Protein–RNA interactions for Protein: P38060

Hmgcl, Hydroxymethylglutaryl-CoA lyase, mitochondrial, mousemouse

Predictions only

Length 325 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HmgclP38060 Selenov-201ENSMUST00000056589 1267 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
HmgclP38060 Slc35f4-205ENSMUST00000146164 2480 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
HmgclP38060 Prnd-202ENSMUST00000110170 1969 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
HmgclP38060 Ttc14-202ENSMUST00000108210 2684 ntAPPRIS ALT2 TSL 5 BASIC15.12■□□□□ 0.01
HmgclP38060 Hoga1-201ENSMUST00000081714 1668 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
HmgclP38060 Sybu-203ENSMUST00000110269 2920 ntAPPRIS ALT2 TSL 1 (best) BASIC15.12■□□□□ 0.01
HmgclP38060 Sfmbt1-201ENSMUST00000054230 7837 ntAPPRIS P1 TSL 5 BASIC15.12■□□□□ 0.01
HmgclP38060 Sgms1-201ENSMUST00000099514 3665 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
HmgclP38060 Oas1b-203ENSMUST00000183291 1837 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
HmgclP38060 Nes-201ENSMUST00000090973 6126 ntAPPRIS P2 TSL 1 (best) BASIC15.11■□□□□ 0.01
HmgclP38060 Gm42413-201ENSMUST00000196216 338 ntTSL 5 BASIC15.11■□□□□ 0.01
HmgclP38060 Zfp810-203ENSMUST00000215202 822 ntTSL 3 BASIC15.11■□□□□ 0.01
HmgclP38060 Tmem52-201ENSMUST00000023920 932 ntAPPRIS ALT2 TSL 1 (best) BASIC15.11■□□□□ 0.01
HmgclP38060 Rptor-201ENSMUST00000026671 6594 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
HmgclP38060 Nov-201ENSMUST00000050027 2869 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
HmgclP38060 Fbxo34-201ENSMUST00000043112 2937 ntAPPRIS P3 TSL 1 (best) BASIC15.11■□□□□ 0.01
HmgclP38060 Hdhd2-203ENSMUST00000097522 2318 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
HmgclP38060 Tbc1d2-202ENSMUST00000107750 1941 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
HmgclP38060 Dcaf17-201ENSMUST00000064141 1905 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
HmgclP38060 Ccdc88b-201ENSMUST00000113440 4959 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
HmgclP38060 Tnfaip2-201ENSMUST00000102745 3762 ntAPPRIS P2 TSL 1 (best) BASIC15.11■□□□□ 0.01
HmgclP38060 Col11a2-201ENSMUST00000087497 6048 ntAPPRIS P2 TSL 2 BASIC15.11■□□□□ 0.01
HmgclP38060 Ppard-201ENSMUST00000002320 3218 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
HmgclP38060 Smoc2-201ENSMUST00000024660 2832 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
HmgclP38060 Ptpn2-201ENSMUST00000025420 1568 ntAPPRIS P3 TSL 1 (best) BASIC15.11■□□□□ 0.01
HmgclP38060 Large2-203ENSMUST00000111284 2449 ntAPPRIS ALT2 TSL 5 BASIC15.11■□□□□ 0.01
HmgclP38060 Celf3-204ENSMUST00000197558 2414 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
HmgclP38060 Kpna4-203ENSMUST00000194558 3726 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
HmgclP38060 Dnm2-211ENSMUST00000173397 3510 ntAPPRIS ALT2 TSL 1 (best) BASIC15.1■□□□□ 0.01
HmgclP38060 9430015G10Rik-208ENSMUST00000169550 2660 ntAPPRIS P1 TSL 5 BASIC15.1■□□□□ 0.01
HmgclP38060 Rflna-203ENSMUST00000197746 1649 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
