Protein–RNA interactions for Protein: P35242

Sftpa1, Pulmonary surfactant-associated protein A, mousemouse

Predictions only

Length 248 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sftpa1P35242 Kpna4-201ENSMUST00000029353 8819 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Sftpa1P35242 Appbp2-201ENSMUST00000018625 6463 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Sftpa1P35242 Trpc1-204ENSMUST00000189137 4559 ntAPPRIS P3 TSL 1 (best) BASIC14.15□□□□□ -0.14
Sftpa1P35242 Cep55-203ENSMUST00000169673 2761 ntAPPRIS ALT2 TSL 1 (best) BASIC14.15□□□□□ -0.14
Sftpa1P35242 Akirin2-201ENSMUST00000084299 1397 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Sftpa1P35242 Krtap1-3-201ENSMUST00000104930 879 ntAPPRIS P1 BASIC14.15□□□□□ -0.14
Sftpa1P35242 Metrnl-202ENSMUST00000106089 1101 ntAPPRIS ALT2 TSL 5 BASIC14.15□□□□□ -0.14
Sftpa1P35242 Ppdpf-202ENSMUST00000108841 689 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Sftpa1P35242 Gm26515-201ENSMUST00000181141 996 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Sftpa1P35242 Gm27306-201ENSMUST00000183970 107 ntBASIC14.15□□□□□ -0.14
Sftpa1P35242 Gm29202-201ENSMUST00000191263 422 ntTSL 5 BASIC14.15□□□□□ -0.14
Sftpa1P35242 AC151971.1-201ENSMUST00000217329 993 ntTSL 5 BASIC14.15□□□□□ -0.14
Sftpa1P35242 Hes5-201ENSMUST00000049621 1273 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Sftpa1P35242 Ifng-201ENSMUST00000068592 1208 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Sftpa1P35242 Med8-202ENSMUST00000073881 1052 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Sftpa1P35242 Atp6v0c-202ENSMUST00000098862 796 ntAPPRIS P1 TSL 2 BASIC14.15□□□□□ -0.14
Sftpa1P35242 Plxnc1-201ENSMUST00000099337 7302 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Sftpa1P35242 Wdtc1-201ENSMUST00000043305 4191 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Sftpa1P35242 Cuedc2-202ENSMUST00000167861 1941 ntAPPRIS P1 TSL 5 BASIC14.15□□□□□ -0.14
Sftpa1P35242 Ncoa5-201ENSMUST00000040381 3179 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Sftpa1P35242 Pcbp3-206ENSMUST00000168465 1748 ntAPPRIS P3 TSL 5 BASIC14.15□□□□□ -0.14
Sftpa1P35242 Zfp865-203ENSMUST00000085427 2751 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Sftpa1P35242 Pimreg-201ENSMUST00000021164 1513 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Sftpa1P35242 Pard6g-201ENSMUST00000070219 3143 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Sftpa1P35242 H1fnt-201ENSMUST00000060855 1326 ntAPPRIS P1 BASIC14.15□□□□□ -0.15
Sftpa1P35242 Uso1-201ENSMUST00000031355 3898 ntAPPRIS P2 TSL 1 (best) BASIC14.15□□□□□ -0.15
Sftpa1P35242 Bend6-204ENSMUST00000129464 1750 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Sftpa1P35242 Nrxn2-202ENSMUST00000113458 3503 ntTSL 5 BASIC14.14□□□□□ -0.15
Sftpa1P35242 Sucla2-203ENSMUST00000160507 2229 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Sftpa1P35242 Gna12-201ENSMUST00000000153 3416 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Sftpa1P35242 Lhfp-203ENSMUST00000147139 1932 ntAPPRIS P1 TSL 5 BASIC14.14□□□□□ -0.15
