Protein–RNA interactions for Protein: P04945

Ig kappa chain V-VI region NQ2-6.1, mousemouse

Predictions only

Length 108 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
P04945 4933426K07Rik-201ENSMUST00000143009 1548 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
P04945 Aarsd1-201ENSMUST00000070395 1516 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
P04945 Rb1-201ENSMUST00000022701 4656 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
P04945 Agfg1-206ENSMUST00000189220 8044 ntAPPRIS P2 TSL 1 (best) BASIC13.13□□□□□ -0.31
P04945 Rflna-203ENSMUST00000197746 1649 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
P04945 2210011K15Rik-201ENSMUST00000190690 1741 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
P04945 Cyp2a5-201ENSMUST00000005685 2013 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
P04945 Slc52a3-203ENSMUST00000109859 2204 ntTSL 5 BASIC13.13□□□□□ -0.31
P04945 Pogk-204ENSMUST00000135673 2433 ntAPPRIS ALT2 TSL 1 (best) BASIC13.13□□□□□ -0.31
P04945 Cct7-201ENSMUST00000032078 2441 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
P04945 Patz1-201ENSMUST00000057089 3118 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
P04945 D1Pas1-201ENSMUST00000045108 3212 ntAPPRIS P1 BASIC13.13□□□□□ -0.31
P04945 Tal1-201ENSMUST00000030489 4213 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
P04945 Zfp710-201ENSMUST00000049680 4721 ntAPPRIS P4 TSL 1 (best) BASIC13.13□□□□□ -0.31
P04945 Usp4-201ENSMUST00000035237 3662 ntAPPRIS P3 TSL 1 (best) BASIC13.13□□□□□ -0.31
P04945 Mapk8ip1-202ENSMUST00000111279 3274 ntAPPRIS ALT2 TSL 1 (best) BASIC13.13□□□□□ -0.31
P04945 Zfp410-201ENSMUST00000045931 2597 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
P04945 Sra1-205ENSMUST00000173875 2360 ntAPPRIS ALT2 TSL 1 (best) BASIC13.13□□□□□ -0.31
P04945 Rhpn1-202ENSMUST00000121137 2283 ntAPPRIS ALT2 TSL 1 (best) BASIC13.13□□□□□ -0.31
P04945 Rai2-202ENSMUST00000112338 2165 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
P04945 Gm16565-201ENSMUST00000159138 2181 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
P04945 Hars-201ENSMUST00000001416 1987 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
P04945 Gmpr2-201ENSMUST00000002397 1993 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
P04945 Nlk-201ENSMUST00000142739 4444 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
P04945 Gpr142-202ENSMUST00000106584 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC13.13□□□□□ -0.31
P04945 Gm18489-201ENSMUST00000172565 551 ntBASIC13.13□□□□□ -0.31
P04945 Gm43347-201ENSMUST00000200226 580 ntBASIC13.13□□□□□ -0.31
P04945 AC148328.1-201ENSMUST00000216448 920 ntTSL 5 BASIC13.13□□□□□ -0.31
P04945 Atp5o-201ENSMUST00000023677 838 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
P04945 Gpr142-201ENSMUST00000045319 1098 ntAPPRIS P3 TSL 1 (best) BASIC13.13□□□□□ -0.31
P04945 Prdx6-201ENSMUST00000051925 959 ntTSL 2 BASIC13.13□□□□□ -0.31
P04945 Sdhc-201ENSMUST00000081560 815 ntTSL 3 BASIC13.13□□□□□ -0.31
P04945 Atp2c2-201ENSMUST00000095171 3222 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
P04945 Smad3-201ENSMUST00000034973 5090 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
P04945 Sybu-203ENSMUST00000110269 2920 ntAPPRIS ALT2 TSL 1 (best) BASIC13.13□□□□□ -0.31
P04945 Fam8a1-201ENSMUST00000099547 3664 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
P04945 Dvl2-207ENSMUST00000190940 5037 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
P04945 Hsd3b7-202ENSMUST00000106271 1713 ntTSL 5 BASIC13.13□□□□□ -0.31
P04945 C130073E24Rik-201ENSMUST00000210222 6144 ntTSL 5 BASIC13.13□□□□□ -0.31
P04945 Ppfia3-207ENSMUST00000211067 4565 ntAPPRIS P1 TSL 5 BASIC13.13□□□□□ -0.31
P04945 Sirt5-206ENSMUST00000221481 1548 ntTSL 5 BASIC13.13□□□□□ -0.31
P04945 Clns1a-201ENSMUST00000026506 1504 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
P04945 Cds2-202ENSMUST00000103181 8396 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
P04945 Penk-201ENSMUST00000070375 1449 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
P04945 9130401M01Rik-201ENSMUST00000100655 1341 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
P04945 Map3k3-201ENSMUST00000002044 3450 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
P04945 Plxnd1-201ENSMUST00000015511 6907 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
P04945 Ydjc-203ENSMUST00000115706 3097 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
P04945 Ccdc43-205ENSMUST00000164506 2316 ntAPPRIS ALT1 TSL 5 BASIC13.12□□□□□ -0.31
