Protein–RNA interactions for Protein: P12960

Cntn1, Contactin-1, mousemouse

Predictions only

Length 1,020 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cntn1P12960 Zkscan17-202ENSMUST00000101150 3771 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
Cntn1P12960 Pxn-201ENSMUST00000067268 3706 ntAPPRIS P3 TSL 1 (best) BASIC14.72□□□□□ -0.05
Cntn1P12960 Tcta-201ENSMUST00000044725 1668 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
Cntn1P12960 Adgrb2-205ENSMUST00000106017 5104 ntAPPRIS P3 TSL 1 (best) BASIC14.72□□□□□ -0.05
Cntn1P12960 Gps1-202ENSMUST00000116305 1827 ntAPPRIS P2 TSL 1 (best) BASIC14.72□□□□□ -0.05
Cntn1P12960 Epo-202ENSMUST00000111038 855 ntAPPRIS P3 TSL 5 BASIC14.72□□□□□ -0.05
Cntn1P12960 9130204K15Rik-201ENSMUST00000131441 867 ntTSL 5 BASIC14.72□□□□□ -0.05
Cntn1P12960 Gm16156-201ENSMUST00000141168 713 ntTSL 3 BASIC14.72□□□□□ -0.05
Cntn1P12960 Sirpa-213ENSMUST00000163034 677 ntTSL 3 BASIC14.72□□□□□ -0.05
Cntn1P12960 Nptn-211ENSMUST00000177064 582 ntTSL 5 BASIC14.72□□□□□ -0.05
Cntn1P12960 Gm30097-202ENSMUST00000194580 329 ntTSL 3 BASIC14.72□□□□□ -0.05
Cntn1P12960 Gm2213-201ENSMUST00000197485 688 ntBASIC14.72□□□□□ -0.05
Cntn1P12960 Slbp-202ENSMUST00000075670 1027 ntAPPRIS ALT2 TSL 1 (best) BASIC14.72□□□□□ -0.05
Cntn1P12960 Sh2d4a-201ENSMUST00000066594 2718 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Cntn1P12960 Tnfrsf1a-201ENSMUST00000032491 2156 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Cntn1P12960 Ttll5-201ENSMUST00000040179 5081 ntAPPRIS P3 TSL 1 (best) BASIC14.72□□□□□ -0.05
Cntn1P12960 Papd4-205ENSMUST00000225868 3081 ntAPPRIS ALT1 BASIC14.72□□□□□ -0.05
Cntn1P12960 Aire-213ENSMUST00000148469 1618 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
Cntn1P12960 Gm19684-201ENSMUST00000173128 1611 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Cntn1P12960 6030419C18Rik-202ENSMUST00000216294 1601 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Cntn1P12960 Kctd8-201ENSMUST00000054095 2859 ntAPPRIS P2 TSL 1 (best) BASIC14.72□□□□□ -0.05
Cntn1P12960 C2cd2-201ENSMUST00000170757 6555 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Cntn1P12960 Clgn-202ENSMUST00000109831 2293 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Cntn1P12960 Neu4-202ENSMUST00000190212 1719 ntAPPRIS ALT2 TSL 1 (best) BASIC14.72□□□□□ -0.05
Cntn1P12960 Tbc1d8-201ENSMUST00000054462 4451 ntAPPRIS P2 TSL 1 (best) BASIC14.72□□□□□ -0.05
Cntn1P12960 Emx2-201ENSMUST00000062216 2916 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Cntn1P12960 Lman1-202ENSMUST00000120461 2208 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Cntn1P12960 Mindy4-203ENSMUST00000204842 2211 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
Cntn1P12960 Gm3739-201ENSMUST00000165744 2011 ntAPPRIS P1 TSL 5 BASIC14.71□□□□□ -0.05
Cntn1P12960 Rnf14-203ENSMUST00000171461 3351 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Cntn1P12960 Nsmaf-201ENSMUST00000029910 3507 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Cntn1P12960 Gpr160-207ENSMUST00000166278 1689 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Cntn1P12960 Gm26761-201ENSMUST00000180650 2192 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
