Protein–RNA interactions for Protein: P23440

Pde6b, Rod cGMP-specific 3',5'-cyclic phosphodiesterase subunit beta, mousemouse

Predictions only

Length 856 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pde6bP23440 Fbxo9-202ENSMUST00000085311 2155 ntAPPRIS ALT1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Pde6bP23440 Ckap4-201ENSMUST00000053871 3089 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Pde6bP23440 Senp7-211ENSMUST00000202000 3218 ntTSL 2 BASIC16.76■□□□□ 0.27
Pde6bP23440 Tdrd7-201ENSMUST00000102929 3716 ntAPPRIS P3 TSL 1 (best) BASIC16.76■□□□□ 0.27
Pde6bP23440 Strn4-201ENSMUST00000019220 3535 ntAPPRIS P4 TSL 1 (best) BASIC16.76■□□□□ 0.27
Pde6bP23440 2810474O19Rik-209ENSMUST00000189932 5269 ntAPPRIS P2 TSL 1 (best) BASIC16.76■□□□□ 0.27
Pde6bP23440 Cpq-201ENSMUST00000042167 1923 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Pde6bP23440 Trappc10-201ENSMUST00000000384 5047 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Pde6bP23440 Zdhhc15-201ENSMUST00000042070 5509 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Pde6bP23440 Clvs2-201ENSMUST00000019920 2717 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Pde6bP23440 Dlgap1-201ENSMUST00000060072 5420 ntAPPRIS ALT2 TSL 1 (best) BASIC16.75■□□□□ 0.27
Pde6bP23440 Ppfia3-207ENSMUST00000211067 4565 ntAPPRIS P1 TSL 5 BASIC16.75■□□□□ 0.27
Pde6bP23440 Gm5366-201ENSMUST00000215494 1338 ntBASIC16.75■□□□□ 0.27
Pde6bP23440 Prss22-201ENSMUST00000041649 1323 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Pde6bP23440 Plcxd1-201ENSMUST00000086687 1346 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Pde6bP23440 Clvs2-203ENSMUST00000160299 2610 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
Pde6bP23440 Gm9867-201ENSMUST00000192212 2647 ntBASIC16.75■□□□□ 0.27
Pde6bP23440 Wnt10b-206ENSMUST00000228546 2709 ntBASIC16.75■□□□□ 0.27
Pde6bP23440 Commd5-202ENSMUST00000109793 920 ntAPPRIS P1 TSL 5 BASIC16.75■□□□□ 0.27
Pde6bP23440 Gm28308-201ENSMUST00000128102 752 ntAPPRIS P1 TSL 3 BASIC16.75■□□□□ 0.27
Pde6bP23440 Rps2-ps5-201ENSMUST00000184266 849 ntBASIC16.75■□□□□ 0.27
Pde6bP23440 Thap4-205ENSMUST00000189728 713 ntTSL 2 BASIC16.75■□□□□ 0.27
Pde6bP23440 Tma7-203ENSMUST00000192801 386 ntTSL 3 BASIC16.75■□□□□ 0.27
Pde6bP23440 Elof1-203ENSMUST00000213233 810 ntAPPRIS P1 TSL 3 BASIC16.75■□□□□ 0.27
Pde6bP23440 Zfp706-204ENSMUST00000226671 447 ntAPPRIS P1 BASIC16.75■□□□□ 0.27
Pde6bP23440 Emg1-201ENSMUST00000004379 1034 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Pde6bP23440 2210406O10Rik-201ENSMUST00000044964 937 ntTSL 5 BASIC16.75■□□□□ 0.27
Pde6bP23440 Gchfr-201ENSMUST00000057454 645 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Pde6bP23440 Ubap1-202ENSMUST00000108060 2514 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
Pde6bP23440 Dph5-204ENSMUST00000189799 1558 ntAPPRIS P1 TSL 5 BASIC16.75■□□□□ 0.27
Pde6bP23440 Arl5c-201ENSMUST00000042971 1571 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Pde6bP23440 Zfp42-202ENSMUST00000209356 1744 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Pde6bP23440 Myef2-201ENSMUST00000067780 2999 ntAPPRIS ALT2 TSL 5 BASIC16.75■□□□□ 0.27
