Protein–RNA interactions for Protein: P02463

Col4a1, Collagen alpha-1(IV) chain, mousemouse

Predictions only

Length 1,669 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col4a1P02463 Maged1-201ENSMUST00000026142 2821 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Col4a1P02463 Fgf13-203ENSMUST00000119833 2237 ntTSL 5 BASIC18.66■□□□□ 0.58
Col4a1P02463 Gm8410-201ENSMUST00000117225 605 ntBASIC18.66■□□□□ 0.58
Col4a1P02463 Gm18737-201ENSMUST00000173594 937 ntBASIC18.66■□□□□ 0.58
Col4a1P02463 Mir7684-201ENSMUST00000183858 60 ntBASIC18.66■□□□□ 0.58
Col4a1P02463 1700021A07Rik-203ENSMUST00000188024 404 ntTSL 3 BASIC18.66■□□□□ 0.58
Col4a1P02463 Gm37596-201ENSMUST00000193565 1021 ntAPPRIS P1 BASIC18.66■□□□□ 0.58
Col4a1P02463 Gm18049-201ENSMUST00000208909 581 ntBASIC18.66■□□□□ 0.58
Col4a1P02463 Rab33a-201ENSMUST00000033430 1158 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Col4a1P02463 Hfe-201ENSMUST00000006787 516 ntTSL 5 BASIC18.66■□□□□ 0.58
Col4a1P02463 Hfe-203ENSMUST00000091707 816 ntTSL 5 BASIC18.66■□□□□ 0.58
Col4a1P02463 Gal3st1-203ENSMUST00000109981 1600 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Col4a1P02463 Ppef2-201ENSMUST00000031359 2274 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Col4a1P02463 Nadk2-203ENSMUST00000100790 3665 ntAPPRIS ALT2 TSL 5 BASIC18.66■□□□□ 0.58
Col4a1P02463 Fam193a-202ENSMUST00000180376 5536 ntAPPRIS P5 TSL 5 BASIC18.66■□□□□ 0.58
Col4a1P02463 Cdh24-201ENSMUST00000067784 3489 ntAPPRIS P1 TSL 5 BASIC18.66■□□□□ 0.58
Col4a1P02463 Ehmt2-204ENSMUST00000114033 3882 ntAPPRIS ALT2 TSL 1 (best) BASIC18.66■□□□□ 0.58
Col4a1P02463 Tvp23b-201ENSMUST00000014321 1784 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Col4a1P02463 Gm26681-201ENSMUST00000180851 1440 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
Col4a1P02463 Gm45351-201ENSMUST00000210683 2545 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
Col4a1P02463 Dars-201ENSMUST00000027602 2175 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Col4a1P02463 Nap1l5-201ENSMUST00000059539 1844 ntAPPRIS P1 BASIC18.66■□□□□ 0.58
Col4a1P02463 Cdk2-201ENSMUST00000026415 2240 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Col4a1P02463 Gm45412-201ENSMUST00000210217 2275 ntBASIC18.66■□□□□ 0.58
Col4a1P02463 Nap1l1-208ENSMUST00000219961 1512 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
Col4a1P02463 Ccnb2-201ENSMUST00000034742 1531 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Col4a1P02463 Sdc1-205ENSMUST00000171158 2311 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Col4a1P02463 Ghdc-201ENSMUST00000017891 2462 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Col4a1P02463 Vps51-201ENSMUST00000025711 2489 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Col4a1P02463 Msmp-201ENSMUST00000107884 743 ntAPPRIS P1 TSL 3 BASIC18.66■□□□□ 0.58
Col4a1P02463 Gm15384-201ENSMUST00000138832 486 ntTSL 5 BASIC18.66■□□□□ 0.58
Col4a1P02463 Gm4691-201ENSMUST00000182339 1000 ntBASIC18.66■□□□□ 0.58
Col4a1P02463 Gm2451-201ENSMUST00000199447 999 ntBASIC18.66■□□□□ 0.58
Col4a1P02463 Gm10290-201ENSMUST00000200451 999 ntBASIC18.66■□□□□ 0.58
Col4a1P02463 Otp-201ENSMUST00000022195 2656 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Col4a1P02463 Csnk1e-202ENSMUST00000120859 1391 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Col4a1P02463 Gm8242-201ENSMUST00000193029 1420 ntBASIC18.65■□□□□ 0.58
Col4a1P02463 Gm3373-202ENSMUST00000177556 1955 ntAPPRIS P5 TSL 5 BASIC18.65■□□□□ 0.58
Col4a1P02463 Gm3500-201ENSMUST00000177986 1955 ntAPPRIS P1 TSL 5 BASIC18.65■□□□□ 0.58
Col4a1P02463 Krt42-201ENSMUST00000017270 1542 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Col4a1P02463 Tatdn2-205ENSMUST00000204753 2645 ntAPPRIS ALT2 TSL 1 (best) BASIC18.65■□□□□ 0.58
Col4a1P02463 Tle2-205ENSMUST00000135211 2746 ntAPPRIS ALT2 TSL 1 (best) BASIC18.65■□□□□ 0.58
Col4a1P02463 Clvs2-201ENSMUST00000019920 2717 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Col4a1P02463 4930431F12Rik-202ENSMUST00000199309 2263 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
Col4a1P02463 D11Bhm181e-201ENSMUST00000122252 282 ntBASIC18.65■□□□□ 0.58
Col4a1P02463 Cyba-201ENSMUST00000017604 744 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Col4a1P02463 Ndufv3-205ENSMUST00000191598 642 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
Col4a1P02463 Gm43703-201ENSMUST00000200523 763 ntBASIC18.65■□□□□ 0.58
Col4a1P02463 Fam102b-202ENSMUST00000171143 5702 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Col4a1P02463 Gm13517-201ENSMUST00000120782 1495 ntBASIC18.65■□□□□ 0.58
