Protein–RNA interactions for Protein: P35546

Ret, Proto-oncogene tyrosine-protein kinase receptor Ret, mousemouse

Predictions only

Length 1,115 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RetP35546 Mycbp-201ENSMUST00000030400 1685 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
RetP35546 Ccdc158-204ENSMUST00000151180 3352 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
RetP35546 Tmem184b-201ENSMUST00000074991 3361 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
RetP35546 Phf21b-203ENSMUST00000159939 3639 ntAPPRIS P2 TSL 1 (best) BASIC14.39□□□□□ -0.11
RetP35546 Gjb1-203ENSMUST00000119190 1585 ntAPPRIS P1 TSL 2 BASIC14.39□□□□□ -0.11
RetP35546 Espn-212ENSMUST00000105658 2815 ntAPPRIS ALT2 TSL 5 BASIC14.38□□□□□ -0.11
RetP35546 Nap1l1-201ENSMUST00000065917 1486 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
RetP35546 Zbtb11-201ENSMUST00000050248 4920 ntAPPRIS P1 TSL 5 BASIC14.38□□□□□ -0.11
RetP35546 Mdp1-201ENSMUST00000002400 1733 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
RetP35546 Wnt10b-206ENSMUST00000228546 2709 ntBASIC14.38□□□□□ -0.11
RetP35546 Ptprs-211ENSMUST00000223859 5588 ntBASIC14.38□□□□□ -0.11
RetP35546 Ube2j2-203ENSMUST00000105581 1391 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
RetP35546 Gm28111-201ENSMUST00000187786 1393 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
RetP35546 Trim62-201ENSMUST00000035667 3752 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
RetP35546 Osr1-201ENSMUST00000057021 2012 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
RetP35546 Samd4-204ENSMUST00000125688 1773 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
RetP35546 Thap7-201ENSMUST00000100125 1248 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
RetP35546 Gm13036-201ENSMUST00000117799 748 ntBASIC14.38□□□□□ -0.11
RetP35546 Gm16194-203ENSMUST00000141239 362 ntTSL 3 BASIC14.38□□□□□ -0.11
RetP35546 Gm27628-201ENSMUST00000184911 107 ntBASIC14.38□□□□□ -0.11
RetP35546 Gm20646-202ENSMUST00000199521 660 ntTSL 3 BASIC14.38□□□□□ -0.11
RetP35546 Ppt1-202ENSMUST00000097902 1191 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
RetP35546 Tpm2-201ENSMUST00000030184 2175 ntTSL 5 BASIC14.38□□□□□ -0.11
RetP35546 Ddx39-201ENSMUST00000019576 1656 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
RetP35546 Otud4-202ENSMUST00000173078 7354 ntAPPRIS P4 TSL 1 (best) BASIC14.38□□□□□ -0.11
RetP35546 Med20-201ENSMUST00000024778 2054 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
RetP35546 Fyn-202ENSMUST00000099967 3528 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
RetP35546 Klf15-204ENSMUST00000203607 2240 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
RetP35546 Rpn2-201ENSMUST00000029171 2621 ntTSL 5 BASIC14.38□□□□□ -0.11
RetP35546 Ppp1r2-201ENSMUST00000060188 4078 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
RetP35546 Gm26608-201ENSMUST00000180740 1954 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
RetP35546 Wt1-201ENSMUST00000111098 2395 ntTSL 5 BASIC14.38□□□□□ -0.11
RetP35546 Tm9sf1-203ENSMUST00000121791 2148 ntAPPRIS P1 TSL 5 BASIC14.38□□□□□ -0.11
RetP35546 Adck2-201ENSMUST00000051249 2287 ntTSL 5 BASIC14.38□□□□□ -0.11
RetP35546 Mapk1ip1-203ENSMUST00000119664 1883 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
RetP35546 Pi4k2a-201ENSMUST00000066778 3771 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
RetP35546 H2-K1-201ENSMUST00000025181 1605 ntAPPRIS P3 TSL 1 (best) BASIC14.37□□□□□ -0.11
RetP35546 Pspc1-202ENSMUST00000163924 2863 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
RetP35546 Rnf207-201ENSMUST00000076183 2466 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
RetP35546 Kpna4-203ENSMUST00000194558 3726 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
RetP35546 Rab23-201ENSMUST00000088287 4322 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
RetP35546 Hnrnpul1-205ENSMUST00000206832 3784 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
RetP35546 Nrros-201ENSMUST00000099991 2548 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
RetP35546 Chmp4c-201ENSMUST00000029049 6188 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
RetP35546 Slc35c1-202ENSMUST00000125276 2668 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
RetP35546 Gna15-201ENSMUST00000043709 1962 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
RetP35546 Gm8097-201ENSMUST00000117903 829 ntBASIC14.37□□□□□ -0.11
RetP35546 Wdr61-203ENSMUST00000121204 1290 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
RetP35546 Hmgb1-208ENSMUST00000139443 923 ntTSL 2 BASIC14.37□□□□□ -0.11
