Protein–RNA interactions for Protein: P0C8K7

Smim1, Small integral membrane protein 1, mousemouse

Predictions only

Length 78 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smim1P0C8K7 Paip2-201ENSMUST00000041314 1475 ntAPPRIS P1 TSL 1 (best) BASIC10.59□□□□□ -0.71
Smim1P0C8K7 Rassf10-201ENSMUST00000182858 3496 ntAPPRIS P1 BASIC10.59□□□□□ -0.71
Smim1P0C8K7 Tle3-201ENSMUST00000034820 4646 ntTSL 1 (best) BASIC10.59□□□□□ -0.71
Smim1P0C8K7 Tsc22d4-203ENSMUST00000100540 2730 ntTSL 1 (best) BASIC10.59□□□□□ -0.71
Smim1P0C8K7 Olfr718-ps1-203ENSMUST00000215102 4913 ntAPPRIS P5 TSL 5 BASIC10.59□□□□□ -0.71
Smim1P0C8K7 Stxbp5l-202ENSMUST00000114775 1691 ntTSL 1 (best) BASIC10.59□□□□□ -0.71
Smim1P0C8K7 Zbtb25-201ENSMUST00000167011 1681 ntAPPRIS P1 TSL 2 BASIC10.59□□□□□ -0.71
Smim1P0C8K7 Chst3-203ENSMUST00000167915 1672 ntAPPRIS ALT2 TSL 1 (best) BASIC10.59□□□□□ -0.71
Smim1P0C8K7 Gm42769-201ENSMUST00000198576 1659 ntBASIC10.59□□□□□ -0.71
Smim1P0C8K7 Ppp1r15a-202ENSMUST00000167273 2809 ntAPPRIS P1 TSL 2 BASIC10.59□□□□□ -0.71
Smim1P0C8K7 Prdm4-207ENSMUST00000220032 3962 ntTSL 5 BASIC10.59□□□□□ -0.71
Smim1P0C8K7 Tuft1-203ENSMUST00000196655 2156 ntTSL 5 BASIC10.59□□□□□ -0.71
Smim1P0C8K7 Irak1-204ENSMUST00000114352 3825 ntAPPRIS P3 TSL 1 (best) BASIC10.59□□□□□ -0.71
Smim1P0C8K7 Glg1-204ENSMUST00000169020 7021 ntAPPRIS P1 TSL 1 (best) BASIC10.59□□□□□ -0.71
Smim1P0C8K7 Gars-201ENSMUST00000003572 2380 ntAPPRIS P1 TSL 1 (best) BASIC10.59□□□□□ -0.71
Smim1P0C8K7 Adal-205ENSMUST00000119031 2477 ntAPPRIS P1 TSL 5 BASIC10.59□□□□□ -0.71
Smim1P0C8K7 Dsel-201ENSMUST00000035462 5759 ntAPPRIS P1 TSL 1 (best) BASIC10.59□□□□□ -0.71
Smim1P0C8K7 Txndc11-202ENSMUST00000118362 4248 ntTSL 1 (best) BASIC10.59□□□□□ -0.71
Smim1P0C8K7 Cdsn-201ENSMUST00000044804 2678 ntAPPRIS P1 TSL 1 (best) BASIC10.59□□□□□ -0.71
Smim1P0C8K7 Dagla-201ENSMUST00000039327 5634 ntAPPRIS P1 TSL 5 BASIC10.59□□□□□ -0.71
Smim1P0C8K7 Shc4-203ENSMUST00000110480 3671 ntTSL 1 (best) BASIC10.59□□□□□ -0.71
Smim1P0C8K7 Rom1-201ENSMUST00000096242 1526 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
Smim1P0C8K7 Kdelr2-201ENSMUST00000110731 1829 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
Smim1P0C8K7 Tcn2-204ENSMUST00000109990 1914 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
Smim1P0C8K7 Pla2g16-203ENSMUST00000136756 1901 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
Smim1P0C8K7 Ash2l-202ENSMUST00000110608 2134 ntTSL 5 BASIC10.58□□□□□ -0.72
Smim1P0C8K7 Vamp2-201ENSMUST00000021273 2205 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
Smim1P0C8K7 Arl6ip6-201ENSMUST00000028336 2548 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
Smim1P0C8K7 Sun1-202ENSMUST00000078690 2608 ntAPPRIS ALT2 TSL 5 BASIC10.58□□□□□ -0.72
Smim1P0C8K7 Tmtc4-201ENSMUST00000037726 3416 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
Smim1P0C8K7 Lingo3-201ENSMUST00000053986 3439 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
Smim1P0C8K7 Gpr137c-201ENSMUST00000146150 3917 ntAPPRIS P2 TSL 5 BASIC10.58□□□□□ -0.72
