Protein–RNA interactions for Protein: P25318

Col8a2, Collagen alpha-2(VIII) chain, mousemouse

Predictions only

Length 699 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col8a2P25318 Gm18246-201ENSMUST00000221023 728 ntBASIC12.81□□□□□ -0.36
Col8a2P25318 Acvrl1-204ENSMUST00000120028 1932 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Col8a2P25318 1700066M21Rik-201ENSMUST00000042734 3008 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Col8a2P25318 Agfg1-201ENSMUST00000063380 2896 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Col8a2P25318 Chpf-201ENSMUST00000079205 2892 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Col8a2P25318 Thsd7a-202ENSMUST00000119581 5678 ntAPPRIS P2 TSL 5 BASIC12.81□□□□□ -0.36
Col8a2P25318 Nap1l4-209ENSMUST00000209098 2281 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Col8a2P25318 Trappc10-201ENSMUST00000000384 5047 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Col8a2P25318 Syne4-201ENSMUST00000054594 1355 ntAPPRIS P3 TSL 1 (best) BASIC12.81□□□□□ -0.36
Col8a2P25318 Krt90-201ENSMUST00000023714 2534 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Col8a2P25318 Tmem161a-214ENSMUST00000182980 2080 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Col8a2P25318 Atp6v0d1-201ENSMUST00000013304 1629 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Col8a2P25318 Zkscan3-201ENSMUST00000070785 2561 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Col8a2P25318 A230060F14Rik-202ENSMUST00000190739 1889 ntBASIC12.8□□□□□ -0.36
Col8a2P25318 Svip-201ENSMUST00000098414 3053 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Col8a2P25318 Fbxw11-203ENSMUST00000109366 3821 ntAPPRIS ALT1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Col8a2P25318 Slc9a3r1-201ENSMUST00000021077 1925 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Col8a2P25318 Cdh2-201ENSMUST00000025166 4843 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Col8a2P25318 Cuedc1-201ENSMUST00000018522 3180 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Col8a2P25318 Nxnl1-202ENSMUST00000163659 2730 ntAPPRIS P1 TSL 2 BASIC12.8□□□□□ -0.36
Col8a2P25318 Mtcl1-202ENSMUST00000097291 7274 ntAPPRIS ALT2 TSL 1 (best) BASIC12.8□□□□□ -0.36
Col8a2P25318 Terf1-203ENSMUST00000188371 2268 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Col8a2P25318 Rhox2h-201ENSMUST00000115162 779 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Col8a2P25318 Slc38a6-204ENSMUST00000126488 589 ntTSL 5 BASIC12.8□□□□□ -0.36
Col8a2P25318 Gm19710-202ENSMUST00000200320 493 ntTSL 3 BASIC12.8□□□□□ -0.36
Col8a2P25318 Smim4-204ENSMUST00000203261 1219 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Col8a2P25318 CT943659.1-201ENSMUST00000215459 326 ntBASIC12.8□□□□□ -0.36
Col8a2P25318 Gchfr-201ENSMUST00000057454 645 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Col8a2P25318 Prss48-201ENSMUST00000061343 949 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Col8a2P25318 Cdkn2d-201ENSMUST00000086374 1264 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Col8a2P25318 Stk40-202ENSMUST00000116286 3860 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Col8a2P25318 Klc4-201ENSMUST00000003642 2322 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Col8a2P25318 Bnip2-202ENSMUST00000085393 2328 ntAPPRIS ALT2 TSL 1 (best) BASIC12.8□□□□□ -0.36
Col8a2P25318 Dsn1-201ENSMUST00000103129 2080 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Col8a2P25318 Gfm2-211ENSMUST00000161913 1829 ntTSL 2 BASIC12.8□□□□□ -0.36
Col8a2P25318 Snx8-201ENSMUST00000031539 2627 ntAPPRIS P2 TSL 1 (best) BASIC12.8□□□□□ -0.36
Col8a2P25318 Tm9sf1-204ENSMUST00000121937 2398 ntTSL 5 BASIC12.8□□□□□ -0.36
Col8a2P25318 Sfxn4-203ENSMUST00000135808 1309 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Col8a2P25318 Slc4a1ap-206ENSMUST00000201858 2109 ntAPPRIS ALT2 TSL 1 (best) BASIC12.8□□□□□ -0.36
Col8a2P25318 Slc44a5-201ENSMUST00000089948 4098 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Col8a2P25318 Tmod2-208ENSMUST00000215614 1921 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Col8a2P25318 Sacm1l-201ENSMUST00000026270 3558 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Col8a2P25318 Irf7-201ENSMUST00000026571 1916 ntAPPRIS P3 TSL 1 (best) BASIC12.8□□□□□ -0.36
Col8a2P25318 Mael-202ENSMUST00000194057 1691 ntTSL 5 BASIC12.8□□□□□ -0.36
Col8a2P25318 AC130669.1-201ENSMUST00000228537 1672 ntBASIC12.8□□□□□ -0.36
Col8a2P25318 Klrg1-201ENSMUST00000032207 1414 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Col8a2P25318 Dnase2a-201ENSMUST00000003910 1715 ntAPPRIS P2 TSL 1 (best) BASIC12.79□□□□□ -0.36
Col8a2P25318 Axin1-201ENSMUST00000074370 3777 ntAPPRIS P3 TSL 1 (best) BASIC12.79□□□□□ -0.36
Col8a2P25318 Islr2-202ENSMUST00000163200 4123 ntAPPRIS ALT2 TSL 1 (best) BASIC12.79□□□□□ -0.36