Sftpa1P35242 Ccdc181-201ENSMUST00000027867 1909 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Sftpa1P35242 Dnase1l2-201ENSMUST00000088506 1921 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Sftpa1P35242 Lrrc47-205ENSMUST00000169622 3468 ntAPPRIS ALT2 TSL 1 (best) BASIC14.14□□□□□ -0.15
Sftpa1P35242 Hist1h2ae-201ENSMUST00000102969 704 ntAPPRIS P1 BASIC14.14□□□□□ -0.15
Sftpa1P35242 Nosip-202ENSMUST00000107829 972 ntAPPRIS ALT2 TSL 1 (best) BASIC14.14□□□□□ -0.15
Sftpa1P35242 Slpi-201ENSMUST00000109367 876 ntAPPRIS P2 TSL 1 (best) BASIC14.14□□□□□ -0.15
Sftpa1P35242 Cbx6-201ENSMUST00000109623 996 ntTSL 5 BASIC14.14□□□□□ -0.15
Sftpa1P35242 Tpm3-203ENSMUST00000119158 1090 ntTSL 3 BASIC14.14□□□□□ -0.15
Sftpa1P35242 Gm15693-201ENSMUST00000120470 637 ntBASIC14.14□□□□□ -0.15
Sftpa1P35242 AC155937.1-201ENSMUST00000125635 831 ntAPPRIS P1 TSL 3 BASIC14.14□□□□□ -0.15
Sftpa1P35242 Mir99ahg-211ENSMUST00000183099 1189 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Sftpa1P35242 Gtpbp10-211ENSMUST00000198799 648 ntBASIC14.14□□□□□ -0.15
Sftpa1P35242 5830408C22Rik-201ENSMUST00000210072 1115 ntTSL 5 BASIC14.14□□□□□ -0.15
Sftpa1P35242 Tpi-rs5-201ENSMUST00000216947 774 ntBASIC14.14□□□□□ -0.15
Sftpa1P35242 Cartpt-201ENSMUST00000022150 827 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Sftpa1P35242 Cartpt-202ENSMUST00000224142 1238 ntAPPRIS P1 BASIC14.14□□□□□ -0.15
Sftpa1P35242 S100a13-201ENSMUST00000048138 715 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Sftpa1P35242 Gm5771-201ENSMUST00000049079 798 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Sftpa1P35242 Tmem116-202ENSMUST00000060004 1297 ntAPPRIS P3 TSL 1 (best) BASIC14.14□□□□□ -0.15
Sftpa1P35242 Cav3-201ENSMUST00000075477 1157 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Sftpa1P35242 Casp16-ps-201ENSMUST00000088673 531 ntAPPRIS P1 TSL 5 BASIC14.14□□□□□ -0.15
Sftpa1P35242 Hist1h2ah-201ENSMUST00000091742 405 ntAPPRIS P1 BASIC14.14□□□□□ -0.15
Sftpa1P35242 Chd4-202ENSMUST00000112390 6537 ntAPPRIS ALT2 TSL 5 BASIC14.14□□□□□ -0.15
Sftpa1P35242 9330151L19Rik-201ENSMUST00000181850 2545 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Sftpa1P35242 Afg1l-201ENSMUST00000041024 2513 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Sftpa1P35242 Tnfrsf13c-202ENSMUST00000109535 1983 ntAPPRIS ALT2 TSL 1 (best) BASIC14.14□□□□□ -0.15
Sftpa1P35242 Prtg-201ENSMUST00000055535 9148 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Sftpa1P35242 Mettl7a1-201ENSMUST00000067752 1883 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Sftpa1P35242 Ppil1-201ENSMUST00000024802 1434 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Sftpa1P35242 Ssfa2-201ENSMUST00000111784 4999 ntAPPRIS ALT2 TSL 5 BASIC14.14□□□□□ -0.15
Sftpa1P35242 Stxbp3-205ENSMUST00000138552 1789 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Sftpa1P35242 Plcl2-201ENSMUST00000043938 4050 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Sftpa1P35242 Micall1-201ENSMUST00000040320 6701 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Sftpa1P35242 Ssu2-201ENSMUST00000060847 1321 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Sftpa1P35242 Gm14634-201ENSMUST00000139163 1662 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Sftpa1P35242 Six3os1-212ENSMUST00000177220 5601 