Protein–RNA interactions for Protein: P28660

Nckap1, Nck-associated protein 1, mousemouse

Known RBP Predictions only

Length 1,128 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nckap1P28660 Zfp316-202ENSMUST00000161448 6891 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Nckap1P28660 Disc1-206ENSMUST00000118942 2860 ntAPPRIS ALT2 TSL 1 (best) BASIC15.26■□□□□ 0.03
Nckap1P28660 Sumo3-204ENSMUST00000129492 487 ntAPPRIS ALT2 TSL 2 BASIC15.26■□□□□ 0.03
Nckap1P28660 Gm15706-201ENSMUST00000139612 899 ntTSL 2 BASIC15.26■□□□□ 0.03
Nckap1P28660 Tmem33-206ENSMUST00000162543 664 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
Nckap1P28660 Gm8318-201ENSMUST00000182954 872 ntBASIC15.26■□□□□ 0.03
Nckap1P28660 Gm17968-201ENSMUST00000194902 784 ntBASIC15.26■□□□□ 0.03
Nckap1P28660 Elof1-203ENSMUST00000213233 810 ntAPPRIS P1 TSL 3 BASIC15.26■□□□□ 0.03
Nckap1P28660 Gm34397-203ENSMUST00000214991 630 ntTSL 5 BASIC15.26■□□□□ 0.03
Nckap1P28660 9430081H08Rik-201ENSMUST00000217460 818 ntBASIC15.26■□□□□ 0.03
Nckap1P28660 AC124549.3-201ENSMUST00000225541 367 ntBASIC15.26■□□□□ 0.03
Nckap1P28660 Cyp2d40-201ENSMUST00000055721 1161 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Nckap1P28660 Ttc13-202ENSMUST00000117624 3096 ntTSL 5 BASIC15.26■□□□□ 0.03
Nckap1P28660 Ddit4l-201ENSMUST00000053855 2722 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Nckap1P28660 Slc12a5-207ENSMUST00000202223 5690 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
Nckap1P28660 Tfap2d-201ENSMUST00000037294 1761 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Nckap1P28660 Papola-202ENSMUST00000109901 4380 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Nckap1P28660 Crtc3-201ENSMUST00000122255 5115 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Nckap1P28660 Pycrl-201ENSMUST00000053918 1353 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Nckap1P28660 Usp30-201ENSMUST00000031588 4604 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Nckap1P28660 Sfn-201ENSMUST00000057311 1613 ntAPPRIS P1 BASIC15.25■□□□□ 0.03
Nckap1P28660 Gdpd2-202ENSMUST00000113744 2427 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Nckap1P28660 Glis1-201ENSMUST00000046005 2906 ntAPPRIS P2 TSL 1 (best) BASIC15.25■□□□□ 0.03
Nckap1P28660 Psmb10-201ENSMUST00000034369 1311 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Nckap1P28660 Rap1gap-202ENSMUST00000097837 3168 ntAPPRIS ALT2 TSL 1 (best) BASIC15.25■□□□□ 0.03
Nckap1P28660 Papolb-201ENSMUST00000099400 4239 ntAPPRIS P1 BASIC15.25■□□□□ 0.03
Nckap1P28660 Sybu-202ENSMUST00000110267 3127 ntAPPRIS ALT2 TSL 1 (best) BASIC15.25■□□□□ 0.03
Nckap1P28660 Txndc11-201ENSMUST00000038424 3095 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Nckap1P28660 Lyrm1-203ENSMUST00000106517 1279 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Nckap1P28660 Gm14701-201ENSMUST00000117156 348 ntBASIC15.25■□□□□ 0.03
Nckap1P28660 Erdr1-202ENSMUST00000177671 708 ntAPPRIS ALT2 TSL 5 BASIC15.25■□□□□ 0.03
Nckap1P28660 Gm5177-201ENSMUST00000183092 997 ntBASIC15.25■□□□□ 0.03
Nckap1P28660 Gm27494-201ENSMUST00000184735 189 ntBASIC15.25■□□□□ 0.03