RetP35546 Ctcflos-201ENSMUST00000142165 469 ntTSL 3 BASIC14.37□□□□□ -0.11
RetP35546 Rbmx-206ENSMUST00000143310 1296 ntTSL 5 BASIC14.37□□□□□ -0.11
RetP35546 Nudt6-208ENSMUST00000146324 1264 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
RetP35546 Gm26308-201ENSMUST00000157768 69 ntBASIC14.37□□□□□ -0.11
RetP35546 Tmem176a-202ENSMUST00000168406 1086 ntAPPRIS P1 TSL 3 BASIC14.37□□□□□ -0.11
RetP35546 Rbm14-203ENSMUST00000180008 370 ntTSL 5 BASIC14.37□□□□□ -0.11
RetP35546 4930445N18Rik-202ENSMUST00000181345 1033 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
RetP35546 Pfn3-201ENSMUST00000054146 545 ntAPPRIS P1 BASIC14.37□□□□□ -0.11
RetP35546 Prdm5-203ENSMUST00000081219 984 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
RetP35546 Ocln-205ENSMUST00000160859 2443 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
RetP35546 Cep19-202ENSMUST00000115168 1718 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
RetP35546 Tcp11-202ENSMUST00000043925 1746 ntAPPRIS ALT2 TSL 5 BASIC14.37□□□□□ -0.11
RetP35546 Tle1-203ENSMUST00000074216 4369 ntAPPRIS ALT1 TSL 5 BASIC14.37□□□□□ -0.11
RetP35546 Ttll5-204ENSMUST00000110220 2655 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
RetP35546 Faf1-201ENSMUST00000102724 4468 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
RetP35546 Dnajc1-202ENSMUST00000091418 5070 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
RetP35546 Rfx5-202ENSMUST00000107253 4367 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
RetP35546 Wipi1-201ENSMUST00000047186 3338 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
RetP35546 Smpd1-201ENSMUST00000046983 2412 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
RetP35546 Kif22-201ENSMUST00000032915 2115 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
RetP35546 Asl-205ENSMUST00000161094 1824 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
RetP35546 Gm3045-201ENSMUST00000212844 1825 ntAPPRIS P1 TSL 5 BASIC14.36□□□□□ -0.11
RetP35546 Igfbp1-201ENSMUST00000020704 1525 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
RetP35546 Rab34-201ENSMUST00000002128 1368 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
RetP35546 Gm28372-201ENSMUST00000188900 1876 ntAPPRIS P1 TSL 5 BASIC14.36□□□□□ -0.11
RetP35546 Klk6-202ENSMUST00000107967 1172 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
RetP35546 Mef2b-201ENSMUST00000110140 1223 ntAPPRIS ALT2 TSL 1 (best) BASIC14.36□□□□□ -0.11
RetP35546 Mef2b-202ENSMUST00000110141 1253 ntAPPRIS ALT2 TSL 1 (best) BASIC14.36□□□□□ -0.11
RetP35546 Znhit1-204ENSMUST00000111091 1070 ntTSL 5 BASIC14.36□□□□□ -0.11
RetP35546 Gm4995-201ENSMUST00000117247 432 ntBASIC14.36□□□□□ -0.11
RetP35546 Gm7222-201ENSMUST00000117512 906 ntBASIC14.36□□□□□ -0.11
RetP35546 Bola3-202ENSMUST00000120040 583 ntTSL 3 BASIC14.36□□□□□ -0.11
RetP35546 Sumo3-204ENSMUST00000129492 487 ntAPPRIS ALT2 TSL 2 BASIC14.36□□□□□ -0.11
RetP35546 Znhit1-206ENSMUST00000156963 1208 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
RetP35546 Ndufaf2-202ENSMUST00000223734 556 ntBASIC14.36□□□□□ -0.11
RetP35546 3830406C13Rik-207ENSMUST00000223927 1010 ntBASIC14.36□□□□□ -0.11
RetP35546 Rfx5-207ENSMUST00000137088 4333 ntAPPRIS P1 TSL 5 BASIC14.36□□□□□ -0.11
RetP35546 Pla2g16-203ENSMUST00000136756 1901 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
RetP35546 AL691505.1-201ENSMUST00000219965 1618 ntTSL 5 BASIC14.36□□□□□ -0.11
RetP35546 Tnfrsf13c-202ENSMUST00000109535 1983 ntAPPRIS ALT2 TSL 1 (best) BASIC14.36□□□□□ -0.11
RetP35546 Cnbp-203ENSMUST00000113619 1661 ntAPPRIS P2 TSL 1 (best) BASIC14.36□□□□□ -0.11
RetP35546 Ace-201ENSMUST00000001963 4906 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
RetP35546 Tmtc2-201ENSMUST00000061506 5629 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
RetP35546 4930431F12Rik-202ENSMUST00000199309 2263 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
RetP35546 A330040F15Rik-202ENSMUST00000224046 1918 ntBASIC14.35□□□□□ -0.11
RetP35546 Gde1-201ENSMUST00000038791 1582 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
RetP35546 Pex1-202ENSMUST00000121291 4555 ntAPPRIS ALT2 TSL 5 BASIC14.35□□□□□ -0.11
RetP35546 Rassf3-201ENSMUST00000026902 3522 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
RetP35546 Emilin3-202ENSMUST00000109454 3396 ntAPPRIS ALT2 TSL 5 BASIC14.35□□□□□ -0.11
RetP35546 Zswim4-201ENSMUST00000039480 4625 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
RetP35546 Mis12-206ENSMUST00000164220 1416 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Retrieved 100 of 76,532 protein–RNA pairs in 25.5 ms