HmgclP38060 Errfi1-201ENSMUST00000030811 3043 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
HmgclP38060 St8sia1-201ENSMUST00000032421 8991 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
HmgclP38060 Akap1-201ENSMUST00000018572 3758 ntAPPRIS P2 TSL 1 (best) BASIC15.1■□□□□ 0.01
HmgclP38060 Il11ra2-201ENSMUST00000108006 1299 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
HmgclP38060 Gm20496-202ENSMUST00000173770 523 ntTSL 5 BASIC15.1■□□□□ 0.01
HmgclP38060 Flg-204ENSMUST00000178752 756 ntAPPRIS ALT2 BASIC15.1■□□□□ 0.01
HmgclP38060 Lce1l-201ENSMUST00000054426 670 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
HmgclP38060 Ythdf2-201ENSMUST00000085181 955 ntTSL 2 BASIC15.1■□□□□ 0.01
HmgclP38060 Rell1-204ENSMUST00000154169 3241 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
HmgclP38060 App-203ENSMUST00000226801 3299 ntAPPRIS ALT2 BASIC15.1■□□□□ 0.01
HmgclP38060 Mindy1-212ENSMUST00000168223 1812 ntTSL 5 BASIC15.1■□□□□ 0.01
HmgclP38060 Tmem161a-214ENSMUST00000182980 2080 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
HmgclP38060 Ppp1r2-201ENSMUST00000060188 4078 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
HmgclP38060 Bclaf3-202ENSMUST00000112464 3366 ntAPPRIS P2 TSL 1 (best) BASIC15.1■□□□□ 0.01
HmgclP38060 BC037032-201ENSMUST00000140003 3974 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
HmgclP38060 Tmem200c-201ENSMUST00000178545 3213 ntAPPRIS P1 TSL 2 BASIC15.09■□□□□ 0.01
HmgclP38060 F2rl1-201ENSMUST00000022185 2741 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
HmgclP38060 Ppef2-201ENSMUST00000031359 2274 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
HmgclP38060 Dynlt1c-201ENSMUST00000092966 2589 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
HmgclP38060 Ddx39-202ENSMUST00000109810 1794 ntAPPRIS P1 TSL 5 BASIC15.09■□□□□ 0.01
HmgclP38060 Agfg1-201ENSMUST00000063380 2896 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
HmgclP38060 Tpm2-202ENSMUST00000107913 2098 ntAPPRIS P3 TSL 1 (best) BASIC15.09■□□□□ 0.01
HmgclP38060 Arl4a-201ENSMUST00000101472 1200 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
HmgclP38060 0610010K14Rik-204ENSMUST00000102569 778 ntAPPRIS P3 TSL 1 (best) BASIC15.09■□□□□ 0.01
HmgclP38060 Gm11455-201ENSMUST00000149285 733 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
HmgclP38060 Csrp3-202ENSMUST00000167786 899 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
HmgclP38060 Gm10499-201ENSMUST00000174094 934 ntBASIC15.09■□□□□ 0.01
HmgclP38060 Tnnt2-205ENSMUST00000178204 1172 ntAPPRIS ALT2 TSL 5 BASIC15.09■□□□□ 0.01
HmgclP38060 Tnnt2-207ENSMUST00000179863 1097 ntAPPRIS P4 TSL 5 BASIC15.09■□□□□ 0.01
HmgclP38060 Gm27217-201ENSMUST00000183438 882 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
HmgclP38060 Tnnt2-209ENSMUST00000188028 1200 ntAPPRIS P4 TSL 5 BASIC15.09■□□□□ 0.01
HmgclP38060 Gm37335-201ENSMUST00000192656 447 ntTSL 5 BASIC15.09■□□□□ 0.01
HmgclP38060 Gm9449-201ENSMUST00000207265 1011 ntBASIC15.09■□□□□ 0.01
HmgclP38060 AC147366.1-201ENSMUST00000227671 852 ntBASIC15.09■□□□□ 0.01
