Protein–RNA interactions for Protein: P31649

Slc6a13, Sodium- and chloride-dependent GABA transporter 2, mousemouse

Predictions only

Length 602 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Slc6a13P31649 Gm4899-201ENSMUST00000178708 719 ntBASIC15.57■□□□□ 0.08
Slc6a13P31649 Gm27628-201ENSMUST00000184911 107 ntBASIC15.57■□□□□ 0.08
Slc6a13P31649 Stard3nl-208ENSMUST00000200323 1128 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
Slc6a13P31649 Wdyhv1-204ENSMUST00000226955 1094 ntBASIC15.57■□□□□ 0.08
Slc6a13P31649 Timm8a2-201ENSMUST00000045976 913 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Slc6a13P31649 Sh3rf3-205ENSMUST00000153031 5682 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Slc6a13P31649 Trip10-201ENSMUST00000019631 2224 ntAPPRIS ALT2 TSL 1 (best) BASIC15.57■□□□□ 0.08
Slc6a13P31649 Nap1l1-206ENSMUST00000219143 1365 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
Slc6a13P31649 Alg3-201ENSMUST00000045918 1451 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Slc6a13P31649 Barhl1-201ENSMUST00000050776 3666 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Slc6a13P31649 Foxc2-201ENSMUST00000054691 2725 ntAPPRIS P1 BASIC15.57■□□□□ 0.08
Slc6a13P31649 Tcf3-204ENSMUST00000105340 2826 ntAPPRIS ALT2 TSL 1 (best) BASIC15.57■□□□□ 0.08
Slc6a13P31649 Enah-204ENSMUST00000111030 2844 ntAPPRIS ALT2 TSL 1 (best) BASIC15.57■□□□□ 0.08
Slc6a13P31649 Tcf3-202ENSMUST00000020379 2829 ntAPPRIS ALT2 TSL 1 (best) BASIC15.57■□□□□ 0.08
Slc6a13P31649 Gm5184-201ENSMUST00000220417 1702 ntBASIC15.57■□□□□ 0.08
Slc6a13P31649 Kctd8-201ENSMUST00000054095 2859 ntAPPRIS P2 TSL 1 (best) BASIC15.57■□□□□ 0.08
Slc6a13P31649 Tcf3-209ENSMUST00000105345 2950 ntAPPRIS P3 TSL 1 (best) BASIC15.57■□□□□ 0.08
Slc6a13P31649 Zfp800-202ENSMUST00000115320 4311 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Slc6a13P31649 Tbc1d2-202ENSMUST00000107750 1941 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
Slc6a13P31649 Slc30a10-201ENSMUST00000061093 5836 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Slc6a13P31649 4833422C13Rik-201ENSMUST00000099331 2083 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
Slc6a13P31649 Smarcc1-204ENSMUST00000197984 3538 ntAPPRIS ALT2 TSL 1 (best) BASIC15.56■□□□□ 0.08
Slc6a13P31649 Pdzd4-202ENSMUST00000114438 3625 ntAPPRIS ALT2 TSL 1 (best) BASIC15.56■□□□□ 0.08
Slc6a13P31649 Socs4-201ENSMUST00000065562 6877 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Slc6a13P31649 Ttll5-204ENSMUST00000110220 2655 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
Slc6a13P31649 Gm26821-201ENSMUST00000181954 2652 ntTSL 5 BASIC15.56■□□□□ 0.08
Slc6a13P31649 Pde3b-201ENSMUST00000032909 6573 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Slc6a13P31649 Enah-212ENSMUST00000195059 2832 ntAPPRIS ALT2 TSL 1 (best) BASIC15.56■□□□□ 0.08
Slc6a13P31649 Ss18-203ENSMUST00000092041 2997 ntAPPRIS ALT1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Slc6a13P31649 Steap2-202ENSMUST00000115424 3285 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Slc6a13P31649 Steap2-205ENSMUST00000115427 3470 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
