Protein–RNA interactions for Protein: P20293

T, Brachyury protein, mousemouse

Predictions only

Length 436 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TP20293 Trim39-203ENSMUST00000113706 3204 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
TP20293 Gm128-201ENSMUST00000090815 1959 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
TP20293 Gm39027-201ENSMUST00000208560 2942 ntTSL 5 BASIC14.47□□□□□ -0.09
TP20293 Cnnm2-201ENSMUST00000077666 3492 ntAPPRIS ALT1 TSL 1 (best) BASIC14.47□□□□□ -0.09
TP20293 Zbed5-201ENSMUST00000041466 2492 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
TP20293 Mef2b-201ENSMUST00000110140 1223 ntAPPRIS ALT2 TSL 1 (best) BASIC14.47□□□□□ -0.09
TP20293 Mef2b-202ENSMUST00000110141 1253 ntAPPRIS ALT2 TSL 1 (best) BASIC14.47□□□□□ -0.09
TP20293 9430038I01Rik-202ENSMUST00000117404 699 ntAPPRIS ALT2 TSL 5 BASIC14.47□□□□□ -0.09
TP20293 Dcdc2c-201ENSMUST00000020963 1041 ntTSL 5 BASIC14.47□□□□□ -0.09
TP20293 4930428E07Rik-201ENSMUST00000222132 920 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
TP20293 AC159301.1-201ENSMUST00000225130 1182 ntBASIC14.47□□□□□ -0.09
TP20293 Amz2-202ENSMUST00000092500 2816 ntAPPRIS P2 TSL 1 (best) BASIC14.47□□□□□ -0.09
TP20293 Tbc1d20-201ENSMUST00000028963 3386 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
TP20293 Daxx-201ENSMUST00000079421 2580 ntAPPRIS P2 TSL 1 (best) BASIC14.47□□□□□ -0.09
TP20293 Fam110a-201ENSMUST00000062047 1754 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
TP20293 Unc5d-202ENSMUST00000209401 3081 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
TP20293 Unc5d-203ENSMUST00000210298 3060 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
TP20293 Unc5d-205ENSMUST00000211448 3087 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
TP20293 Acss1-201ENSMUST00000028944 3618 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
TP20293 Wnt5b-202ENSMUST00000118120 2115 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
TP20293 Tfeb-201ENSMUST00000024786 2296 ntAPPRIS P3 TSL 1 (best) BASIC14.46□□□□□ -0.09
TP20293 Rpn2-201ENSMUST00000029171 2621 ntTSL 5 BASIC14.46□□□□□ -0.09
TP20293 Hnrnpm-205ENSMUST00000139302 2428 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
TP20293 Clec16a-204ENSMUST00000115824 6244 ntAPPRIS ALT2 TSL 5 BASIC14.46□□□□□ -0.09
TP20293 Clec16a-202ENSMUST00000066345 6244 ntAPPRIS P3 TSL 5 BASIC14.46□□□□□ -0.09
TP20293 Fkbp14-202ENSMUST00000117375 1830 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
TP20293 Cdh11-201ENSMUST00000075190 5647 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
TP20293 Rabggta-201ENSMUST00000062861 2338 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
TP20293 Mansc4-201ENSMUST00000100780 1125 ntAPPRIS P2 TSL 1 (best) BASIC14.46□□□□□ -0.09
TP20293 Scml4-203ENSMUST00000105495 1033 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
TP20293 Naa10-206ENSMUST00000114391 834 ntTSL 5 BASIC14.46□□□□□ -0.09
TP20293 Smim12-201ENSMUST00000142029 1022 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
TP20293 Tsen15-201ENSMUST00000015124 1133 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
TP20293 Gm20478-201ENSMUST00000173648 1031 ntTSL 3 BASIC14.46□□□□□ -0.09
TP20293 Gm3336-201ENSMUST00000179347 1149 ntAPPRIS P2 TSL 5 BASIC14.46□□□□□ -0.09
TP20293 Ifngr1-201ENSMUST00000020188 2112 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
TP20293 D530033B14Rik-201ENSMUST00000205412 546 ntTSL 5 BASIC14.46□□□□□ -0.09
TP20293 1700016B15Rik-201ENSMUST00000209027 733 ntBASIC14.46□□□□□ -0.09
TP20293 1700012D14Rik-201ENSMUST00000209597 605 ntTSL 3 BASIC14.46□□□□□ -0.09
TP20293 Gm3336-202ENSMUST00000213065 842 ntAPPRIS ALT2 TSL 1 (best) BASIC14.46□□□□□ -0.09
TP20293 9530082P21Rik-202ENSMUST00000181291 1798 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
TP20293 Gm12522-201ENSMUST00000142833 2439 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
TP20293 Nelfa-201ENSMUST00000030993 2580 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
TP20293 Tstd3-201ENSMUST00000029915 1588 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
TP20293 Dlat-201ENSMUST00000034567 4035 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.1
TP20293 Cblb-201ENSMUST00000114471 6648 ntAPPRIS P2 TSL 1 (best) BASIC14.46□□□□□ -0.1
TP20293 Aaed1-207ENSMUST00000222570 3011 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.1
TP20293 Flot1-209ENSMUST00000174080 1383 ntTSL 5 BASIC14.46□□□□□ -0.1
TP20293 Slc4a5-203ENSMUST00000113900 3630 ntAPPRIS ALT2 TSL 5 BASIC14.46□□□□□ -0.1