Col4a1P02463 Tbc1d19-201ENSMUST00000037337 2273 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Col4a1P02463 Ubap1-202ENSMUST00000108060 2514 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
Col4a1P02463 Fam219b-202ENSMUST00000114200 3017 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.58
Col4a1P02463 Ghr-203ENSMUST00000110698 1171 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
Col4a1P02463 Gm27989-201ENSMUST00000184721 107 ntBASIC18.64■□□□□ 0.57
Col4a1P02463 2410002F23Rik-214ENSMUST00000186606 748 ntAPPRIS ALT2 TSL 5 BASIC18.64■□□□□ 0.57
Col4a1P02463 Rpl32-202ENSMUST00000203816 906 ntAPPRIS P1 TSL 2 BASIC18.64■□□□□ 0.57
Col4a1P02463 Bet1l-209ENSMUST00000211624 769 ntTSL 3 BASIC18.64■□□□□ 0.57
Col4a1P02463 Polr2j-201ENSMUST00000041366 646 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Col4a1P02463 Capg-203ENSMUST00000114072 1388 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Col4a1P02463 Gale-201ENSMUST00000102540 1537 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Col4a1P02463 Tm9sf3-201ENSMUST00000025989 6144 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Col4a1P02463 AC163637.1-201ENSMUST00000215491 1894 ntBASIC18.64■□□□□ 0.57
Col4a1P02463 Aste1-202ENSMUST00000123807 2349 ntAPPRIS ALT2 TSL 2 BASIC18.64■□□□□ 0.57
Col4a1P02463 Esr1-202ENSMUST00000105588 2733 ntTSL 5 BASIC18.64■□□□□ 0.57
Col4a1P02463 Lzts2-201ENSMUST00000039016 2825 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Col4a1P02463 Arsi-201ENSMUST00000040359 2975 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Col4a1P02463 4930417O22Rik-201ENSMUST00000123249 1184 ntTSL 2 BASIC18.63■□□□□ 0.57
Col4a1P02463 Rrnad1-206ENSMUST00000160074 1620 ntTSL 5 BASIC18.63■□□□□ 0.57
Col4a1P02463 Pkig-209ENSMUST00000164399 983 ntAPPRIS P1 TSL 2 BASIC18.63■□□□□ 0.57
Col4a1P02463 Gltpd2-202ENSMUST00000179000 794 ntAPPRIS ALT2 TSL 2 BASIC18.63■□□□□ 0.57
Col4a1P02463 Gm25144-201ENSMUST00000179561 110 ntBASIC18.63■□□□□ 0.57
Col4a1P02463 Gm25352-201ENSMUST00000179815 110 ntBASIC18.63■□□□□ 0.57
Col4a1P02463 Gm26839-201ENSMUST00000180686 842 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
Col4a1P02463 Gm26688-201ENSMUST00000181176 1568 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
Col4a1P02463 Psmd8-202ENSMUST00000182328 1391 ntAPPRIS ALT2 TSL 1 (best) BASIC18.63■□□□□ 0.57
Col4a1P02463 Gm5745-201ENSMUST00000183748 313 ntBASIC18.63■□□□□ 0.57
Col4a1P02463 Gm42466-201ENSMUST00000202099 1301 ntBASIC18.63■□□□□ 0.57
Col4a1P02463 Gm15406-202ENSMUST00000202229 767 ntTSL 2 BASIC18.63■□□□□ 0.57
Col4a1P02463 Pim2-204ENSMUST00000223553 1113 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Col4a1P02463 Dnlz-201ENSMUST00000028295 2916 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Col4a1P02463 Bend5-201ENSMUST00000030274 1826 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Col4a1P02463 Spg21-201ENSMUST00000034955 2680 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Col4a1P02463 Zswim7-201ENSMUST00000072916 732 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Col4a1P02463 Zscan12-202ENSMUST00000099720 2182 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Col4a1P02463 Kctd1-202ENSMUST00000168989 3456 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Col4a1P02463 Nsg2-201ENSMUST00000020537 2239 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Col4a1P02463 Spire2-202ENSMUST00000212404 2158 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
Col4a1P02463 Agbl5-202ENSMUST00000114700 3296 ntAPPRIS ALT2 TSL 1 (best) BASIC18.63■□□□□ 0.57
Col4a1P02463 Rsu1-202ENSMUST00000114791 1604 ntTSL 5 BASIC18.63■□□□□ 0.57
Col4a1P02463 Kat8-201ENSMUST00000033070 1579 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Col4a1P02463 Mal-202ENSMUST00000028854 2778 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Col4a1P02463 Gm16137-201ENSMUST00000161571 664 ntTSL 5 BASIC18.63■□□□□ 0.57
Col4a1P02463 Gm44855-201ENSMUST00000205725 362 ntBASIC18.63■□□□□ 0.57
Col4a1P02463 Nradd-201ENSMUST00000035069 1223 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Col4a1P02463 Gm17315-201ENSMUST00000181408 2504 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
Col4a1P02463 Slc35e1-202ENSMUST00000152080 4383 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Col4a1P02463 Kcnc3-202ENSMUST00000107907 5281 ntAPPRIS P2 TSL 5 BASIC18.62■□□□□ 0.57
Col4a1P02463 Diaph2-201ENSMUST00000037854 3742 ntAPPRIS P2 TSL 1 (best) BASIC18.62■□□□□ 0.57
Col4a1P02463 Kdelc2-201ENSMUST00000037853 3642 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Retrieved 100 of 76,532 protein–RNA pairs in 41.2 ms