Protein–RNA interactions for Protein: P38575

Upk2, Uroplakin-2, mousemouse

Predictions only

Length 184 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Upk2P38575 Cmtm1-202ENSMUST00000160596 1900 ntAPPRIS ALT2 TSL 5 BASIC13.47□□□□□ -0.25
Upk2P38575 Cct7-201ENSMUST00000032078 2441 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Upk2P38575 P2ry2-206ENSMUST00000208340 2693 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Upk2P38575 Pkp2-201ENSMUST00000039408 2918 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Upk2P38575 Amn1-201ENSMUST00000095319 1369 ntAPPRIS ALT2 TSL 1 (best) BASIC13.46□□□□□ -0.25
Upk2P38575 E430024P14Rik-202ENSMUST00000160177 2050 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
Upk2P38575 Slc23a3-201ENSMUST00000027405 2059 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Upk2P38575 Mief1-202ENSMUST00000166030 2712 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Upk2P38575 Sash1-201ENSMUST00000015449 7183 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Upk2P38575 Gm24589-201ENSMUST00000116692 94 ntBASIC13.46□□□□□ -0.25
Upk2P38575 Hnrnpa1l2-ps-201ENSMUST00000129154 964 ntBASIC13.46□□□□□ -0.25
Upk2P38575 9130204K15Rik-201ENSMUST00000131441 867 ntTSL 5 BASIC13.46□□□□□ -0.25
Upk2P38575 Fhad1os2-201ENSMUST00000152351 945 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
Upk2P38575 1700023H06Rik-201ENSMUST00000161006 1044 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
Upk2P38575 Gm2308-201ENSMUST00000166539 1004 ntBASIC13.46□□□□□ -0.25
Upk2P38575 Gm4189-202ENSMUST00000174167 367 ntTSL 3 BASIC13.46□□□□□ -0.25
Upk2P38575 Ube2d3-212ENSMUST00000197859 3833 ntAPPRIS P2 TSL 1 (best) BASIC13.46□□□□□ -0.25
Upk2P38575 Gm44202-201ENSMUST00000203549 532 ntTSL 3 BASIC13.46□□□□□ -0.25
Upk2P38575 Abhd18-206ENSMUST00000203650 797 ntTSL 5 BASIC13.46□□□□□ -0.25
Upk2P38575 2210406O10Rik-201ENSMUST00000044964 937 ntTSL 5 BASIC13.46□□□□□ -0.25
Upk2P38575 A330070K13Rik-201ENSMUST00000063656 633 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Upk2P38575 Tnxb-202ENSMUST00000168533 9381 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
Upk2P38575 Nkain2-203ENSMUST00000191234 3760 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Upk2P38575 Tmpo-201ENSMUST00000020123 3772 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Upk2P38575 Gm10584-201ENSMUST00000207036 2628 ntBASIC13.46□□□□□ -0.25
Upk2P38575 Tbc1d2-202ENSMUST00000107750 1941 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
Upk2P38575 Smoc2-201ENSMUST00000024660 2832 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Upk2P38575 Mmp14-201ENSMUST00000089688 2596 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.26
Upk2P38575 Esco1-203ENSMUST00000115864 2148 ntAPPRIS ALT2 TSL 1 (best) BASIC13.46□□□□□ -0.26
Upk2P38575 Hoga1-201ENSMUST00000081714 1668 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.26
Upk2P38575 Ntng2-203ENSMUST00000091153 1695 ntAPPRIS ALT2 TSL 1 (best) BASIC13.46□□□□□ -0.26
Upk2P38575 Kmt5c-202ENSMUST00000108582 2774 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.26
Upk2P38575 Prtg-201ENSMUST00000055535 9148 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.26
Upk2P38575 Fnbp1-208ENSMUST00000113560 4726 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.26
Upk2P38575 Prrt2-201ENSMUST00000159916 2501 ntAPPRIS P1 TSL 5 BASIC13.46□□□□□ -0.26
Upk2P38575 Pld2-202ENSMUST00000108556 3391 ntTSL 1 (best) BASIC13.46□□□□□ -0.26
Upk2P38575 Zfp385a-201ENSMUST00000168828 2291 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.26
Upk2P38575 Ppef2-201ENSMUST00000031359 2274 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.26
Upk2P38575 Asic4-201ENSMUST00000037708 2464 ntAPPRIS P2 TSL 1 (best) BASIC13.46□□□□□ -0.26
Upk2P38575 Oas1b-203ENSMUST00000183291 1837 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.26
Upk2P38575 Tfdp2-201ENSMUST00000034982 7354 ntAPPRIS P3 TSL 1 (best) BASIC13.46□□□□□ -0.26
Upk2P38575 Coro1c-201ENSMUST00000004646 3491 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Upk2P38575 Lamp2-201ENSMUST00000016678 1769 ntAPPRIS ALT2 TSL 1 (best) BASIC13.45□□□□□ -0.26
Upk2P38575 AC154412.1-201ENSMUST00000226540 2786 ntBASIC13.45□□□□□ -0.26
Upk2P38575 Axin1-201ENSMUST00000074370 3777 ntAPPRIS P3 TSL 1 (best) BASIC13.45□□□□□ -0.26
Upk2P38575 Gm3928-201ENSMUST00000121141 1307 ntBASIC13.45□□□□□ -0.26
Upk2P38575 Gins4-201ENSMUST00000033950 1349 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Upk2P38575 Gm16976-202ENSMUST00000127408 1515 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
Upk2P38575 Tbc1d1-203ENSMUST00000119756 4760 ntAPPRIS ALT2 TSL 1 (best) BASIC13.45□□□□□ -0.26
