Protein–RNA interactions for Protein: P33435

Mmp13, Collagenase 3, mousemouse

Predictions only

Length 472 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Mmp13P33435 Large2-203ENSMUST00000111284 2449 ntAPPRIS ALT2 TSL 5 BASIC15.72■□□□□ 0.11
Mmp13P33435 Gm37728-201ENSMUST00000195025 2292 ntBASIC15.72■□□□□ 0.11
Mmp13P33435 Shmt2-201ENSMUST00000026470 2289 ntAPPRIS P2 TSL 1 (best) BASIC15.72■□□□□ 0.11
Mmp13P33435 Edem3-202ENSMUST00000187951 3115 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
Mmp13P33435 Rbmx-206ENSMUST00000143310 1296 ntTSL 5 BASIC15.72■□□□□ 0.11
Mmp13P33435 Psma3-204ENSMUST00000160864 859 ntTSL 5 BASIC15.72■□□□□ 0.11
Mmp13P33435 Gm27867-201ENSMUST00000184778 125 ntBASIC15.72■□□□□ 0.11
Mmp13P33435 Gm43347-201ENSMUST00000200226 580 ntBASIC15.72■□□□□ 0.11
Mmp13P33435 Arhgap33-206ENSMUST00000208522 781 ntTSL 3 BASIC15.72■□□□□ 0.11
Mmp13P33435 Dnajb8-201ENSMUST00000061866 990 ntAPPRIS P1 BASIC15.72■□□□□ 0.11
Mmp13P33435 Cmtm7-202ENSMUST00000084867 874 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
Mmp13P33435 Btbd3-202ENSMUST00000091556 4657 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Mmp13P33435 Mindy1-212ENSMUST00000168223 1812 ntTSL 5 BASIC15.72■□□□□ 0.11
Mmp13P33435 Rbm42-202ENSMUST00000108141 1526 ntAPPRIS ALT2 TSL 5 BASIC15.72■□□□□ 0.11
Mmp13P33435 Kdm3a-201ENSMUST00000065509 4816 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Mmp13P33435 Ybx2-202ENSMUST00000108601 1351 ntAPPRIS ALT2 TSL 1 (best) BASIC15.72■□□□□ 0.11
Mmp13P33435 H2afy2-201ENSMUST00000020283 2175 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Mmp13P33435 Dnm1l-203ENSMUST00000115749 4068 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
Mmp13P33435 Dnm1l-202ENSMUST00000096229 4056 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
Mmp13P33435 Pogk-204ENSMUST00000135673 2433 ntAPPRIS ALT2 TSL 1 (best) BASIC15.72■□□□□ 0.11
Mmp13P33435 Vps72-201ENSMUST00000009102 1456 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Mmp13P33435 Abhd15-201ENSMUST00000094004 2662 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Mmp13P33435 Zfp423-202ENSMUST00000109655 4907 ntAPPRIS P2 TSL 1 (best) BASIC15.71■□□□□ 0.11
Mmp13P33435 Slc25a3-206ENSMUST00000170810 1341 ntAPPRIS ALT2 TSL 5 BASIC15.71■□□□□ 0.11
Mmp13P33435 Wfikkn1-201ENSMUST00000095487 1981 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Mmp13P33435 Rab17-204ENSMUST00000131428 1557 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Mmp13P33435 Zbtb14-203ENSMUST00000112676 3909 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Mmp13P33435 Hnf4a-201ENSMUST00000018094 4356 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Mmp13P33435 Msl2-201ENSMUST00000085177 4889 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Mmp13P33435 Dzip3-201ENSMUST00000114516 3331 ntAPPRIS P3 TSL 1 (best) BASIC15.71■□□□□ 0.11
Mmp13P33435 Ccl27a-202ENSMUST00000108032 350 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
Mmp13P33435 C030037D09Rik-202ENSMUST00000136201 1216 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