P04945 Hnrnpm-201ENSMUST00000087582 2339 ntAPPRIS ALT2 TSL 1 (best) BASIC13.12□□□□□ -0.31
P04945 Snph-203ENSMUST00000109875 4910 ntAPPRIS P3 TSL 1 (best) BASIC13.12□□□□□ -0.31
P04945 Synrg-201ENSMUST00000049714 3995 ntAPPRIS ALT2 TSL 5 BASIC13.12□□□□□ -0.31
P04945 Wdr1-205ENSMUST00000201260 2139 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
P04945 Gm38575-203ENSMUST00000215824 1490 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
P04945 Srcin1-203ENSMUST00000107596 7054 ntAPPRIS P2 TSL 1 (best) BASIC13.12□□□□□ -0.31
P04945 Cstf2-203ENSMUST00000113287 3661 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
P04945 8030474K03Rik-202ENSMUST00000151231 1940 ntAPPRIS P1 TSL 5 BASIC13.12□□□□□ -0.31
P04945 Fam161a-205ENSMUST00000172602 1935 ntAPPRIS P1 TSL 2 BASIC13.12□□□□□ -0.31
P04945 Ebag9-202ENSMUST00000226165 1931 ntAPPRIS P1 BASIC13.12□□□□□ -0.31
P04945 Tpm3-205ENSMUST00000121503 1139 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
P04945 1700023H06Rik-201ENSMUST00000161006 1044 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
P04945 Abhd18-206ENSMUST00000203650 797 ntTSL 5 BASIC13.12□□□□□ -0.31
P04945 Hmgb1-rs17-201ENSMUST00000210634 972 ntBASIC13.12□□□□□ -0.31
P04945 Vcan-205ENSMUST00000159337 2273 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
P04945 Wipf3-204ENSMUST00000132855 4516 ntAPPRIS P4 TSL 5 BASIC13.12□□□□□ -0.31
P04945 Atp6v0d1-201ENSMUST00000013304 1629 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
P04945 Pqlc1-204ENSMUST00000129043 1864 ntAPPRIS ALT2 TSL 1 (best) BASIC13.12□□□□□ -0.31
P04945 Gtf2h5-201ENSMUST00000039487 2245 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
P04945 4933415F23Rik-201ENSMUST00000073179 1781 ntAPPRIS P1 BASIC13.12□□□□□ -0.31
P04945 Chn1-203ENSMUST00000112024 4050 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
P04945 Chn1-210ENSMUST00000180045 4050 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
P04945 Cttn-202ENSMUST00000103079 3286 ntAPPRIS P3 TSL 1 (best) BASIC13.12□□□□□ -0.31
P04945 Psen2-204ENSMUST00000111106 2020 ntAPPRIS P2 TSL 5 BASIC13.12□□□□□ -0.31
P04945 Ttc16-202ENSMUST00000091059 2388 ntAPPRIS ALT2 TSL 1 (best) BASIC13.12□□□□□ -0.31
P04945 Fbxl8-201ENSMUST00000036221 1901 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
P04945 Ren1-201ENSMUST00000094556 1592 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
P04945 Sfta3-ps-205ENSMUST00000220379 2187 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
P04945 Ppm1m-201ENSMUST00000076258 1811 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
P04945 Nrip2-202ENSMUST00000120405 1468 ntTSL 2 BASIC13.11□□□□□ -0.31
P04945 Tm4sf4-201ENSMUST00000029377 1496 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
P04945 Celf4-206ENSMUST00000224553 1729 ntBASIC13.11□□□□□ -0.31
P04945 Acvr2a-201ENSMUST00000063886 5686 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
P04945 Slc46a3-202ENSMUST00000118527 2210 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
P04945 Dzip3-201ENSMUST00000114516 3331 ntAPPRIS P3 TSL 1 (best) BASIC13.11□□□□□ -0.31
P04945 Arf3-201ENSMUST00000053183 3579 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
P04945 Nfs1-202ENSMUST00000109600 709 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
P04945 Hoxd3-203ENSMUST00000111983 2968 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
P04945 Emp3-202ENSMUST00000164119 784 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
P04945 Cklf-201ENSMUST00000034342 667 ntAPPRIS P4 TSL 1 (best) BASIC13.11□□□□□ -0.31
P04945 Sfxn5-202ENSMUST00000059034 1081 ntAPPRIS ALT2 TSL 1 (best) BASIC13.11□□□□□ -0.31
P04945 A330070K13Rik-201ENSMUST00000063656 633 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
P04945 Rps4l-201ENSMUST00000071745 943 ntBASIC13.11□□□□□ -0.31
P04945 Kdm2a-202ENSMUST00000075856 7242 ntAPPRIS P1 TSL 5 BASIC13.11□□□□□ -0.31
P04945 Sphk1-211ENSMUST00000141798 1532 ntAPPRIS P4 TSL 1 (best) BASIC13.11□□□□□ -0.31
P04945 Atf7-202ENSMUST00000108828 2887 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
P04945 Sgsm2-201ENSMUST00000057631 4743 ntAPPRIS P2 TSL 1 (best) BASIC13.11□□□□□ -0.31
P04945 Gm29676-201ENSMUST00000222396 1689 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
P04945 Slit1-201ENSMUST00000025993 5045 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
P04945 Tmem82-201ENSMUST00000053263 1671 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
P04945 Gm5357-201ENSMUST00000212720 1924 ntBASIC13.11□□□□□ -0.31
Retrieved 100 of 76,532 protein–RNA pairs in 30.8 ms