Protein–RNA interactions for Protein: P39876

Timp3, Metalloproteinase inhibitor 3, mousemouse

Predictions only

Length 211 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Timp3P39876 Bnc1-201ENSMUST00000026096 4646 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Timp3P39876 Gm13036-201ENSMUST00000117799 748 ntBASIC12.59□□□□□ -0.39
Timp3P39876 Calcb-203ENSMUST00000182816 706 ntAPPRIS ALT2 TSL 5 BASIC12.59□□□□□ -0.39
Timp3P39876 Dusp13-208ENSMUST00000183698 1019 ntTSL 5 BASIC12.59□□□□□ -0.39
Timp3P39876 Sox2ot-202ENSMUST00000196058 753 ntTSL 3 BASIC12.59□□□□□ -0.39
Timp3P39876 Gm2213-201ENSMUST00000197485 688 ntBASIC12.59□□□□□ -0.39
Timp3P39876 4930428E07Rik-201ENSMUST00000222132 920 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
Timp3P39876 Fam26f-201ENSMUST00000062784 1094 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Timp3P39876 Commd5-201ENSMUST00000068407 1037 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Timp3P39876 1700066M21Rik-201ENSMUST00000042734 3008 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Timp3P39876 Agbl5-213ENSMUST00000201917 3579 ntAPPRIS ALT2 TSL 1 (best) BASIC12.59□□□□□ -0.39
Timp3P39876 Snx8-204ENSMUST00000196130 2547 ntAPPRIS ALT2 TSL 1 (best) BASIC12.59□□□□□ -0.39
Timp3P39876 Arhgef18-201ENSMUST00000004684 5271 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Timp3P39876 Ptprs-211ENSMUST00000223859 5588 ntBASIC12.59□□□□□ -0.39
Timp3P39876 Kifc3-203ENSMUST00000169748 3384 ntAPPRIS ALT2 TSL 1 (best) BASIC12.59□□□□□ -0.39
Timp3P39876 Maged1-201ENSMUST00000026142 2821 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Timp3P39876 Gm42473-201ENSMUST00000201056 2291 ntBASIC12.59□□□□□ -0.39
Timp3P39876 Trim11-201ENSMUST00000093061 2251 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Timp3P39876 Tbc1d1-203ENSMUST00000119756 4760 ntAPPRIS ALT2 TSL 1 (best) BASIC12.59□□□□□ -0.39
Timp3P39876 Fam102a-201ENSMUST00000048375 4223 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Timp3P39876 Ror1-201ENSMUST00000039630 5762 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Timp3P39876 Kat5-201ENSMUST00000113641 2008 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Timp3P39876 Gxylt2-201ENSMUST00000032157 7658 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Timp3P39876 Gba2-201ENSMUST00000030189 3544 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Timp3P39876 Dap3-202ENSMUST00000107491 1375 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
Timp3P39876 Vgll3-201ENSMUST00000168064 7009 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Timp3P39876 Nmur1-203ENSMUST00000212541 1534 ntTSL 5 BASIC12.58□□□□□ -0.4
Timp3P39876 Gm42743-201ENSMUST00000051089 1511 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
Timp3P39876 Msl2-201ENSMUST00000085177 4889 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Timp3P39876 Hs3st1-201ENSMUST00000053116 1684 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Timp3P39876 Gm44443-201ENSMUST00000204396 5633 ntBASIC12.58□□□□□ -0.4
Timp3P39876 Rnf139-201ENSMUST00000036904 4348 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Timp3P39876 Rexo4-201ENSMUST00000064244 2281 ntAPPRIS ALT2 TSL 1 (best) BASIC12.58□□□□□ -0.4
Timp3P39876 Hnrnpm-205ENSMUST00000139302 2428 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
Timp3P39876 Camk2d-204ENSMUST00000106400 2722 ntAPPRIS P3 TSL 1 (best) BASIC12.58□□□□□ -0.4
Timp3P39876 Zswim1-201ENSMUST00000017908 2705 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Timp3P39876 Nr3c2-203ENSMUST00000109912 5675 ntAPPRIS P2 TSL 1 (best) BASIC12.58□□□□□ -0.4
Timp3P39876 Tchh-201ENSMUST00000064257 5823 ntAPPRIS P1 TSL 5 BASIC12.58□□□□□ -0.4
Timp3P39876 Get4-202ENSMUST00000110878 1180 ntAPPRIS ALT2 TSL 1 (best) BASIC12.58□□□□□ -0.4
Timp3P39876 Chchd7-203ENSMUST00000119307 889 ntAPPRIS P1 TSL 2 BASIC12.58□□□□□ -0.4
Timp3P39876 Gm8344-201ENSMUST00000119813 856 ntBASIC12.58□□□□□ -0.4
Timp3P39876 Gm14140-201ENSMUST00000119999 995 ntBASIC12.58□□□□□ -0.4
Timp3P39876 Gm20878-206ENSMUST00000153997 903 ntAPPRIS P2 TSL 2 BASIC12.58□□□□□ -0.4
Timp3P39876 9630013D21Rik-204ENSMUST00000156790 3096 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
Timp3P39876 Gm17178-201ENSMUST00000163273 357 ntTSL 5 BASIC12.58□□□□□ -0.4
Timp3P39876 Gm43935-201ENSMUST00000203569 1050 ntBASIC12.58□□□□□ -0.4
Timp3P39876 Igflr1-201ENSMUST00000043850 1186 ntAPPRIS P2 TSL 1 (best) BASIC12.58□□□□□ -0.4
Timp3P39876 Rprd1a-201ENSMUST00000046206 4297 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Timp3P39876 Mbtps2-201ENSMUST00000058098 4797 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