Upk2P38575 Gm13074-201ENSMUST00000124848 2735 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
Upk2P38575 Zfp202-203ENSMUST00000168832 3329 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
Upk2P38575 Dnajc1-209ENSMUST00000166495 5497 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Upk2P38575 Rhot1-203ENSMUST00000077451 3297 ntAPPRIS ALT2 TSL 5 BASIC13.45□□□□□ -0.26
Upk2P38575 Ano10-201ENSMUST00000042546 2653 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Upk2P38575 Aldh1a3-203ENSMUST00000174209 1496 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
Upk2P38575 Gm38575-203ENSMUST00000215824 1490 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
Upk2P38575 Gm25990-201ENSMUST00000102440 86 ntBASIC13.45□□□□□ -0.26
Upk2P38575 Gm16295-201ENSMUST00000139512 643 ntTSL 3 BASIC13.45□□□□□ -0.26
Upk2P38575 Gm21887-202ENSMUST00000179760 483 ntAPPRIS ALT2 TSL 5 BASIC13.45□□□□□ -0.26
Upk2P38575 Rbm14-203ENSMUST00000180008 370 ntTSL 5 BASIC13.45□□□□□ -0.26
Upk2P38575 Mgst3-201ENSMUST00000028005 1097 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Upk2P38575 Selenov-201ENSMUST00000056589 1267 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Upk2P38575 Cd300c-201ENSMUST00000061637 690 ntAPPRIS ALT2 TSL 5 BASIC13.45□□□□□ -0.26
Upk2P38575 Rps4l-201ENSMUST00000071745 943 ntBASIC13.45□□□□□ -0.26
Upk2P38575 Aurkaip1-201ENSMUST00000084097 1159 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Upk2P38575 Cd300c-202ENSMUST00000092466 700 ntAPPRIS P5 TSL 5 BASIC13.45□□□□□ -0.26
Upk2P38575 Gm10819-201ENSMUST00000099988 561 ntBASIC13.45□□□□□ -0.26
Upk2P38575 Rtn1-202ENSMUST00000078505 3629 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
Upk2P38575 Lmnb1-201ENSMUST00000025486 2843 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Upk2P38575 Rtn3-201ENSMUST00000025667 2841 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Upk2P38575 Dnajc2-203ENSMUST00000115193 2416 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
Upk2P38575 Cables1-202ENSMUST00000171109 3396 ntAPPRIS ALT2 TSL 1 (best) BASIC13.45□□□□□ -0.26
Upk2P38575 Add1-203ENSMUST00000114335 4547 ntTSL 5 BASIC13.45□□□□□ -0.26
Upk2P38575 Ankle2-206ENSMUST00000197188 4077 ntAPPRIS P3 TSL 1 (best) BASIC13.45□□□□□ -0.26
Upk2P38575 Gm10564-201ENSMUST00000097750 3113 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
Upk2P38575 Gm45470-202ENSMUST00000210817 2192 ntTSL 5 BASIC13.45□□□□□ -0.26
Upk2P38575 Bbs10-201ENSMUST00000040454 2744 ntAPPRIS P1 TSL 2 BASIC13.45□□□□□ -0.26
Upk2P38575 Fubp3-202ENSMUST00000113482 3268 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Upk2P38575 Gm43352-201ENSMUST00000196419 3065 ntBASIC13.45□□□□□ -0.26
Upk2P38575 Gjb1-201ENSMUST00000052130 1565 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Upk2P38575 Islr2-203ENSMUST00000163897 4303 ntAPPRIS P3 TSL 2 BASIC13.45□□□□□ -0.26
Upk2P38575 Ccdc24-201ENSMUST00000106422 1365 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
Upk2P38575 Gm18856-201ENSMUST00000178096 1374 ntBASIC13.45□□□□□ -0.26
Upk2P38575 Dsg2-201ENSMUST00000059787 5766 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Upk2P38575 Gprin1-201ENSMUST00000099506 4141 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Upk2P38575 Ankrd13a-201ENSMUST00000102578 3717 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Upk2P38575 Tmem161a-214ENSMUST00000182980 2080 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
Upk2P38575 Arsi-201ENSMUST00000040359 2975 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Upk2P38575 Slc43a3-201ENSMUST00000090726 2583 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Upk2P38575 Enah-204ENSMUST00000111030 2844 ntAPPRIS ALT2 TSL 1 (best) BASIC13.44□□□□□ -0.26
Upk2P38575 Enah-212ENSMUST00000195059 2832 ntAPPRIS ALT2 TSL 1 (best) BASIC13.44□□□□□ -0.26
Upk2P38575 Dact1-201ENSMUST00000061273 3650 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
Upk2P38575 Nfs1-202ENSMUST00000109600 709 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
Upk2P38575 Snx15-207ENSMUST00000154601 767 ntTSL 5 BASIC13.44□□□□□ -0.26
Upk2P38575 Coa3-201ENSMUST00000017332 886 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Upk2P38575 Gm6376-201ENSMUST00000209407 580 ntBASIC13.44□□□□□ -0.26
Upk2P38575 Umpk-ps-201ENSMUST00000211897 827 ntBASIC13.44□□□□□ -0.26
Upk2P38575 AC148328.1-201ENSMUST00000216448 920 ntTSL 5 BASIC13.44□□□□□ -0.26
Upk2P38575 D830030K20Rik-204ENSMUST00000225885 1142 ntBASIC13.44□□□□□ -0.26
Upk2P38575 Cort-201ENSMUST00000030815 677 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Retrieved 100 of 76,532 protein–RNA pairs in 95.5 ms