Nckap1P28660 Gm44662-201ENSMUST00000206970 412 ntTSL 5 BASIC15.25■□□□□ 0.03
Nckap1P28660 Prkcz2-201ENSMUST00000206136 1756 ntBASIC15.25■□□□□ 0.03
Nckap1P28660 Mvd-201ENSMUST00000006692 1756 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Nckap1P28660 Etnk2-203ENSMUST00000135222 2297 ntAPPRIS P2 TSL 1 (best) BASIC15.25■□□□□ 0.03
Nckap1P28660 Pfkfb4-203ENSMUST00000198140 3488 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Nckap1P28660 Lactbl1-201ENSMUST00000178843 2954 ntAPPRIS P1 TSL 5 BASIC15.25■□□□□ 0.03
Nckap1P28660 Per1-201ENSMUST00000021271 4671 ntAPPRIS P2 TSL 1 (best) BASIC15.25■□□□□ 0.03
Nckap1P28660 Snn-201ENSMUST00000089011 2902 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Nckap1P28660 Hps6-201ENSMUST00000099393 2696 ntAPPRIS P1 BASIC15.25■□□□□ 0.03
Nckap1P28660 Zfp800-202ENSMUST00000115320 4311 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Nckap1P28660 Gm43072-201ENSMUST00000200283 1671 ntBASIC15.25■□□□□ 0.03
Nckap1P28660 Kank2-201ENSMUST00000034717 5040 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Nckap1P28660 Ube2d2b-201ENSMUST00000072578 1678 ntAPPRIS P1 BASIC15.25■□□□□ 0.03
Nckap1P28660 Rps6kb2-202ENSMUST00000118483 1409 ntTSL 5 BASIC15.25■□□□□ 0.03
Nckap1P28660 Klrg1-201ENSMUST00000032207 1414 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Nckap1P28660 Mycs-201ENSMUST00000058404 2368 ntAPPRIS P1 BASIC15.25■□□□□ 0.03
Nckap1P28660 Smarca5-201ENSMUST00000043359 6113 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Nckap1P28660 Slc39a14-201ENSMUST00000022688 2098 ntAPPRIS ALT2 TSL 1 (best) BASIC15.24■□□□□ 0.03
Nckap1P28660 Atxn7l3-201ENSMUST00000073234 3688 ntAPPRIS ALT1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Nckap1P28660 Susd6-201ENSMUST00000068519 4977 ntAPPRIS P2 TSL 1 (best) BASIC15.24■□□□□ 0.03
Nckap1P28660 Wrb-201ENSMUST00000023913 2495 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Nckap1P28660 Faf1-201ENSMUST00000102724 4468 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Nckap1P28660 AC119177.1-201ENSMUST00000227647 1332 ntBASIC15.24■□□□□ 0.03
Nckap1P28660 Gm8281-202ENSMUST00000163719 1954 ntAPPRIS P1 TSL 5 BASIC15.24■□□□□ 0.03
Nckap1P28660 Shh-201ENSMUST00000002708 2847 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Nckap1P28660 Ofd1-201ENSMUST00000049501 4453 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Nckap1P28660 Tex261-201ENSMUST00000014892 2984 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Nckap1P28660 Crygn-201ENSMUST00000047119 768 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Nckap1P28660 Gapdh-201ENSMUST00000073605 1272 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Nckap1P28660 Samm50-201ENSMUST00000023071 1673 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Nckap1P28660 Capn10-201ENSMUST00000027488 2902 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Nckap1P28660 Tacc1-202ENSMUST00000084512 6471 ntAPPRIS ALT2 TSL 1 (best) BASIC15.24■□□□□ 0.03
Nckap1P28660 Mapk8ip2-201ENSMUST00000023291 5558 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Nckap1P28660 Kctd8-201ENSMUST00000054095 2859 ntAPPRIS P2 TSL 1 (best) BASIC15.24■□□□□ 0.03
