Protein–RNA interactions for Protein: P0CW02

Ly6c1, Lymphocyte antigen 6C1, mousemouse

Predictions only

Length 131 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ly6c1P0CW02 Gm11453-201ENSMUST00000117318 1007 ntBASIC12.83□□□□□ -0.36
Ly6c1P0CW02 Retsat-204ENSMUST00000176168 1203 ntTSL 5 BASIC12.83□□□□□ -0.36
Ly6c1P0CW02 Rab10os-206ENSMUST00000179908 746 ntTSL 5 BASIC12.83□□□□□ -0.36
Ly6c1P0CW02 Spr-ps1-202ENSMUST00000186281 706 ntTSL 2 BASIC12.83□□□□□ -0.36
Ly6c1P0CW02 Rpl31-205ENSMUST00000194746 703 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
Ly6c1P0CW02 Ndufv2-201ENSMUST00000024909 927 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
Ly6c1P0CW02 Ly6g6f-201ENSMUST00000038507 1141 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Ly6c1P0CW02 Cmtm8-201ENSMUST00000047013 1064 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Ly6c1P0CW02 6030498E09Rik-201ENSMUST00000050744 1291 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Ly6c1P0CW02 Hoxb1-201ENSMUST00000019117 2086 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Ly6c1P0CW02 Sh2d4a-201ENSMUST00000066594 2718 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Ly6c1P0CW02 Mllt11-201ENSMUST00000065482 1923 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Ly6c1P0CW02 Suco-201ENSMUST00000048377 6327 ntAPPRIS P2 TSL 1 (best) BASIC12.83□□□□□ -0.36
Ly6c1P0CW02 Bicd2-203ENSMUST00000110085 4588 ntAPPRIS ALT2 TSL 1 (best) BASIC12.83□□□□□ -0.36
Ly6c1P0CW02 Nes-201ENSMUST00000090973 6126 ntAPPRIS P2 TSL 1 (best) BASIC12.83□□□□□ -0.36
Ly6c1P0CW02 P2rx3-201ENSMUST00000028465 1812 ntAPPRIS P2 TSL 1 (best) BASIC12.83□□□□□ -0.36
Ly6c1P0CW02 Zfp142-201ENSMUST00000027315 6480 ntAPPRIS ALT2 TSL 1 (best) BASIC12.83□□□□□ -0.36
Ly6c1P0CW02 Btbd1-201ENSMUST00000026093 3001 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Ly6c1P0CW02 Acap3-202ENSMUST00000105584 4365 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Ly6c1P0CW02 Ext2-201ENSMUST00000028623 2871 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Ly6c1P0CW02 Dpagt1-201ENSMUST00000054708 2205 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Ly6c1P0CW02 Ntng1-203ENSMUST00000106570 1386 ntTSL 5 BASIC12.82□□□□□ -0.36
Ly6c1P0CW02 Gm5184-201ENSMUST00000220417 1702 ntBASIC12.82□□□□□ -0.36
Ly6c1P0CW02 2610027K06Rik-203ENSMUST00000140673 2076 ntTSL 5 BASIC12.82□□□□□ -0.36
Ly6c1P0CW02 Ror1-201ENSMUST00000039630 5762 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Ly6c1P0CW02 Arsi-201ENSMUST00000040359 2975 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Ly6c1P0CW02 Tcf3-201ENSMUST00000020377 2842 ntAPPRIS ALT2 TSL 5 BASIC12.82□□□□□ -0.36
Ly6c1P0CW02 C2cd2l-206ENSMUST00000214602 2808 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Ly6c1P0CW02 4933415F23Rik-201ENSMUST00000073179 1781 ntAPPRIS P1 BASIC12.82□□□□□ -0.36
Ly6c1P0CW02 Cables1-202ENSMUST00000171109 3396 ntAPPRIS ALT2 TSL 1 (best) BASIC12.82□□□□□ -0.36
Ly6c1P0CW02 Slc24a4-202ENSMUST00000159329 4465 ntAPPRIS ALT2 TSL 1 (best) BASIC12.82□□□□□ -0.36
Ly6c1P0CW02 AL691505.1-201ENSMUST00000219965 1618 ntTSL 5 BASIC12.82□□□□□ -0.36