Cntn1P12960 Smarcd1-201ENSMUST00000023759 3153 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Cntn1P12960 Mef2b-203ENSMUST00000110143 1312 ntAPPRIS ALT2 TSL 1 (best) BASIC14.71□□□□□ -0.05
Cntn1P12960 Aldh1a3-203ENSMUST00000174209 1496 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
Cntn1P12960 Fubp3-202ENSMUST00000113482 3268 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Cntn1P12960 Wee1-201ENSMUST00000033326 3419 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Cntn1P12960 Ifitm10-201ENSMUST00000059223 3412 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
Cntn1P12960 Arfgap2-202ENSMUST00000080008 3068 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Cntn1P12960 Foxo1-201ENSMUST00000053764 8665 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Cntn1P12960 Slc9a3r1-201ENSMUST00000021077 1925 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Cntn1P12960 Isg20l2-201ENSMUST00000055984 2893 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Cntn1P12960 Cpt2-203ENSMUST00000106720 1015 ntTSL 2 BASIC14.71□□□□□ -0.05
Cntn1P12960 Cyb5rl-204ENSMUST00000106760 840 ntTSL 3 BASIC14.71□□□□□ -0.05
Cntn1P12960 Cnbp-202ENSMUST00000113617 952 ntTSL 5 BASIC14.71□□□□□ -0.05
Cntn1P12960 Gm4995-201ENSMUST00000117247 432 ntBASIC14.71□□□□□ -0.05
Cntn1P12960 A930006K02Rik-201ENSMUST00000149172 776 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
Cntn1P12960 Znhit1-206ENSMUST00000156963 1208 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
Cntn1P12960 Fau-202ENSMUST00000178310 571 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Cntn1P12960 Gm43073-201ENSMUST00000198200 1189 ntBASIC14.71□□□□□ -0.05
Cntn1P12960 Gm45683-201ENSMUST00000210825 1247 ntBASIC14.71□□□□□ -0.05
Cntn1P12960 AC174742.1-201ENSMUST00000218272 304 ntBASIC14.71□□□□□ -0.05
Cntn1P12960 AC160980.1-201ENSMUST00000224136 970 ntBASIC14.71□□□□□ -0.05
Cntn1P12960 Meaf6-201ENSMUST00000055213 872 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
Cntn1P12960 Cfap69-205ENSMUST00000135252 2188 ntAPPRIS ALT2 TSL 1 (best) BASIC14.71□□□□□ -0.05
Cntn1P12960 Pias3-201ENSMUST00000064900 2931 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.06
Cntn1P12960 6430710C18Rik-203ENSMUST00000136807 1540 ntTSL 1 (best) BASIC14.71□□□□□ -0.06
Cntn1P12960 Phf21b-203ENSMUST00000159939 3639 ntAPPRIS P2 TSL 1 (best) BASIC14.71□□□□□ -0.06
Cntn1P12960 Map3k6-201ENSMUST00000030677 4334 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Cntn1P12960 Gclc-201ENSMUST00000034905 3423 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Cntn1P12960 Zfp995-205ENSMUST00000190066 2221 ntAPPRIS P1 TSL 2 BASIC14.7□□□□□ -0.06
Cntn1P12960 Dctd-203ENSMUST00000170263 2096 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Cntn1P12960 Smtnl1-201ENSMUST00000028471 1761 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Cntn1P12960 Tnip2-203ENSMUST00000114359 1642 ntTSL 5 BASIC14.7□□□□□ -0.06