HmgclP38060 CT009510.1-201ENSMUST00000227972 270 ntBASIC15.09■□□□□ 0.01
HmgclP38060 Batf-201ENSMUST00000040536 955 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
HmgclP38060 Gchfr-201ENSMUST00000057454 645 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
HmgclP38060 Manbal-201ENSMUST00000081202 1107 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
HmgclP38060 Nrsn1-204ENSMUST00000167305 1891 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
HmgclP38060 Zfp395-201ENSMUST00000066994 4229 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
HmgclP38060 Socs4-201ENSMUST00000065562 6877 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
HmgclP38060 Ggnbp2-211ENSMUST00000168434 3056 ntAPPRIS ALT1 TSL 5 BASIC15.09■□□□□ 0.01
HmgclP38060 Matk-203ENSMUST00000119547 1916 ntAPPRIS ALT2 TSL 1 (best) BASIC15.09■□□□□ 0.01
HmgclP38060 Mllt11-201ENSMUST00000065482 1923 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
HmgclP38060 Tcf3-204ENSMUST00000105340 2826 ntAPPRIS ALT2 TSL 1 (best) BASIC15.09■□□□□ 0.01
HmgclP38060 Tcf3-202ENSMUST00000020379 2829 ntAPPRIS ALT2 TSL 1 (best) BASIC15.09■□□□□ 0.01
HmgclP38060 Foxo3-201ENSMUST00000056974 2889 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
HmgclP38060 Gm34419-201ENSMUST00000211383 1387 ntTSL 5 BASIC15.09■□□□□ 0.01
HmgclP38060 Zpbp-201ENSMUST00000020413 4248 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
HmgclP38060 Kmt5b-213ENSMUST00000176262 3933 ntAPPRIS P3 TSL 5 BASIC15.09■□□□□ 0.01
HmgclP38060 Slc35e4-202ENSMUST00000109995 3063 ntAPPRIS ALT1 TSL 5 BASIC15.08■□□□□ 0.01
HmgclP38060 Pde1c-203ENSMUST00000164037 3068 ntTSL 1 (best) BASIC15.08■□□□□ 0.01
HmgclP38060 Slc35e4-201ENSMUST00000051207 3059 ntAPPRIS P2 TSL 1 (best) BASIC15.08■□□□□ 0.01
HmgclP38060 Mapk9-205ENSMUST00000109179 4682 ntTSL 5 BASIC15.08■□□□□ 0
HmgclP38060 Mapk9-209ENSMUST00000164643 4682 ntTSL 5 BASIC15.08■□□□□ 0
HmgclP38060 Dph5-204ENSMUST00000189799 1558 ntAPPRIS P1 TSL 5 BASIC15.08■□□□□ 0
HmgclP38060 Shank3-202ENSMUST00000066545 4702 ntTSL 1 (best) BASIC15.08■□□□□ 0
HmgclP38060 Pld2-202ENSMUST00000108556 3391 ntTSL 1 (best) BASIC15.08■□□□□ 0
HmgclP38060 Tbc1d8-201ENSMUST00000054462 4451 ntAPPRIS P2 TSL 1 (best) BASIC15.08■□□□□ 0
HmgclP38060 Cog8-202ENSMUST00000095517 4476 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
HmgclP38060 Hmgb1-208ENSMUST00000139443 923 ntTSL 2 BASIC15.08■□□□□ 0
HmgclP38060 Cgrrf1-204ENSMUST00000140114 419 ntTSL 1 (best) BASIC15.08■□□□□ 0
HmgclP38060 Gm20680-201ENSMUST00000176881 789 ntTSL 5 BASIC15.08■□□□□ 0
HmgclP38060 Gm26661-201ENSMUST00000181025 471 ntAPPRIS P1 BASIC15.08■□□□□ 0
HmgclP38060 Gm27741-201ENSMUST00000185060 237 ntBASIC15.08■□□□□ 0
HmgclP38060 Gm7787-201ENSMUST00000216858 688 ntBASIC15.08■□□□□ 0
HmgclP38060 Kcnk16-201ENSMUST00000024155 916 ntAPPRIS P1 TSL 5 BASIC15.08■□□□□ 0
HmgclP38060 Mzb1-201ENSMUST00000025211 905 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
HmgclP38060 Pspn-201ENSMUST00000002740 474 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Retrieved 100 of 76,532 protein–RNA pairs in 93.3 ms