Protein–RNA interactions for Protein: P0C090

Rc3h2, Roquin-2, mousemouse

Known RBP Predictions only

Length 1,187 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rc3h2P0C090 Nkpd1-202ENSMUST00000207576 2916 ntAPPRIS P2 TSL 5 BASIC15.61■□□□□ 0.09
Rc3h2P0C090 Wnt5b-201ENSMUST00000117171 2174 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Rc3h2P0C090 Ccdc71l-201ENSMUST00000172332 4240 ntAPPRIS P1 BASIC15.6■□□□□ 0.09
Rc3h2P0C090 Ephb4-201ENSMUST00000061244 4340 ntAPPRIS P3 TSL 1 (best) BASIC15.6■□□□□ 0.09
Rc3h2P0C090 Col4a3bp-203ENSMUST00000179226 3040 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
Rc3h2P0C090 Fbxl21-203ENSMUST00000121871 1963 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
Rc3h2P0C090 Wwox-207ENSMUST00000160862 1715 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
Rc3h2P0C090 Rabggta-203ENSMUST00000169237 2547 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Rc3h2P0C090 Wasf2-201ENSMUST00000084241 5642 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Rc3h2P0C090 Hira-202ENSMUST00000120532 2063 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
Rc3h2P0C090 Stard7-201ENSMUST00000110374 1530 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
Rc3h2P0C090 Tmem253-201ENSMUST00000100638 1234 ntAPPRIS P2 TSL 1 (best) BASIC15.6■□□□□ 0.09
Rc3h2P0C090 Gm12008-201ENSMUST00000117791 755 ntBASIC15.6■□□□□ 0.09
Rc3h2P0C090 Mir1895-201ENSMUST00000122615 79 ntBASIC15.6■□□□□ 0.09
Rc3h2P0C090 Gm15758-201ENSMUST00000161681 695 ntTSL 5 BASIC15.6■□□□□ 0.09
Rc3h2P0C090 Tmem33-206ENSMUST00000162543 664 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
Rc3h2P0C090 Hoxb8-203ENSMUST00000168043 1141 ntAPPRIS P1 TSL 5 BASIC15.6■□□□□ 0.09
Rc3h2P0C090 Rhox2a-202ENSMUST00000173650 735 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
Rc3h2P0C090 Rhox2c-204ENSMUST00000184688 720 ntTSL 5 BASIC15.6■□□□□ 0.09
Rc3h2P0C090 Gm27494-201ENSMUST00000184735 189 ntBASIC15.6■□□□□ 0.09
Rc3h2P0C090 Thap2-203ENSMUST00000218989 527 ntBASIC15.6■□□□□ 0.09
Rc3h2P0C090 Cyp2d40-201ENSMUST00000055721 1161 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Rc3h2P0C090 Tor1b-201ENSMUST00000028199 3039 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Rc3h2P0C090 Dcaf17-203ENSMUST00000112159 2490 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
Rc3h2P0C090 Aanat-205ENSMUST00000153476 1353 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Rc3h2P0C090 Col11a2-201ENSMUST00000087497 6048 ntAPPRIS P2 TSL 2 BASIC15.6■□□□□ 0.09
Rc3h2P0C090 Bnip2-202ENSMUST00000085393 2328 ntAPPRIS ALT2 TSL 1 (best) BASIC15.6■□□□□ 0.09
Rc3h2P0C090 Zdhhc18-201ENSMUST00000084238 4580 ntAPPRIS P1 TSL 2 BASIC15.6■□□□□ 0.09
Rc3h2P0C090 Susd3-202ENSMUST00000058196 1418 ntAPPRIS P3 TSL 1 (best) BASIC15.6■□□□□ 0.09
Rc3h2P0C090 P2rx4-201ENSMUST00000031429 2702 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Rc3h2P0C090 Fam133b-201ENSMUST00000115527 1491 ntAPPRIS P2 TSL 1 (best) BASIC15.59■□□□□ 0.09
Rc3h2P0C090 App-202ENSMUST00000226232 3120 ntAPPRIS ALT2 BASIC15.59■□□□□ 0.09