Smim1P0C8K7 Cobl-201ENSMUST00000046755 5615 ntAPPRIS P3 TSL 1 (best) BASIC10.58□□□□□ -0.72
Smim1P0C8K7 Arid3a-202ENSMUST00000105376 4892 ntAPPRIS P3 TSL 1 (best) BASIC10.58□□□□□ -0.72
Smim1P0C8K7 Tbx3-201ENSMUST00000018748 4856 ntTSL 1 (best) BASIC10.58□□□□□ -0.72
Smim1P0C8K7 Tle1-204ENSMUST00000102848 3660 ntTSL 1 (best) BASIC10.58□□□□□ -0.72
Smim1P0C8K7 Men1-208ENSMUST00000113504 2663 ntAPPRIS P2 TSL 1 (best) BASIC10.58□□□□□ -0.72
Smim1P0C8K7 Fut9-202ENSMUST00000108199 2579 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
Smim1P0C8K7 Ptprt-202ENSMUST00000109442 7719 ntAPPRIS ALT2 TSL 5 BASIC10.58□□□□□ -0.72
Smim1P0C8K7 Myo16-204ENSMUST00000208309 2462 ntTSL 1 (best) BASIC10.58□□□□□ -0.72
Smim1P0C8K7 Hs3st1-201ENSMUST00000053116 1684 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
Smim1P0C8K7 AC154855.1-201ENSMUST00000227353 1458 ntBASIC10.58□□□□□ -0.72
Smim1P0C8K7 Dennd5b-201ENSMUST00000111557 9831 ntAPPRIS P1 TSL 5 BASIC10.58□□□□□ -0.72
Smim1P0C8K7 Anapc16-201ENSMUST00000020307 1379 ntTSL 2 BASIC10.58□□□□□ -0.72
Smim1P0C8K7 1700012B09Rik-204ENSMUST00000191047 654 ntAPPRIS ALT2 TSL 3 BASIC10.58□□□□□ -0.72
Smim1P0C8K7 Gm18421-201ENSMUST00000204122 625 ntBASIC10.58□□□□□ -0.72
Smim1P0C8K7 Timp4-202ENSMUST00000205131 945 ntTSL 1 (best) BASIC10.58□□□□□ -0.72
Smim1P0C8K7 Gm36736-201ENSMUST00000206060 646 ntTSL 3 BASIC10.58□□□□□ -0.72
Smim1P0C8K7 Slc7a6os-201ENSMUST00000035925 1246 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
Smim1P0C8K7 Fam149b-201ENSMUST00000037698 924 ntTSL 1 (best) BASIC10.58□□□□□ -0.72
Smim1P0C8K7 Zfp467-203ENSMUST00000114558 3115 ntTSL 1 (best) BASIC10.58□□□□□ -0.72
Smim1P0C8K7 Iws1-206ENSMUST00000212675 2936 ntAPPRIS ALT2 TSL 5 BASIC10.58□□□□□ -0.72
Smim1P0C8K7 Gabpb1-205ENSMUST00000110424 2613 ntAPPRIS P3 TSL 1 (best) BASIC10.58□□□□□ -0.72
Smim1P0C8K7 Mms22l-201ENSMUST00000050446 4261 ntTSL 1 (best) BASIC10.58□□□□□ -0.72
Smim1P0C8K7 Marveld3-202ENSMUST00000051430 2447 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
Smim1P0C8K7 Frmd4b-203ENSMUST00000113355 4913 ntTSL 1 (best) BASIC10.58□□□□□ -0.72
Smim1P0C8K7 Plxnc1-201ENSMUST00000099337 7302 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
Smim1P0C8K7 Myo1c-201ENSMUST00000069057 4547 ntTSL 1 (best) BASIC10.58□□□□□ -0.72
Smim1P0C8K7 Gng4-201ENSMUST00000021734 3179 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
Smim1P0C8K7 Plch2-208ENSMUST00000145662 1818 ntTSL 1 (best) BASIC10.58□□□□□ -0.72
Smim1P0C8K7 Scamp4-201ENSMUST00000079883 1804 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
Smim1P0C8K7 Hmgb3-204ENSMUST00000114582 1743 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
Smim1P0C8K7 Vwa2-201ENSMUST00000026068 4049 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
Smim1P0C8K7 Gstm4-201ENSMUST00000029489 1707 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
Smim1P0C8K7 Rsrp1-201ENSMUST00000078084 1749 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
Smim1P0C8K7 Hmgb3-203ENSMUST00000088874 1728 ntAPPRIS P1 TSL 2 BASIC10.58□□□□□ -0.72