TP20293 Mcc-202ENSMUST00000164666 3606 ntTSL 1 (best) BASIC14.46□□□□□ -0.1
TP20293 Bsx-201ENSMUST00000067375 2960 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.1
TP20293 Sema4c-203ENSMUST00000191677 3779 ntAPPRIS P1 TSL 5 BASIC14.46□□□□□ -0.1
TP20293 Git2-204ENSMUST00000112185 5032 ntTSL 1 (best) BASIC14.46□□□□□ -0.1
TP20293 Gm26669-201ENSMUST00000181323 1808 ntTSL 5 BASIC14.45□□□□□ -0.1
TP20293 Gm37912-201ENSMUST00000191895 3076 ntBASIC14.45□□□□□ -0.1
TP20293 Jph4-202ENSMUST00000124493 3200 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
TP20293 Nprl3-201ENSMUST00000020530 2865 ntAPPRIS P2 TSL 1 (best) BASIC14.45□□□□□ -0.1
TP20293 Tdg-201ENSMUST00000092266 2959 ntAPPRIS ALT2 TSL 1 (best) BASIC14.45□□□□□ -0.1
TP20293 Synm-204ENSMUST00000208231 4457 ntAPPRIS ALT2 TSL 1 (best) BASIC14.45□□□□□ -0.1
TP20293 Gm6588-201ENSMUST00000100882 2313 ntAPPRIS P1 BASIC14.45□□□□□ -0.1
TP20293 Cadm2-203ENSMUST00000120898 2768 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
TP20293 4933405L10Rik-201ENSMUST00000013302 1214 ntAPPRIS P2 TSL 1 (best) BASIC14.45□□□□□ -0.1
TP20293 C030037D09Rik-202ENSMUST00000136201 1216 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
TP20293 Wwox-207ENSMUST00000160862 1715 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
TP20293 Gypc-203ENSMUST00000174459 2180 ntAPPRIS P3 TSL 1 (best) BASIC14.45□□□□□ -0.1
TP20293 4930445N18Rik-202ENSMUST00000181345 1033 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
TP20293 Zyx-207ENSMUST00000203652 2605 ntAPPRIS P3 TSL 1 (best) BASIC14.45□□□□□ -0.1
TP20293 Gm45133-201ENSMUST00000207548 2773 ntBASIC14.45□□□□□ -0.1
TP20293 Zfp930-203ENSMUST00000212312 493 ntTSL 2 BASIC14.45□□□□□ -0.1
TP20293 Gm18622-201ENSMUST00000219361 595 ntBASIC14.45□□□□□ -0.1
TP20293 Slc35e2-201ENSMUST00000043829 2910 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
TP20293 Hacd1-201ENSMUST00000074854 926 ntAPPRIS P1 TSL 5 BASIC14.45□□□□□ -0.1
TP20293 Prickle1-201ENSMUST00000048982 4085 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
TP20293 Dmpk-203ENSMUST00000108474 2591 ntAPPRIS ALT2 TSL 1 (best) BASIC14.45□□□□□ -0.1
TP20293 Atp2c1-205ENSMUST00000163879 2408 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
TP20293 Gm42473-201ENSMUST00000201056 2291 ntBASIC14.45□□□□□ -0.1
TP20293 Cgn-202ENSMUST00000107273 5016 ntAPPRIS P3 TSL 1 (best) BASIC14.45□□□□□ -0.1
TP20293 Tcf3-201ENSMUST00000020377 2842 ntAPPRIS ALT2 TSL 5 BASIC14.45□□□□□ -0.1
TP20293 Dock4-201ENSMUST00000037488 8552 ntAPPRIS P2 TSL 1 (best) BASIC14.45□□□□□ -0.1
TP20293 Btbd3-202ENSMUST00000091556 4657 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
TP20293 Chd1-205ENSMUST00000173311 4211 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
TP20293 Zfp423-202ENSMUST00000109655 4907 ntAPPRIS P2 TSL 1 (best) BASIC14.45□□□□□ -0.1
TP20293 Slc10a3-202ENSMUST00000073067 1910 ntAPPRIS P2 TSL 1 (best) BASIC14.45□□□□□ -0.1
TP20293 Xpo6-201ENSMUST00000009344 4455 ntAPPRIS P3 TSL 1 (best) BASIC14.45□□□□□ -0.1
TP20293 Cyp11b2-201ENSMUST00000167634 1625 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
TP20293 Wnt10b-206ENSMUST00000228546 2709 ntBASIC14.44□□□□□ -0.1
TP20293 Shroom3-203ENSMUST00000113055 6765 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
TP20293 Snx17-201ENSMUST00000031029 2018 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
TP20293 Inhbc-201ENSMUST00000026472 1859 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
TP20293 Spdya-201ENSMUST00000064420 1877 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
TP20293 Pcbp3-206ENSMUST00000168465 1748 ntAPPRIS P3 TSL 5 BASIC14.44□□□□□ -0.1
TP20293 Ip6k2-206ENSMUST00000193560 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC14.44□□□□□ -0.1
TP20293 Rexo4-202ENSMUST00000114020 2278 ntAPPRIS P2 TSL 1 (best) BASIC14.44□□□□□ -0.1
TP20293 Ccnj-202ENSMUST00000119316 3763 ntAPPRIS P1 TSL 5 BASIC14.44□□□□□ -0.1
TP20293 Vwa5b2-203ENSMUST00000100074 2512 ntAPPRIS P3 TSL 1 (best) BASIC14.44□□□□□ -0.1
TP20293 Gpr88-201ENSMUST00000090473 3469 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
TP20293 Shroom1-204ENSMUST00000109013 3312 ntAPPRIS P3 TSL 1 (best) BASIC14.44□□□□□ -0.1
TP20293 Dlg1-201ENSMUST00000023454 3725 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
TP20293 Spdef-201ENSMUST00000025054 1824 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
TP20293 Hist1h4k-201ENSMUST00000102983 312 ntAPPRIS P1 BASIC14.44□□□□□ -0.1
Retrieved 100 of 76,532 protein–RNA pairs in 47.3 ms