Mmp13P33435 Edf1-201ENSMUST00000015236 722 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Mmp13P33435 Gm26871-202ENSMUST00000180774 695 ntTSL 2 BASIC15.71■□□□□ 0.11
Mmp13P33435 Tm4sf5-201ENSMUST00000019063 1000 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Mmp13P33435 Gm34391-201ENSMUST00000203706 907 ntBASIC15.71■□□□□ 0.11
Mmp13P33435 Ephx4-201ENSMUST00000049146 1279 ntAPPRIS P1 TSL 2 BASIC15.71■□□□□ 0.11
Mmp13P33435 Igdcc4-202ENSMUST00000077696 6361 ntAPPRIS ALT2 TSL 5 BASIC15.71■□□□□ 0.11
Mmp13P33435 Cadps2-206ENSMUST00000115361 4571 ntAPPRIS ALT2 TSL 1 (best) BASIC15.71■□□□□ 0.11
Mmp13P33435 Med25-210ENSMUST00000208253 3693 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Mmp13P33435 Nid1-201ENSMUST00000005532 6091 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Mmp13P33435 Tead2-203ENSMUST00000107801 3396 ntAPPRIS P3 TSL 1 (best) BASIC15.71■□□□□ 0.11
Mmp13P33435 Esco1-203ENSMUST00000115864 2148 ntAPPRIS ALT2 TSL 1 (best) BASIC15.71■□□□□ 0.11
Mmp13P33435 Zfp90-201ENSMUST00000034382 2632 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Mmp13P33435 Clcn2-201ENSMUST00000007207 3128 ntAPPRIS P2 TSL 1 (best) BASIC15.71■□□□□ 0.11
Mmp13P33435 Klhl12-202ENSMUST00000112232 3220 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
Mmp13P33435 Sgta-202ENSMUST00000218208 1964 ntAPPRIS ALT1 TSL 1 (best) BASIC15.71■□□□□ 0.1
Mmp13P33435 Ttc13-210ENSMUST00000214828 3301 ntAPPRIS P1 TSL 5 BASIC15.71■□□□□ 0.1
Mmp13P33435 Htr7-205ENSMUST00000166074 3079 ntTSL 5 BASIC15.71■□□□□ 0.1
Mmp13P33435 Fam103a1-201ENSMUST00000042166 1452 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.1
Mmp13P33435 Zfp212-201ENSMUST00000009411 2801 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.1
Mmp13P33435 Ano10-201ENSMUST00000042546 2653 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.1
Mmp13P33435 Hyou1-204ENSMUST00000160902 3374 ntAPPRIS P1 TSL 5 BASIC15.7■□□□□ 0.1
Mmp13P33435 Xpo1-202ENSMUST00000102869 6004 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Mmp13P33435 Eps8l1-201ENSMUST00000086372 2522 ntAPPRIS P2 TSL 1 (best) BASIC15.7■□□□□ 0.1
Mmp13P33435 Hip1r-201ENSMUST00000000939 6735 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Mmp13P33435 Kif17-201ENSMUST00000030539 3453 ntAPPRIS P3 TSL 1 (best) BASIC15.7■□□□□ 0.1
Mmp13P33435 Nov-201ENSMUST00000050027 2869 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Mmp13P33435 Prkcz2-201ENSMUST00000206136 1756 ntBASIC15.7■□□□□ 0.1
Mmp13P33435 Cep63-201ENSMUST00000093791 2696 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
Mmp13P33435 Hdgfl1-201ENSMUST00000055915 1993 ntAPPRIS P1 BASIC15.7■□□□□ 0.1
Mmp13P33435 Hist1h4k-201ENSMUST00000102983 312 ntAPPRIS P1 BASIC15.7■□□□□ 0.1
Mmp13P33435 Gm7507-201ENSMUST00000183053 1008 ntBASIC15.7■□□□□ 0.1
Mmp13P33435 AC153556.1-201ENSMUST00000215135 794 ntTSL 5 BASIC15.7■□□□□ 0.1
Mmp13P33435 Birc2-201ENSMUST00000054878 378 ntBASIC15.7■□□□□ 0.1
Mmp13P33435 Ppt1-202ENSMUST00000097902 1191 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
Mmp13P33435 Sh2b3-204ENSMUST00000122426 2777 ntAPPRIS P3 TSL 1 (best) BASIC15.7■□□□□ 0.1