Slc6a13P31649 Gm11764-201ENSMUST00000120221 623 ntBASIC15.56■□□□□ 0.08
Slc6a13P31649 4930481B07Rik-201ENSMUST00000128160 1089 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
Slc6a13P31649 0610025J13Rik-201ENSMUST00000131324 652 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
Slc6a13P31649 Ccl27a-217ENSMUST00000155240 343 ntTSL 2 BASIC15.56■□□□□ 0.08
Slc6a13P31649 1810008I18Rik-202ENSMUST00000187848 819 ntTSL 3 BASIC15.56■□□□□ 0.08
Slc6a13P31649 Cela3a-201ENSMUST00000024200 958 ntAPPRIS P1 TSL 5 BASIC15.56■□□□□ 0.08
Slc6a13P31649 Rpl8-201ENSMUST00000004072 862 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Slc6a13P31649 Pdzd4-201ENSMUST00000002080 3970 ntAPPRIS P3 TSL 1 (best) BASIC15.56■□□□□ 0.08
Slc6a13P31649 Hectd3-201ENSMUST00000050067 4583 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Slc6a13P31649 Mindy1-212ENSMUST00000168223 1812 ntTSL 5 BASIC15.56■□□□□ 0.08
Slc6a13P31649 Apoa4-201ENSMUST00000034585 1815 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Slc6a13P31649 Cmtm1-202ENSMUST00000160596 1900 ntAPPRIS ALT2 TSL 5 BASIC15.56■□□□□ 0.08
Slc6a13P31649 Bhlhe41-201ENSMUST00000032386 6133 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Slc6a13P31649 Ppef2-201ENSMUST00000031359 2274 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Slc6a13P31649 Repin1-202ENSMUST00000118229 3138 ntAPPRIS ALT2 TSL 1 (best) BASIC15.56■□□□□ 0.08
Slc6a13P31649 Xpo4-209ENSMUST00000174545 8680 ntAPPRIS P2 TSL 1 (best) BASIC15.56■□□□□ 0.08
Slc6a13P31649 Rptor-201ENSMUST00000026671 6594 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Slc6a13P31649 Slc24a4-202ENSMUST00000159329 4465 ntAPPRIS ALT2 TSL 1 (best) BASIC15.55■□□□□ 0.08
Slc6a13P31649 AC154412.1-201ENSMUST00000226540 2786 ntBASIC15.55■□□□□ 0.08
Slc6a13P31649 Fscn1-201ENSMUST00000031565 2675 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Slc6a13P31649 Gal3st4-202ENSMUST00000161279 2059 ntAPPRIS P3 TSL 3 BASIC15.55■□□□□ 0.08
Slc6a13P31649 Gm38318-201ENSMUST00000195769 1706 ntBASIC15.55■□□□□ 0.08
Slc6a13P31649 Hoga1-201ENSMUST00000081714 1668 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Slc6a13P31649 Dph5-204ENSMUST00000189799 1558 ntAPPRIS P1 TSL 5 BASIC15.55■□□□□ 0.08
Slc6a13P31649 Rabepk-203ENSMUST00000118108 1431 ntAPPRIS P1 TSL 5 BASIC15.55■□□□□ 0.08
Slc6a13P31649 Mef2b-203ENSMUST00000110143 1312 ntAPPRIS ALT2 TSL 1 (best) BASIC15.55■□□□□ 0.08
Slc6a13P31649 Marveld3-201ENSMUST00000001722 1330 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
Slc6a13P31649 Arl4a-201ENSMUST00000101472 1200 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Slc6a13P31649 Ndufs7-202ENSMUST00000105364 983 ntAPPRIS P1 TSL 5 BASIC15.55■□□□□ 0.08
Slc6a13P31649 Rplp2-203ENSMUST00000106004 421 ntAPPRIS P1 TSL 2 BASIC15.55■□□□□ 0.08
Slc6a13P31649 Gm11453-201ENSMUST00000117318 1007 ntBASIC15.55■□□□□ 0.08
Slc6a13P31649 Hmgb1-208ENSMUST00000139443 923 ntTSL 2 BASIC15.55■□□□□ 0.08
Slc6a13P31649 Washc3-202ENSMUST00000171151 837 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
Slc6a13P31649 H2-T-ps-201ENSMUST00000172538 1067 ntBASIC15.55■□□□□ 0.08
Slc6a13P31649 Gm7556-201ENSMUST00000201178 1084 ntBASIC15.55■□□□□ 0.08