Rc3h2P0C090 Kifc3-212ENSMUST00000213004 2453 ntAPPRIS ALT2 TSL 1 (best) BASIC15.59■□□□□ 0.09
Rc3h2P0C090 March8-201ENSMUST00000079012 4450 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Rc3h2P0C090 Erg-207ENSMUST00000171646 1519 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
Rc3h2P0C090 Papd4-201ENSMUST00000048702 2990 ntAPPRIS P2 TSL 1 (best) BASIC15.59■□□□□ 0.09
Rc3h2P0C090 Rhot1-201ENSMUST00000017831 3029 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
Rc3h2P0C090 Slc22a1-201ENSMUST00000024596 1994 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Rc3h2P0C090 Nes-203ENSMUST00000160694 5958 ntAPPRIS ALT2 TSL 1 (best) BASIC15.59■□□□□ 0.09
Rc3h2P0C090 Gm6226-201ENSMUST00000117765 1146 ntBASIC15.59■□□□□ 0.09
Rc3h2P0C090 Pcp2-203ENSMUST00000133459 470 ntAPPRIS ALT2 TSL 1 (best) BASIC15.59■□□□□ 0.09
Rc3h2P0C090 Gm15706-201ENSMUST00000139612 899 ntTSL 2 BASIC15.59■□□□□ 0.09
Rc3h2P0C090 Gm11025-201ENSMUST00000140773 466 ntBASIC15.59■□□□□ 0.09
Rc3h2P0C090 Gm10499-201ENSMUST00000174094 934 ntBASIC15.59■□□□□ 0.09
Rc3h2P0C090 Gm44081-201ENSMUST00000204406 643 ntTSL 3 BASIC15.59■□□□□ 0.09
Rc3h2P0C090 Elof1-203ENSMUST00000213233 810 ntAPPRIS P1 TSL 3 BASIC15.59■□□□□ 0.09
Rc3h2P0C090 Gm34397-203ENSMUST00000214991 630 ntTSL 5 BASIC15.59■□□□□ 0.09
Rc3h2P0C090 9430081H08Rik-201ENSMUST00000217460 818 ntBASIC15.59■□□□□ 0.09
Rc3h2P0C090 Pcp2-201ENSMUST00000004749 495 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
Rc3h2P0C090 Fam159a-201ENSMUST00000053157 593 ntAPPRIS P1 TSL 5 BASIC15.59■□□□□ 0.09
Rc3h2P0C090 Lamtor4-201ENSMUST00000062067 877 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Rc3h2P0C090 Pard6a-202ENSMUST00000098444 1273 ntTSL 2 BASIC15.59■□□□□ 0.09
Rc3h2P0C090 Inpp5e-202ENSMUST00000114090 2790 ntAPPRIS ALT2 TSL 1 (best) BASIC15.59■□□□□ 0.09
Rc3h2P0C090 Chst3-203ENSMUST00000167915 1672 ntAPPRIS ALT2 TSL 1 (best) BASIC15.59■□□□□ 0.09
Rc3h2P0C090 Zfp691-204ENSMUST00000179290 1721 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Rc3h2P0C090 Map6-207ENSMUST00000208924 2906 ntAPPRIS ALT2 TSL 1 (best) BASIC15.59■□□□□ 0.09
Rc3h2P0C090 Emx2-201ENSMUST00000062216 2916 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Rc3h2P0C090 Soga3-201ENSMUST00000092629 4105 ntAPPRIS P1 TSL 5 BASIC15.59■□□□□ 0.09
Rc3h2P0C090 Grm4-201ENSMUST00000118161 4537 ntAPPRIS P1 TSL 5 BASIC15.59■□□□□ 0.09
Rc3h2P0C090 Gm45723-201ENSMUST00000212135 1783 ntTSL 5 BASIC15.59■□□□□ 0.09
Rc3h2P0C090 Gm2109-201ENSMUST00000189326 1409 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
Rc3h2P0C090 Chuk-202ENSMUST00000119591 3481 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
Rc3h2P0C090 Rnf170-209ENSMUST00000209300 1881 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
Rc3h2P0C090 Gm13425-201ENSMUST00000145389 5391 ntTSL 3 BASIC15.58■□□□□ 0.09
Rc3h2P0C090 Tnfsf13-202ENSMUST00000108648 1503 ntAPPRIS ALT2 TSL 5 BASIC15.58■□□□□ 0.09
Rc3h2P0C090 Mapk8ip2-201ENSMUST00000023291 5558 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.09
Rc3h2P0C090 Runx2-203ENSMUST00000113572 6463 ntAPPRIS ALT2 TSL 1 (best) BASIC15.58■□□□□ 0.09