Nckap1P28660 4933436I20Rik-201ENSMUST00000189405 1434 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
Nckap1P28660 Slc39a7-201ENSMUST00000025186 2244 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Nckap1P28660 Npr3-201ENSMUST00000066529 6892 ntAPPRIS P2 TSL 1 (best) BASIC15.24■□□□□ 0.03
Nckap1P28660 Pde4d-207ENSMUST00000120664 4207 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
Nckap1P28660 Ube2o-201ENSMUST00000082152 5205 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Nckap1P28660 Gm13337-201ENSMUST00000119183 1594 ntBASIC15.24■□□□□ 0.03
Nckap1P28660 Anxa3-201ENSMUST00000031447 1595 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Nckap1P28660 Pou2f2-209ENSMUST00000175774 7047 ntAPPRIS ALT2 TSL 1 (best) BASIC15.23■□□□□ 0.03
Nckap1P28660 Ikbke-204ENSMUST00000161764 2867 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
Nckap1P28660 Fam83f-201ENSMUST00000023044 2988 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Nckap1P28660 9530018F02Rik-201ENSMUST00000219513 2599 ntBASIC15.23■□□□□ 0.03
Nckap1P28660 Taf5l-201ENSMUST00000093039 2912 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Nckap1P28660 Ern1-202ENSMUST00000106799 660 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
Nckap1P28660 Gm15427-201ENSMUST00000117288 531 ntBASIC15.23■□□□□ 0.03
Nckap1P28660 Rpl18-ps1-201ENSMUST00000121555 525 ntBASIC15.23■□□□□ 0.03
Nckap1P28660 Fhad1os2-201ENSMUST00000152351 945 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
Nckap1P28660 Gm15406-202ENSMUST00000202229 767 ntTSL 2 BASIC15.23■□□□□ 0.03
Nckap1P28660 Thap2-203ENSMUST00000218989 527 ntBASIC15.23■□□□□ 0.03
Nckap1P28660 AC160980.1-201ENSMUST00000224136 970 ntBASIC15.23■□□□□ 0.03
Nckap1P28660 3110079O15Rik-201ENSMUST00000027476 478 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Nckap1P28660 Pmf1-201ENSMUST00000056370 1007 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Nckap1P28660 Chchd10-201ENSMUST00000058906 939 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Nckap1P28660 Prss48-201ENSMUST00000061343 949 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Nckap1P28660 G3bp2-204ENSMUST00000169094 2716 ntAPPRIS P3 TSL 1 (best) BASIC15.23■□□□□ 0.03
Nckap1P28660 Taok3-202ENSMUST00000111975 2172 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
Nckap1P28660 Cfap69-205ENSMUST00000135252 2188 ntAPPRIS ALT2 TSL 1 (best) BASIC15.23■□□□□ 0.03
Nckap1P28660 Ccdc68-201ENSMUST00000043929 1618 ntAPPRIS P2 TSL 1 (best) BASIC15.23■□□□□ 0.03
Nckap1P28660 Alpl-201ENSMUST00000030551 2522 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Nckap1P28660 Map2k5-201ENSMUST00000034920 2310 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Nckap1P28660 Susd3-202ENSMUST00000058196 1418 ntAPPRIS P3 TSL 1 (best) BASIC15.23■□□□□ 0.03
Nckap1P28660 Arid3c-201ENSMUST00000084698 1417 ntAPPRIS P3 TSL 1 (best) BASIC15.23■□□□□ 0.03
Nckap1P28660 Rd3-203ENSMUST00000181512 1760 ntTSL 5 BASIC15.23■□□□□ 0.03
Nckap1P28660 Mios-201ENSMUST00000040017 3710 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Retrieved 100 of 76,532 protein–RNA pairs in 27.4 ms