Mmp13P33435 Ecel1-203ENSMUST00000160810 2898 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Mmp13P33435 Lmcd1-201ENSMUST00000032376 1730 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Mmp13P33435 Pofut1-203ENSMUST00000099192 1385 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
Mmp13P33435 Zfp385a-201ENSMUST00000168828 2291 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Mmp13P33435 Zfp334-201ENSMUST00000103084 8205 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Mmp13P33435 Pak2-201ENSMUST00000023467 5741 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Mmp13P33435 Arvcf-205ENSMUST00000115614 4698 ntAPPRIS ALT2 TSL 1 (best) BASIC15.7■□□□□ 0.1
Mmp13P33435 Arhgef2-223ENSMUST00000176804 3086 ntAPPRIS ALT2 TSL 5 BASIC15.69■□□□□ 0.1
Mmp13P33435 Glis1-202ENSMUST00000106738 2744 ntAPPRIS ALT2 TSL 5 BASIC15.69■□□□□ 0.1
Mmp13P33435 Cyp2ab1-201ENSMUST00000023513 2720 ntTSL 5 BASIC15.69■□□□□ 0.1
Mmp13P33435 Cdh11-201ENSMUST00000075190 5647 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Mmp13P33435 Trmt112-202ENSMUST00000116551 985 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Mmp13P33435 Tmem208-201ENSMUST00000015000 785 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Mmp13P33435 Chd3os-202ENSMUST00000151617 389 ntTSL 3 BASIC15.69■□□□□ 0.1
Mmp13P33435 Syne4-208ENSMUST00000176304 1006 ntAPPRIS ALT2 TSL 5 BASIC15.69■□□□□ 0.1
Mmp13P33435 Nudt14-203ENSMUST00000221497 355 ntTSL 2 BASIC15.69■□□□□ 0.1
Mmp13P33435 Mgarp-201ENSMUST00000038154 1232 ntAPPRIS P2 TSL 1 (best) BASIC15.69■□□□□ 0.1
Mmp13P33435 Fdps-203ENSMUST00000196709 1382 ntAPPRIS P1 TSL 5 BASIC15.69■□□□□ 0.1
Mmp13P33435 Skor1-202ENSMUST00000116613 3591 ntAPPRIS ALT2 TSL 1 (best) BASIC15.69■□□□□ 0.1
Mmp13P33435 Sacm1l-201ENSMUST00000026270 3558 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Mmp13P33435 Loxl4-203ENSMUST00000164786 2617 ntAPPRIS ALT2 TSL 1 (best) BASIC15.69■□□□□ 0.1
Mmp13P33435 Hykk-201ENSMUST00000039742 5110 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Mmp13P33435 Gm37305-201ENSMUST00000195714 4279 ntBASIC15.69■□□□□ 0.1
Mmp13P33435 Impad1-201ENSMUST00000084949 6543 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Mmp13P33435 Fdft1-204ENSMUST00000224625 3698 ntAPPRIS P1 BASIC15.69■□□□□ 0.1
Mmp13P33435 Rbm11-201ENSMUST00000046378 1400 ntAPPRIS P2 TSL 5 BASIC15.68■□□□□ 0.1
Mmp13P33435 Ilvbl-204ENSMUST00000218271 1606 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
Mmp13P33435 2210011K15Rik-201ENSMUST00000190690 1741 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
Mmp13P33435 Mob4-202ENSMUST00000159311 1816 ntTSL 3 BASIC15.68■□□□□ 0.1
Mmp13P33435 Gm26669-201ENSMUST00000181323 1808 ntTSL 5 BASIC15.68■□□□□ 0.1
Mmp13P33435 Fam84b-201ENSMUST00000100635 5565 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Mmp13P33435 Ddc-210ENSMUST00000178704 2018 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Mmp13P33435 Ints10-203ENSMUST00000110241 2322 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
Retrieved 100 of 76,532 protein–RNA pairs in 35.5 ms