Rc3h2P0C090 Mapk8ip1-201ENSMUST00000050312 2930 ntAPPRIS P3 TSL 1 (best) BASIC15.58■□□□□ 0.09
Rc3h2P0C090 Capn15-205ENSMUST00000212520 5216 ntAPPRIS ALT2 TSL 1 (best) BASIC15.58■□□□□ 0.09
Rc3h2P0C090 AL691505.1-201ENSMUST00000219965 1618 ntTSL 5 BASIC15.58■□□□□ 0.09
Rc3h2P0C090 Pias4-201ENSMUST00000005064 2571 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.09
Rc3h2P0C090 Plekha4-207ENSMUST00000211227 2133 ntAPPRIS ALT2 TSL 1 (best) BASIC15.58■□□□□ 0.08
Rc3h2P0C090 Loxl4-205ENSMUST00000171432 2274 ntAPPRIS P3 TSL 1 (best) BASIC15.58■□□□□ 0.08
Rc3h2P0C090 H2-Q4-201ENSMUST00000081435 1793 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
Rc3h2P0C090 Cldn25-ps-201ENSMUST00000197641 693 ntBASIC15.58■□□□□ 0.08
Rc3h2P0C090 Gm45612-201ENSMUST00000211320 160 ntBASIC15.58■□□□□ 0.08
Rc3h2P0C090 Snrnp25-201ENSMUST00000039601 821 ntAPPRIS P2 TSL 1 (best) BASIC15.58■□□□□ 0.08
Rc3h2P0C090 Atp6v0c-202ENSMUST00000098862 796 ntAPPRIS P1 TSL 2 BASIC15.58■□□□□ 0.08
Rc3h2P0C090 Shank1-201ENSMUST00000107934 6477 ntAPPRIS ALT2 TSL 5 BASIC15.58■□□□□ 0.08
Rc3h2P0C090 Eda-209ENSMUST00000113783 4930 ntTSL 5 BASIC15.58■□□□□ 0.08
Rc3h2P0C090 6430548M08Rik-204ENSMUST00000108951 5531 ntAPPRIS ALT2 TSL 1 (best) BASIC15.58■□□□□ 0.08
Rc3h2P0C090 Osbpl1a-206ENSMUST00000121774 2931 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
Rc3h2P0C090 Chrd-202ENSMUST00000115423 2417 ntTSL 2 BASIC15.58■□□□□ 0.08
Rc3h2P0C090 Ankrd23-201ENSMUST00000054665 1964 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
Rc3h2P0C090 Camk2b-205ENSMUST00000093355 1973 ntTSL 5 BASIC15.58■□□□□ 0.08
Rc3h2P0C090 Ankrd13b-201ENSMUST00000037593 3105 ntAPPRIS ALT2 TSL 1 (best) BASIC15.58■□□□□ 0.08
Rc3h2P0C090 Matn1-201ENSMUST00000102576 2001 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
Rc3h2P0C090 Noc4l-201ENSMUST00000042147 2075 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
Rc3h2P0C090 Pcdha9-201ENSMUST00000115659 5341 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
Rc3h2P0C090 Mllt10-204ENSMUST00000114680 3543 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Rc3h2P0C090 Trim8-201ENSMUST00000026008 3230 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Rc3h2P0C090 Gfm2-211ENSMUST00000161913 1829 ntTSL 2 BASIC15.57■□□□□ 0.08
Rc3h2P0C090 Pfn2-203ENSMUST00000120289 905 ntTSL 2 BASIC15.57■□□□□ 0.08
Rc3h2P0C090 Ftl1-ps1-202ENSMUST00000222435 938 ntAPPRIS P1 BASIC15.57■□□□□ 0.08
Rc3h2P0C090 AC155252.2-201ENSMUST00000226946 680 ntBASIC15.57■□□□□ 0.08
Rc3h2P0C090 Crygn-201ENSMUST00000047119 768 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Rc3h2P0C090 Chchd10-201ENSMUST00000058906 939 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Rc3h2P0C090 Ankrd44-210ENSMUST00000179030 6140 ntAPPRIS P2 TSL 1 (best) BASIC15.57■□□□□ 0.08
Rc3h2P0C090 Map1s-201ENSMUST00000019405 3314 ntAPPRIS P2 TSL 1 (best) BASIC15.57■□□□□ 0.08
Rc3h2P0C090 Cdh24-201ENSMUST00000067784 3489 ntAPPRIS P1 TSL 5 BASIC15.57■□□□□ 0.08
Retrieved 100 of 76,532 protein–RNA pairs in 20.8 ms