Col8a2P25318 Snx27-201ENSMUST00000029783 6261 ntAPPRIS ALT1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Col8a2P25318 Rgs9-201ENSMUST00000020920 2434 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Col8a2P25318 B4galt2-203ENSMUST00000106421 1801 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Col8a2P25318 Pdhb-201ENSMUST00000022268 1513 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Col8a2P25318 Lhx3-202ENSMUST00000054099 2184 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Col8a2P25318 Emp2-201ENSMUST00000078357 3440 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Col8a2P25318 Wdr90-205ENSMUST00000176923 5666 ntAPPRIS ALT2 TSL 5 BASIC12.79□□□□□ -0.36
Col8a2P25318 Commd6-201ENSMUST00000100339 1090 ntAPPRIS P3 TSL 1 (best) BASIC12.79□□□□□ -0.36
Col8a2P25318 Rpl13-ps5-201ENSMUST00000117813 630 ntBASIC12.79□□□□□ -0.36
Col8a2P25318 Gm14321-202ENSMUST00000139927 351 ntTSL 5 BASIC12.79□□□□□ -0.36
Col8a2P25318 1700108N11Rik-201ENSMUST00000153051 917 ntTSL 2 BASIC12.79□□□□□ -0.36
Col8a2P25318 Faap20-210ENSMUST00000178473 1076 ntAPPRIS P3 TSL 1 (best) BASIC12.79□□□□□ -0.36
Col8a2P25318 A430093F15Rik-205ENSMUST00000188480 509 ntTSL 3 BASIC12.79□□□□□ -0.36
Col8a2P25318 Gm37935-201ENSMUST00000192012 982 ntBASIC12.79□□□□□ -0.36
Col8a2P25318 Gm44492-201ENSMUST00000197012 141 ntBASIC12.79□□□□□ -0.36
Col8a2P25318 Gnmt-201ENSMUST00000002846 1035 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Col8a2P25318 Timm10b-201ENSMUST00000058333 694 ntAPPRIS P2 TSL 1 (best) BASIC12.79□□□□□ -0.36
Col8a2P25318 A830031A19Rik-201ENSMUST00000068360 757 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Col8a2P25318 Crb3-201ENSMUST00000071826 1194 ntAPPRIS P3 TSL 3 BASIC12.79□□□□□ -0.36
Col8a2P25318 AL691505.1-201ENSMUST00000219965 1618 ntTSL 5 BASIC12.79□□□□□ -0.36
Col8a2P25318 Fam219a-201ENSMUST00000108049 3296 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Col8a2P25318 Mpped1-201ENSMUST00000046168 3265 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Col8a2P25318 Gm8281-202ENSMUST00000163719 1954 ntAPPRIS P1 TSL 5 BASIC12.79□□□□□ -0.36
Col8a2P25318 Gna15-201ENSMUST00000043709 1962 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Col8a2P25318 Wfikkn1-201ENSMUST00000095487 1981 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Col8a2P25318 Abat-202ENSMUST00000115838 1348 ntTSL 2 BASIC12.79□□□□□ -0.36
Col8a2P25318 AC119177.1-201ENSMUST00000227647 1332 ntBASIC12.79□□□□□ -0.36
Col8a2P25318 Ssu2-201ENSMUST00000060847 1321 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Col8a2P25318 Fbxl5-207ENSMUST00000124610 2306 ntTSL 5 BASIC12.79□□□□□ -0.36
Col8a2P25318 Slc8b1-202ENSMUST00000076051 2661 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Col8a2P25318 Wdr91-201ENSMUST00000081214 2682 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Col8a2P25318 Unc13b-201ENSMUST00000079978 6354 ntAPPRIS P2 TSL 5 BASIC12.79□□□□□ -0.36
Col8a2P25318 Fbxl19-201ENSMUST00000033081 3410 ntAPPRIS P2 TSL 1 (best) BASIC12.79□□□□□ -0.36
Col8a2P25318 Cxcl10-202ENSMUST00000118006 1353 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Col8a2P25318 Nsd3-207ENSMUST00000143445 2416 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Col8a2P25318 Zbtb7c-201ENSMUST00000058997 4569 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Col8a2P25318 Zfp786-201ENSMUST00000058844 3191 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Col8a2P25318 Fa2h-201ENSMUST00000038475 2492 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Col8a2P25318 Fam110a-201ENSMUST00000062047 1754 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Col8a2P25318 Mis12-206ENSMUST00000164220 1416 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Col8a2P25318 Rcbtb1-201ENSMUST00000022551 3957 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Col8a2P25318 Syp-201ENSMUST00000069520 2591 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Col8a2P25318 Mapt-202ENSMUST00000106988 2202 ntAPPRIS ALT2 TSL 5 BASIC12.78□□□□□ -0.36
Col8a2P25318 D630044L22Rik-201ENSMUST00000181174 2964 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Col8a2P25318 1600014C10Rik-208ENSMUST00000179525 2326 ntTSL 2 BASIC12.78□□□□□ -0.36
Col8a2P25318 Cadps2-204ENSMUST00000115356 3533 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Col8a2P25318 Rab17-204ENSMUST00000131428 1557 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Col8a2P25318 Ddc-202ENSMUST00000109659 1954 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Col8a2P25318 Sybu-209ENSMUST00000228639 4113 ntBASIC12.78□□□□□ -0.36
Col8a2P25318 Bad-203ENSMUST00000113426 740 ntTSL 5 BASIC12.78□□□□□ -0.36
Col8a2P25318 Meig1-203ENSMUST00000115082 603 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Retrieved 100 of 76,532 protein–RNA pairs in 25.9 ms