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Sftpa1P35242 Acsl3-205ENSMUST00000142704 2976 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Sftpa1P35242 Sf3b4-201ENSMUST00000076372 1915 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Sftpa1P35242 Sept6-203ENSMUST00000115239 1845 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Sftpa1P35242 Shisa2-201ENSMUST00000053949 3119 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Sftpa1P35242 Stk11-202ENSMUST00000105370 1474 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Sftpa1P35242 Chrna4-202ENSMUST00000108851 2071 ntAPPRIS ALT2 TSL 5 BASIC14.13□□□□□ -0.15
Sftpa1P35242 Sebox-201ENSMUST00000001130 1351 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Sftpa1P35242 Disc1-201ENSMUST00000074562 2597 ntAPPRIS ALT2 TSL 5 BASIC14.13□□□□□ -0.15
Sftpa1P35242 Disc1-203ENSMUST00000098311 2597 ntAPPRIS ALT2 TSL 1 (best) BASIC14.13□□□□□ -0.15
Sftpa1P35242 Gm12981-201ENSMUST00000131733 622 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Sftpa1P35242 Igfbp4-204ENSMUST00000140772 742 ntTSL 2 BASIC14.13□□□□□ -0.15
Sftpa1P35242 AC155937.1-202ENSMUST00000156229 621 ntAPPRIS P1 TSL 2 BASIC14.13□□□□□ -0.15
Sftpa1P35242 Gm36536-201ENSMUST00000194241 959 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Sftpa1P35242 Gm42854-201ENSMUST00000201262 722 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Sftpa1P35242 Idh2-207ENSMUST00000206714 392 ntTSL 3 BASIC14.13□□□□□ -0.15
Sftpa1P35242 Gm45785-201ENSMUST00000209690 988 ntAPPRIS P1 TSL 5 BASIC14.13□□□□□ -0.15
Sftpa1P35242 Pabpn1l-202ENSMUST00000212966 1113 ntAPPRIS ALT2 TSL 1 (best) BASIC14.13□□□□□ -0.15
Sftpa1P35242 Nelfb-201ENSMUST00000059849 2637 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Sftpa1P35242 Mfsd12-201ENSMUST00000044844 3971 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Sftpa1P35242 Mvd-201ENSMUST00000006692 1756 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Sftpa1P35242 Atxn7l2-204ENSMUST00000119650 2274 ntTSL 5 BASIC14.13□□□□□ -0.15
Sftpa1P35242 Hr-201ENSMUST00000022691 5487 ntAPPRIS P2 TSL 1 (best) BASIC14.13□□□□□ -0.15
Sftpa1P35242 Bnip2-202ENSMUST00000085393 2328 ntAPPRIS ALT2 TSL 1 (best) BASIC14.13□□□□□ -0.15
Sftpa1P35242 Cdca3-201ENSMUST00000024270 1976 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Sftpa1P35242 Stra8-203ENSMUST00000114999 1455 ntAPPRIS P2 TSL 1 (best) BASIC14.12□□□□□ -0.15
Sftpa1P35242 Ddx51-201ENSMUST00000031478 4846 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Sftpa1P35242 Sh3gl2-203ENSMUST00000107188 2286 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
Sftpa1P35242 Asph-210ENSMUST00000108337 2836 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
Sftpa1P35242 Gnb1-201ENSMUST00000030940 3131 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Sftpa1P35242 Akt2-214ENSMUST00000167435 2865 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Sftpa1P35242 Cnbp-203ENSMUST00000113619 1661 ntAPPRIS P2 TSL 1 (best) BASIC14.12□□□□□ -0.15
Sftpa1P35242 Rbfox2-209ENSMUST00000228087 1694 ntAPPRIS ALT2 BASIC14.12□□□□□ -0.15
Sftpa1P35242 Sept1-201ENSMUST00000106313 1285 ntAPPRIS ALT2 TSL 5 BASIC14.12□□□□□ -0.15
Retrieved 100 of 76,532 protein–RNA pairs in 11.9 ms