Ly6c1P0CW02 Adgrl1-201ENSMUST00000045393 5643 ntAPPRIS P1 TSL 5 BASIC12.82□□□□□ -0.36
Ly6c1P0CW02 Tcf24-202ENSMUST00000185184 4193 ntAPPRIS P1 TSL 5 BASIC12.82□□□□□ -0.36
Ly6c1P0CW02 Emp3-202ENSMUST00000164119 784 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Ly6c1P0CW02 Hsf4-203ENSMUST00000172525 1276 ntTSL 5 BASIC12.82□□□□□ -0.36
Ly6c1P0CW02 Gm10499-201ENSMUST00000174094 934 ntBASIC12.82□□□□□ -0.36
Ly6c1P0CW02 Gsdmcl2-204ENSMUST00000186026 736 ntBASIC12.82□□□□□ -0.36
Ly6c1P0CW02 Gsdmcl1-202ENSMUST00000190937 735 ntBASIC12.82□□□□□ -0.36
Ly6c1P0CW02 Ogfod2-207ENSMUST00000196627 532 ntTSL 3 BASIC12.82□□□□□ -0.36
Ly6c1P0CW02 Gm39317-201ENSMUST00000213360 1138 ntTSL 5 BASIC12.82□□□□□ -0.36
Ly6c1P0CW02 Timm9-205ENSMUST00000221178 529 ntTSL 3 BASIC12.82□□□□□ -0.36
Ly6c1P0CW02 Gnptg-201ENSMUST00000038973 1234 ntAPPRIS P2 TSL 1 (best) BASIC12.82□□□□□ -0.36
Ly6c1P0CW02 Gchfr-201ENSMUST00000057454 645 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Ly6c1P0CW02 Pink1-202ENSMUST00000105816 1465 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Ly6c1P0CW02 Gpr160-207ENSMUST00000166278 1689 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Ly6c1P0CW02 Gyg-203ENSMUST00000178328 1698 ntAPPRIS P2 TSL 1 (best) BASIC12.82□□□□□ -0.36
Ly6c1P0CW02 Fam184a-201ENSMUST00000020003 4164 ntAPPRIS P1 TSL 5 BASIC12.82□□□□□ -0.36
Ly6c1P0CW02 Crk-201ENSMUST00000017920 3642 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Ly6c1P0CW02 Gm44616-201ENSMUST00000206417 1732 ntBASIC12.82□□□□□ -0.36
Ly6c1P0CW02 Acvrl1-204ENSMUST00000120028 1932 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Ly6c1P0CW02 Rasgef1b-206ENSMUST00000161516 2523 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Ly6c1P0CW02 Tapt1-201ENSMUST00000055128 3513 ntAPPRIS P1 TSL 5 BASIC12.82□□□□□ -0.36
Ly6c1P0CW02 Srpr-201ENSMUST00000034541 2993 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Ly6c1P0CW02 Whrn-207ENSMUST00000107393 4028 ntAPPRIS ALT2 TSL 1 (best) BASIC12.81□□□□□ -0.36
Ly6c1P0CW02 Whrn-203ENSMUST00000084510 4049 ntAPPRIS P4 TSL 1 (best) BASIC12.81□□□□□ -0.36
Ly6c1P0CW02 Crebl2-201ENSMUST00000046303 3629 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Ly6c1P0CW02 Ccr9-202ENSMUST00000163559 3004 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Ly6c1P0CW02 Kctd12-202ENSMUST00000184744 6057 ntAPPRIS P1 BASIC12.81□□□□□ -0.36
Ly6c1P0CW02 Ovca2-201ENSMUST00000071562 2670 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Ly6c1P0CW02 Nap1l4-209ENSMUST00000209098 2281 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Ly6c1P0CW02 Exoc6-201ENSMUST00000066439 2729 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Ly6c1P0CW02 Dnajc24-201ENSMUST00000102555 1197 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Ly6c1P0CW02 Gm45799-202ENSMUST00000106786 409 ntAPPRIS ALT2 TSL 3 BASIC12.81□□□□□ -0.36
Ly6c1P0CW02 Chchd7-205ENSMUST00000120732 711 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Ly6c1P0CW02 Rpl36-ps8-201ENSMUST00000121187 315 ntBASIC12.81□□□□□ -0.36
Ly6c1P0CW02 Gm12260-201ENSMUST00000122447 411 ntBASIC12.81□□□□□ -0.36