Pde6bP23440 Msi1-208ENSMUST00000150779 3133 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Pde6bP23440 Fam103a1-202ENSMUST00000118190 1391 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Pde6bP23440 Rhd-201ENSMUST00000030627 1514 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Pde6bP23440 Ecel1-203ENSMUST00000160810 2898 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Pde6bP23440 Stk40-202ENSMUST00000116286 3860 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
Pde6bP23440 Pxn-201ENSMUST00000067268 3706 ntAPPRIS P3 TSL 1 (best) BASIC16.74■□□□□ 0.27
Pde6bP23440 Specc1-210ENSMUST00000201723 2690 ntTSL 5 BASIC16.74■□□□□ 0.27
Pde6bP23440 Fdft1-204ENSMUST00000224625 3698 ntAPPRIS P1 BASIC16.74■□□□□ 0.27
Pde6bP23440 Strn4-202ENSMUST00000108495 3082 ntAPPRIS ALT2 TSL 1 (best) BASIC16.74■□□□□ 0.27
Pde6bP23440 Bmp8b-201ENSMUST00000002457 2940 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Pde6bP23440 Tbrg4-212ENSMUST00000189268 2347 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Pde6bP23440 AC131104.1-201ENSMUST00000222118 1739 ntTSL 5 BASIC16.74■□□□□ 0.27
Pde6bP23440 Endov-203ENSMUST00000106245 5126 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
Pde6bP23440 Gm16151-201ENSMUST00000129696 639 ntTSL 3 BASIC16.74■□□□□ 0.27
Pde6bP23440 Gm37335-201ENSMUST00000192656 447 ntTSL 5 BASIC16.74■□□□□ 0.27
Pde6bP23440 Nxnl2-201ENSMUST00000021828 1167 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Pde6bP23440 Ccdc182-201ENSMUST00000037268 1204 ntAPPRIS P1 BASIC16.74■□□□□ 0.27
Pde6bP23440 Snrnp25-201ENSMUST00000039601 821 ntAPPRIS P2 TSL 1 (best) BASIC16.74■□□□□ 0.27
Pde6bP23440 Ly6d-201ENSMUST00000040404 744 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Pde6bP23440 Phyhip-201ENSMUST00000003561 2838 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Pde6bP23440 Kank1-201ENSMUST00000049400 5637 ntAPPRIS P1 TSL 5 BASIC16.74■□□□□ 0.27
Pde6bP23440 Cygb-201ENSMUST00000021166 2331 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Pde6bP23440 Camkv-201ENSMUST00000035700 3277 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Pde6bP23440 Rarg-202ENSMUST00000063339 2718 ntAPPRIS ALT2 TSL 1 (best) BASIC16.74■□□□□ 0.27
Pde6bP23440 Rbm47-203ENSMUST00000113724 2186 ntAPPRIS P3 TSL 5 BASIC16.74■□□□□ 0.27
Pde6bP23440 Wnk1-202ENSMUST00000060043 10575 ntAPPRIS P3 TSL 1 (best) BASIC16.74■□□□□ 0.27
Pde6bP23440 Rabl2-201ENSMUST00000023294 1640 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Pde6bP23440 Zfp800-202ENSMUST00000115320 4311 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Pde6bP23440 Nkx2-1-201ENSMUST00000001536 2809 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Pde6bP23440 Grm4-201ENSMUST00000118161 4537 ntAPPRIS P1 TSL 5 BASIC16.73■□□□□ 0.27
Pde6bP23440 Pola2-202ENSMUST00000165143 2397 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
Pde6bP23440 Cep152-201ENSMUST00000089776 5768 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Pde6bP23440 Hr-201ENSMUST00000022691 5487 ntAPPRIS P2 TSL 1 (best) BASIC16.73■□□□□ 0.27
