC16.13■□□□□ 0.17
HttP42859 Mospd3-202ENSMUST00000111007 1318 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
HttP42859 Opn4-202ENSMUST00000168444 2075 ntAPPRIS ALT2 TSL 1 (best) BASIC16.13■□□□□ 0.17
HttP42859 Sf1-203ENSMUST00000113488 2282 ntTSL 5 BASIC16.13■□□□□ 0.17
HttP42859 Tmco4-202ENSMUST00000050949 3318 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Retrieved 100 of 76,532 protein–RNA pairs in 58.3 ms