Ly6c1P0CW02 Mcub-204ENSMUST00000153506 1005 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Ly6c1P0CW02 Gm27002-201ENSMUST00000182789 620 ntTSL 2 BASIC12.81□□□□□ -0.36
Ly6c1P0CW02 Apoa1-201ENSMUST00000034588 1035 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Ly6c1P0CW02 Bex3-201ENSMUST00000053540 930 ntAPPRIS P3 TSL 1 (best) BASIC12.81□□□□□ -0.36
Ly6c1P0CW02 Crb3-201ENSMUST00000071826 1194 ntAPPRIS P3 TSL 3 BASIC12.81□□□□□ -0.36
Ly6c1P0CW02 Chchd2-201ENSMUST00000094280 915 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Ly6c1P0CW02 Cend1-202ENSMUST00000124444 1733 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Ly6c1P0CW02 Gm11873-201ENSMUST00000117877 1304 ntBASIC12.81□□□□□ -0.36
Ly6c1P0CW02 Ddx39-202ENSMUST00000109810 1794 ntAPPRIS P1 TSL 5 BASIC12.81□□□□□ -0.36
Ly6c1P0CW02 Wac-215ENSMUST00000171042 2205 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Ly6c1P0CW02 Adamts19-201ENSMUST00000052907 4666 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Ly6c1P0CW02 Rab6a-202ENSMUST00000098252 3110 ntAPPRIS ALT1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Ly6c1P0CW02 Shank1-201ENSMUST00000107934 6477 ntAPPRIS ALT2 TSL 5 BASIC12.81□□□□□ -0.36
Ly6c1P0CW02 Terf1-201ENSMUST00000027057 1581 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Ly6c1P0CW02 Tcf3-203ENSMUST00000105339 2096 ntAPPRIS ALT2 TSL 5 BASIC12.81□□□□□ -0.36
Ly6c1P0CW02 Nrxn1-216ENSMUST00000174331 6282 ntAPPRIS ALT1 TSL 5 BASIC12.8□□□□□ -0.36
Ly6c1P0CW02 Sec31a-201ENSMUST00000094578 4228 ntAPPRIS P2 TSL 5 BASIC12.8□□□□□ -0.36
Ly6c1P0CW02 Rabepk-203ENSMUST00000118108 1431 ntAPPRIS P1 TSL 5 BASIC12.8□□□□□ -0.36
Ly6c1P0CW02 Irf7-201ENSMUST00000026571 1916 ntAPPRIS P3 TSL 1 (best) BASIC12.8□□□□□ -0.36
Ly6c1P0CW02 Tnfrsf1a-201ENSMUST00000032491 2156 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Ly6c1P0CW02 Otol1-201ENSMUST00000053013 2161 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Ly6c1P0CW02 Sbf2-213ENSMUST00000171218 1476 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Ly6c1P0CW02 Pcsk6-201ENSMUST00000055576 4405 ntAPPRIS P3 TSL 5 BASIC12.8□□□□□ -0.36
Ly6c1P0CW02 Gm17501-201ENSMUST00000181247 1700 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Ly6c1P0CW02 Cdk2-201ENSMUST00000026415 2240 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Ly6c1P0CW02 Fem1b-201ENSMUST00000034775 6785 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Ly6c1P0CW02 Upf1-202ENSMUST00000215817 4518 ntAPPRIS ALT2 TSL 1 (best) BASIC12.8□□□□□ -0.36
Ly6c1P0CW02 4930431F12Rik-202ENSMUST00000199309 2263 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Ly6c1P0CW02 Stox2-208ENSMUST00000211737 4573 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Ly6c1P0CW02 Gm21586-201ENSMUST00000107988 264 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Ly6c1P0CW02 Gm21953-201ENSMUST00000108002 264 ntAPPRIS P1 TSL 5 BASIC12.8□□□□□ -0.36
Ly6c1P0CW02 H13-203ENSMUST00000109825 1063 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Ly6c1P0CW02 Gm11906-201ENSMUST00000124792 680 ntTSL 5 BASIC12.8□□□□□ -0.36
Retrieved 100 of 76,532 protein–RNA pairs in 37.7 ms