Timp3P39876 Rnf145-201ENSMUST00000019333 3570 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Timp3P39876 Mllt1-201ENSMUST00000025053 3608 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Timp3P39876 Ccne2-207ENSMUST00000170901 3006 ntAPPRIS P4 TSL 1 (best) BASIC12.58□□□□□ -0.4
Timp3P39876 Ecel1-203ENSMUST00000160810 2898 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Timp3P39876 Casp8ap2-201ENSMUST00000029950 6799 ntAPPRIS P2 TSL 1 (best) BASIC12.58□□□□□ -0.4
Timp3P39876 Hist3h2a-201ENSMUST00000108817 2146 ntAPPRIS P1 BASIC12.58□□□□□ -0.4
Timp3P39876 Stk40-202ENSMUST00000116286 3860 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
Timp3P39876 Rpn2-201ENSMUST00000029171 2621 ntTSL 5 BASIC12.58□□□□□ -0.4
Timp3P39876 Zbed5-201ENSMUST00000041466 2492 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Timp3P39876 Slc12a5-207ENSMUST00000202223 5690 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Timp3P39876 Uck2-202ENSMUST00000053686 4731 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Timp3P39876 Erg-207ENSMUST00000171646 1519 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Timp3P39876 Lrrc32-203ENSMUST00000205956 4576 ntAPPRIS P1 TSL 5 BASIC12.57□□□□□ -0.4
Timp3P39876 Pitpnm2-209ENSMUST00000161938 5866 ntAPPRIS ALT2 TSL 1 (best) BASIC12.57□□□□□ -0.4
Timp3P39876 Evpl-201ENSMUST00000037007 6384 ntAPPRIS P1 TSL 2 BASIC12.57□□□□□ -0.4
Timp3P39876 Slc3a2-202ENSMUST00000170157 2813 ntAPPRIS ALT2 TSL 1 (best) BASIC12.57□□□□□ -0.4
Timp3P39876 Stat3-207ENSMUST00000138438 2506 ntTSL 5 BASIC12.57□□□□□ -0.4
Timp3P39876 Naprt-201ENSMUST00000023237 1890 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Timp3P39876 Ccdc43-201ENSMUST00000092569 2366 ntAPPRIS P2 TSL 1 (best) BASIC12.57□□□□□ -0.4
Timp3P39876 Ifrd1-201ENSMUST00000001672 3378 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Timp3P39876 Git2-204ENSMUST00000112185 5032 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Timp3P39876 Tstd3-201ENSMUST00000029915 1588 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Timp3P39876 Ppp2r1b-211ENSMUST00000176798 2074 ntAPPRIS ALT2 TSL 5 BASIC12.57□□□□□ -0.4
Timp3P39876 Hsph1-209ENSMUST00000202089 3054 ntTSL 5 BASIC12.57□□□□□ -0.4
Timp3P39876 Cdyl2-201ENSMUST00000109102 2411 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Timp3P39876 Dcaf17-201ENSMUST00000064141 1905 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Timp3P39876 Gm8784-201ENSMUST00000222096 1435 ntBASIC12.57□□□□□ -0.4
Timp3P39876 Camsap1-201ENSMUST00000091268 7978 ntAPPRIS ALT2 TSL 5 BASIC12.57□□□□□ -0.4
Timp3P39876 Nt5c-202ENSMUST00000106530 836 ntTSL 3 BASIC12.57□□□□□ -0.4
Timp3P39876 1110004F10Rik-203ENSMUST00000106608 927 ntTSL 3 BASIC12.57□□□□□ -0.4
Timp3P39876 Gm15467-201ENSMUST00000120582 445 ntBASIC12.57□□□□□ -0.4
Timp3P39876 1810008I18Rik-202ENSMUST00000187848 819 ntTSL 3 BASIC12.57□□□□□ -0.4
Timp3P39876 AC084391.1-201ENSMUST00000200651 141 ntBASIC12.57□□□□□ -0.4
Timp3P39876 Zfp524-202ENSMUST00000207901 1263 ntAPPRIS P1 TSL 5 BASIC12.57□□□□□ -0.4
Timp3P39876 Csrp2-207ENSMUST00000220409 780 ntTSL 2 BASIC12.57□□□□□ -0.4
Timp3P39876 2010003K11Rik-201ENSMUST00000048482 1165 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Timp3P39876 Wfdc6b-201ENSMUST00000094346 984 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Timp3P39876 Nfe2l2-201ENSMUST00000102672 2475 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Timp3P39876 C2cd2l-206ENSMUST00000214602 2808 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Timp3P39876 Lamc1-201ENSMUST00000027752 7622 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Timp3P39876 Col13a1-205ENSMUST00000105454 3162 ntAPPRIS P2 TSL 1 (best) BASIC12.57□□□□□ -0.4
Timp3P39876 Gm26608-201ENSMUST00000180740 1954 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Timp3P39876 Comtd1-202ENSMUST00000124549 2314 ntAPPRIS P2 TSL 1 (best) BASIC12.57□□□□□ -0.4
Timp3P39876 Alg3-201ENSMUST00000045918 1451 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Timp3P39876 Washc1-202ENSMUST00000116556 2887 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Timp3P39876 Gm11127-201ENSMUST00000113742 1344 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Timp3P39876 Dock1-206ENSMUST00000211593 2589 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Timp3P39876 Cyp2f2-201ENSMUST00000003100 1866 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Timp3P39876 Fam8a1-201ENSMUST00000099547 3664 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Timp3P39876 Pigb-207ENSMUST00000184389 2079 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Timp3P39876 Kif12-205ENSMUST00000156618 2258 ntAPPRIS ALT2 TSL 5 BASIC12.57□□□□□ -0.4
Retrieved 100 of 76,532 protein–RNA pairs in 38.5 ms