Cntn1P12960 Atp6v0d1-201ENSMUST00000013304 1629 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Cntn1P12960 9130401M01Rik-201ENSMUST00000100655 1341 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Cntn1P12960 Upf1-202ENSMUST00000215817 4518 ntAPPRIS ALT2 TSL 1 (best) BASIC14.7□□□□□ -0.06
Cntn1P12960 Nanos1-201ENSMUST00000088237 3927 ntAPPRIS P1 BASIC14.7□□□□□ -0.06
Cntn1P12960 Zfp423-202ENSMUST00000109655 4907 ntAPPRIS P2 TSL 1 (best) BASIC14.7□□□□□ -0.06
Cntn1P12960 Spdya-204ENSMUST00000167641 1891 ntAPPRIS P1 TSL 5 BASIC14.7□□□□□ -0.06
Cntn1P12960 Pspc1-202ENSMUST00000163924 2863 ntAPPRIS ALT2 TSL 1 (best) BASIC14.7□□□□□ -0.06
Cntn1P12960 Mau2-204ENSMUST00000212308 2887 ntAPPRIS ALT2 TSL 1 (best) BASIC14.7□□□□□ -0.06
Cntn1P12960 Dlgap1-207ENSMUST00000133983 7173 ntAPPRIS ALT2 TSL 1 (best) BASIC14.7□□□□□ -0.06
Cntn1P12960 I0C0044D17Rik-201ENSMUST00000097964 2264 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Cntn1P12960 Aig1-202ENSMUST00000105534 617 ntTSL 5 BASIC14.7□□□□□ -0.06
Cntn1P12960 Fis1-202ENSMUST00000111094 948 ntTSL 2 BASIC14.7□□□□□ -0.06
Cntn1P12960 Naa10-203ENSMUST00000114387 979 ntAPPRIS ALT2 TSL 2 BASIC14.7□□□□□ -0.06
Cntn1P12960 Josd2-202ENSMUST00000117324 858 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Cntn1P12960 9130024F11Rik-204ENSMUST00000187927 517 ntTSL 5 BASIC14.7□□□□□ -0.06
Cntn1P12960 Gm37335-201ENSMUST00000192656 447 ntTSL 5 BASIC14.7□□□□□ -0.06
Cntn1P12960 Gm7229-201ENSMUST00000214719 1007 ntBASIC14.7□□□□□ -0.06
Cntn1P12960 Rb1cc1-201ENSMUST00000027040 7607 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Cntn1P12960 C77080-201ENSMUST00000052602 5187 ntAPPRIS P3 TSL 1 (best) BASIC14.7□□□□□ -0.06
Cntn1P12960 Camk2d-221ENSMUST00000171289 2217 ntTSL 5 BASIC14.7□□□□□ -0.06
Cntn1P12960 Cr1l-208ENSMUST00000194111 1501 ntAPPRIS ALT2 TSL 1 (best) BASIC14.7□□□□□ -0.06
Cntn1P12960 Galnt6os-201ENSMUST00000160960 1389 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
Cntn1P12960 Fam241b-204ENSMUST00000125704 1769 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Cntn1P12960 Slit1-203ENSMUST00000169141 5673 ntTSL 5 BASIC14.7□□□□□ -0.06
Cntn1P12960 Rell1-204ENSMUST00000154169 3241 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Cntn1P12960 Gm44616-201ENSMUST00000206417 1732 ntBASIC14.69□□□□□ -0.06
Cntn1P12960 9130024F11Rik-201ENSMUST00000135238 1300 ntTSL 2 BASIC14.69□□□□□ -0.06
Cntn1P12960 Ssu2-201ENSMUST00000060847 1321 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Cntn1P12960 Pex5l-206ENSMUST00000108226 2632 ntAPPRIS ALT2 TSL 1 (best) BASIC14.69□□□□□ -0.06
Cntn1P12960 Terf1-201ENSMUST00000027057 1581 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
Cntn1P12960 B3gnt5-202ENSMUST00000119468 2229 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Cntn1P12960 Tlnrd1-201ENSMUST00000094216 4433 ntAPPRIS P1 BASIC14.69□□□□□ -0.06
Cntn1P12960 Foxc2-201ENSMUST00000054691 2725 ntAPPRIS P1 BASIC14.69□□□□□ -0.06
Cntn1P12960 Akap7-203ENSMUST00000100012 2321 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
Cntn1P12960 Dynlt1c-201ENSMUST00000092966 2589 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Retrieved 100 of 76,532 protein–RNA pairs in 322.4 ms