Pde6bP23440 Dmkn-203ENSMUST00000085688 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC16.73■□□□□ 0.27
Pde6bP23440 Rbfox3-205ENSMUST00000117731 3084 ntAPPRIS ALT2 TSL 1 (best) BASIC16.73■□□□□ 0.27
Pde6bP23440 9630013D21Rik-204ENSMUST00000156790 3096 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
Pde6bP23440 Olfr55-201ENSMUST00000112168 948 ntAPPRIS P1 BASIC16.73■□□□□ 0.27
Pde6bP23440 Gm19710-202ENSMUST00000200320 493 ntTSL 3 BASIC16.73■□□□□ 0.27
Pde6bP23440 AC158538.2-201ENSMUST00000225455 906 ntBASIC16.73■□□□□ 0.27
Pde6bP23440 Rnase10-202ENSMUST00000164632 1521 ntAPPRIS ALT2 TSL 1 (best) BASIC16.73■□□□□ 0.27
Pde6bP23440 Pitpna-206ENSMUST00000179521 3727 ntAPPRIS ALT1 TSL 5 BASIC16.73■□□□□ 0.27
Pde6bP23440 Ehmt2-202ENSMUST00000078061 3746 ntAPPRIS ALT2 TSL 1 (best) BASIC16.73■□□□□ 0.27
Pde6bP23440 AC122301.2-201ENSMUST00000219020 1474 ntTSL 5 BASIC16.73■□□□□ 0.27
Pde6bP23440 Mapk8ip2-201ENSMUST00000023291 5558 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Pde6bP23440 Tmco1-204ENSMUST00000195015 1573 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Pde6bP23440 Taf6l-212ENSMUST00000177216 2167 ntAPPRIS P1 TSL 5 BASIC16.72■□□□□ 0.27
Pde6bP23440 Ap1g1-202ENSMUST00000093157 6899 ntAPPRIS P3 TSL 5 BASIC16.72■□□□□ 0.27
Pde6bP23440 Six3os1-212ENSMUST00000177220 5601 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
Pde6bP23440 Rab34-203ENSMUST00000108322 1685 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Pde6bP23440 Mael-202ENSMUST00000194057 1691 ntTSL 5 BASIC16.72■□□□□ 0.27
Pde6bP23440 Rabl6-201ENSMUST00000058137 3230 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Pde6bP23440 T-201ENSMUST00000074667 2046 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Pde6bP23440 Mdga1-208ENSMUST00000171691 8339 ntAPPRIS ALT2 TSL 5 BASIC16.72■□□□□ 0.27
Pde6bP23440 Wipi1-201ENSMUST00000047186 3338 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
Pde6bP23440 Rab10-201ENSMUST00000021001 3513 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Pde6bP23440 Cry1-201ENSMUST00000020227 3026 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Pde6bP23440 Ccdc84-202ENSMUST00000213813 2675 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
Pde6bP23440 Sfn-201ENSMUST00000057311 1613 ntAPPRIS P1 BASIC16.72■□□□□ 0.27
Pde6bP23440 Hist1h4k-201ENSMUST00000102983 312 ntAPPRIS P1 BASIC16.72■□□□□ 0.27
Pde6bP23440 Zfp688-201ENSMUST00000106300 1015 ntAPPRIS P1 TSL 2 BASIC16.72■□□□□ 0.27
Pde6bP23440 Usf2-202ENSMUST00000108119 849 ntTSL 5 BASIC16.72■□□□□ 0.27
Pde6bP23440 Polr2i-202ENSMUST00000108192 508 ntTSL 2 BASIC16.72■□□□□ 0.27
Pde6bP23440 Taf3-202ENSMUST00000114906 583 ntTSL 2 BASIC16.72■□□□□ 0.27
Pde6bP23440 Gm15920-201ENSMUST00000118998 402 ntBASIC16.72■□□□□ 0.27
Pde6bP23440 Slc7a10-203ENSMUST00000135452 629 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
Pde6bP23440 Gm10576-201ENSMUST00000191927 825 ntBASIC16.72■□□□□ 0.27
Pde6bP23440 AC127302.2-201ENSMUST00000215212 268 ntBASIC16.72■□□□□ 0.27
Retrieved 100 of 76,532 protein–RNA pairs in 47.3 ms