Smim1P0C8K7 Hk2-204ENSMUST00000170833 2792 ntTSL 5 BASIC10.58□□□□□ -0.72
Smim1P0C8K7 Cep126-201ENSMUST00000037397 3819 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
Smim1P0C8K7 Gm7669-201ENSMUST00000210184 1603 ntBASIC10.58□□□□□ -0.72
Smim1P0C8K7 Gm42743-201ENSMUST00000051089 1511 ntTSL 1 (best) BASIC10.58□□□□□ -0.72
Smim1P0C8K7 Eif1ad-201ENSMUST00000025759 2469 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
Smim1P0C8K7 Tigd5-201ENSMUST00000192937 4801 ntAPPRIS P1 BASIC10.58□□□□□ -0.72
Smim1P0C8K7 Sema5b-202ENSMUST00000120756 4646 ntAPPRIS ALT2 TSL 1 (best) BASIC10.57□□□□□ -0.72
Smim1P0C8K7 4930438A08Rik-201ENSMUST00000108834 2093 ntAPPRIS P1 TSL 5 BASIC10.57□□□□□ -0.72
Smim1P0C8K7 Syndig1-201ENSMUST00000109934 2081 ntAPPRIS P1 TSL 5 BASIC10.57□□□□□ -0.72
Smim1P0C8K7 Nat6-201ENSMUST00000093785 2053 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
Smim1P0C8K7 Actg1-202ENSMUST00000071555 1952 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
Smim1P0C8K7 Parm1-201ENSMUST00000040576 5068 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
Smim1P0C8K7 Gm44645-201ENSMUST00000205492 1653 ntBASIC10.57□□□□□ -0.72
Smim1P0C8K7 Noct-203ENSMUST00000167780 2992 ntAPPRIS P2 TSL 5 BASIC10.57□□□□□ -0.72
Smim1P0C8K7 Mfrp-202ENSMUST00000161381 4254 ntAPPRIS ALT2 TSL 1 (best) BASIC10.57□□□□□ -0.72
Smim1P0C8K7 Col7a1-202ENSMUST00000112070 9250 ntAPPRIS P1 TSL 5 BASIC10.57□□□□□ -0.72
Smim1P0C8K7 Cd3eap-201ENSMUST00000047036 2239 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
Smim1P0C8K7 E130317F20Rik-202ENSMUST00000217802 3420 ntBASIC10.57□□□□□ -0.72
Smim1P0C8K7 Efemp1-201ENSMUST00000020759 2037 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
Smim1P0C8K7 Lmx1b-201ENSMUST00000041730 4790 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
Smim1P0C8K7 Tbc1d2-202ENSMUST00000107750 1941 ntTSL 1 (best) BASIC10.57□□□□□ -0.72
Smim1P0C8K7 Cdk6-201ENSMUST00000042410 2470 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
Smim1P0C8K7 N4bp3-201ENSMUST00000001080 2367 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
Smim1P0C8K7 Gm7290-201ENSMUST00000104990 617 ntBASIC10.57□□□□□ -0.72
Smim1P0C8K7 Gm12918-201ENSMUST00000120234 636 ntBASIC10.57□□□□□ -0.72
Smim1P0C8K7 Gm15710-201ENSMUST00000121821 636 ntBASIC10.57□□□□□ -0.72
Smim1P0C8K7 Gm37292-201ENSMUST00000192062 758 ntBASIC10.57□□□□□ -0.72
Smim1P0C8K7 Gm5075-201ENSMUST00000196916 622 ntBASIC10.57□□□□□ -0.72
Smim1P0C8K7 Tmbim4-201ENSMUST00000020446 904 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
Smim1P0C8K7 Gm18115-201ENSMUST00000221209 621 ntBASIC10.57□□□□□ -0.72
Smim1P0C8K7 Rpl13-ps6-201ENSMUST00000079761 636 ntBASIC10.57□□□□□ -0.72
Smim1P0C8K7 Rpl13-ps3-201ENSMUST00000079960 624 ntBASIC10.57□□□□□ -0.72
Smim1P0C8K7 Ttc32-201ENSMUST00000085741 1000 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
Smim1P0C8K7 Smn1-202ENSMUST00000091321 223 ntTSL 1 (best) BASIC10.57□□□□□ -0.72
Retrieved 100 of 76,532 protein–RNA pairs in 33.1 ms