Slc6a13P31649 Pih1d1-206ENSMUST00000210139 1077 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Slc6a13P31649 AC138767.1-201ENSMUST00000222661 415 ntBASIC15.55■□□□□ 0.08
Slc6a13P31649 Lce3c-201ENSMUST00000055375 567 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Slc6a13P31649 Grin3b-201ENSMUST00000045085 3283 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Slc6a13P31649 Zfp362-201ENSMUST00000071108 2674 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Slc6a13P31649 Axin1-201ENSMUST00000074370 3777 ntAPPRIS P3 TSL 1 (best) BASIC15.55■□□□□ 0.08
Slc6a13P31649 Pcbp3-201ENSMUST00000001148 2013 ntAPPRIS P3 TSL 1 (best) BASIC15.55■□□□□ 0.08
Slc6a13P31649 Galt-202ENSMUST00000108038 1859 ntAPPRIS ALT2 TSL 2 BASIC15.54■□□□□ 0.08
Slc6a13P31649 Chpf-202ENSMUST00000094818 3065 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
Slc6a13P31649 Urgcp-206ENSMUST00000170116 5528 ntAPPRIS ALT2 TSL 5 BASIC15.54■□□□□ 0.08
Slc6a13P31649 Oas1b-203ENSMUST00000183291 1837 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Slc6a13P31649 Gm45293-201ENSMUST00000209754 1812 ntBASIC15.54■□□□□ 0.08
Slc6a13P31649 Lmnb1-201ENSMUST00000025486 2843 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Slc6a13P31649 Gm29340-201ENSMUST00000188763 3854 ntBASIC15.54■□□□□ 0.08
Slc6a13P31649 Gm7901-201ENSMUST00000120430 1597 ntBASIC15.54■□□□□ 0.08
Slc6a13P31649 Cnot7-206ENSMUST00000135269 2461 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
Slc6a13P31649 AC157650.3-201ENSMUST00000225058 1476 ntBASIC15.54■□□□□ 0.08
Slc6a13P31649 Cnksr3-201ENSMUST00000015346 3447 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Slc6a13P31649 A230072C01Rik-202ENSMUST00000136447 1412 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
Slc6a13P31649 Rab3a-201ENSMUST00000034301 1363 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Slc6a13P31649 Ccdc88a-201ENSMUST00000040182 9376 ntAPPRIS P1 TSL 5 BASIC15.54■□□□□ 0.08
Slc6a13P31649 Gm43352-201ENSMUST00000196419 3065 ntBASIC15.54■□□□□ 0.08
Slc6a13P31649 Nkain4-202ENSMUST00000108873 865 ntAPPRIS ALT2 TSL 1 (best) BASIC15.54■□□□□ 0.08
Slc6a13P31649 Esco1-203ENSMUST00000115864 2148 ntAPPRIS ALT2 TSL 1 (best) BASIC15.54■□□□□ 0.08
Slc6a13P31649 Gsdmcl2-204ENSMUST00000186026 736 ntBASIC15.54■□□□□ 0.08
Slc6a13P31649 Gsdmcl1-202ENSMUST00000190937 735 ntBASIC15.54■□□□□ 0.08
Slc6a13P31649 Batf-201ENSMUST00000040536 955 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Slc6a13P31649 Sec24a-203ENSMUST00000109092 2094 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
Slc6a13P31649 Kcna6-204ENSMUST00000185333 5836 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Slc6a13P31649 Ccdc181-201ENSMUST00000027867 1909 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Slc6a13P31649 Mapk8ip3-201ENSMUST00000088345 5543 ntAPPRIS P3 TSL 1 (best) BASIC15.54■□□□□ 0.08
Slc6a13P31649 Siglece-201ENSMUST00000032667 1849 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Slc6a13P31649 Gm37711-201ENSMUST00000194907 1749 ntTSL 5 BASIC15.54■□□□□ 0.08
Slc6a13P31649 Ankrd13a-201ENSMUST00000102578 3717 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Retrieved 100 of 76,532 protein–RNA pairs in 38 ms