Protein–RNA interactions for Protein: P01852

T-cell receptor beta-1 chain C region, mousemouse

Predictions only

Length 173 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
P01852 Gm12350-201ENSMUST00000121208 462 ntBASIC14.04□□□□□ -0.16
P01852 Gm2308-201ENSMUST00000166539 1004 ntBASIC14.04□□□□□ -0.16
P01852 Cyhr1-204ENSMUST00000177359 1110 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
P01852 Il3ra-205ENSMUST00000224877 1128 ntAPPRIS ALT2 BASIC14.04□□□□□ -0.16
P01852 Sod1-201ENSMUST00000023707 646 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
P01852 Psma5-201ENSMUST00000090569 1239 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
P01852 Terf1-203ENSMUST00000188371 2268 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
P01852 Zfp36l3-201ENSMUST00000071711 2347 ntAPPRIS P1 BASIC14.04□□□□□ -0.16
P01852 Gm32369-201ENSMUST00000222630 1467 ntTSL 5 BASIC14.04□□□□□ -0.16
P01852 Golph3-201ENSMUST00000059680 2652 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
P01852 Bptf-201ENSMUST00000057892 11488 ntAPPRIS P2 TSL 5 BASIC14.04□□□□□ -0.16
P01852 Gpr135-201ENSMUST00000050649 3150 ntAPPRIS P1 BASIC14.04□□□□□ -0.16
P01852 Fam161a-205ENSMUST00000172602 1935 ntAPPRIS P1 TSL 2 BASIC14.03□□□□□ -0.16
P01852 Rhot1-203ENSMUST00000077451 3297 ntAPPRIS ALT2 TSL 5 BASIC14.03□□□□□ -0.16
P01852 Plch2-212ENSMUST00000186598 2119 ntTSL 5 BASIC14.03□□□□□ -0.16
P01852 Rexo4-201ENSMUST00000064244 2281 ntAPPRIS ALT2 TSL 1 (best) BASIC14.03□□□□□ -0.16
P01852 Lrrc56-203ENSMUST00000084446 2390 ntAPPRIS ALT2 TSL 1 (best) BASIC14.03□□□□□ -0.16
P01852 Pdzd4-201ENSMUST00000002080 3970 ntAPPRIS P3 TSL 1 (best) BASIC14.03□□□□□ -0.16
P01852 Sp8-201ENSMUST00000063918 4478 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
P01852 Cant1-204ENSMUST00000106288 2873 ntAPPRIS P1 TSL 5 BASIC14.03□□□□□ -0.16
P01852 Gm11764-201ENSMUST00000120221 623 ntBASIC14.03□□□□□ -0.16
P01852 9130019P16Rik-201ENSMUST00000135612 1019 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
P01852 Hmgb1-208ENSMUST00000139443 923 ntTSL 2 BASIC14.03□□□□□ -0.16
P01852 1700039E22Rik-201ENSMUST00000174082 770 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
P01852 Flg-204ENSMUST00000178752 756 ntAPPRIS ALT2 BASIC14.03□□□□□ -0.16
P01852 Gm26664-201ENSMUST00000181140 705 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
P01852 Cort-201ENSMUST00000030815 677 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
P01852 Pus1-204ENSMUST00000112426 1389 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
P01852 4933433G15Rik-201ENSMUST00000180533 1481 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
P01852 Inhbc-201ENSMUST00000026472 1859 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
P01852 Sgta-202ENSMUST00000218208 1964 ntAPPRIS ALT1 TSL 1 (best) BASIC14.03□□□□□ -0.16
P01852 Celf3-204ENSMUST00000197558 2414 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
P01852 Rabggta-203ENSMUST00000169237 2547 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
P01852 Slc3a2-202ENSMUST00000170157 2813 ntAPPRIS ALT2 TSL 1 (best) BASIC14.03□□□□□ -0.16
P01852 1700066M21Rik-201ENSMUST00000042734 3008 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
P01852 Pfkfb4-203ENSMUST00000198140 3488 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
P01852 Asic1-201ENSMUST00000023758 4114 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
P01852 Pgm2l1-202ENSMUST00000084935 8834 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
P01852 Magi1-201ENSMUST00000055224 7007 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
P01852 Wnk2-207ENSMUST00000159559 6584 ntAPPRIS ALT2 TSL 5 BASIC14.02□□□□□ -0.16
P01852 Pcdha2-201ENSMUST00000115662 5361 ntAPPRIS P2 TSL 1 (best) BASIC14.02□□□□□ -0.16
P01852 Zhx1-201ENSMUST00000070143 4764 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
P01852 Bnc1-201ENSMUST00000026096 4646 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
P01852 Kmt5b-213ENSMUST00000176262 3933 ntAPPRIS P3 TSL 5 BASIC14.02□□□□□ -0.16
P01852 D17Wsu92e-202ENSMUST00000114859 3522 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.16
P01852 Sybu-201ENSMUST00000090057 3230 ntAPPRIS P4 TSL 1 (best) BASIC14.02□□□□□ -0.16
P01852 Cyb5r3-201ENSMUST00000018186 2422 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
P01852 Kif12-205ENSMUST00000156618 2258 ntAPPRIS ALT2 TSL 5 BASIC14.02□□□□□ -0.16
P01852 Vill-207ENSMUST00000141185 1645 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
P01852 Gm7669-201ENSMUST00000210184 1603 ntBASIC14.02□□□□□ -0.16
P01852 Atp6v1c2-201ENSMUST00000020884 1569 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
P01852 Gjb1-201ENSMUST00000052130 1565 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
P01852 Iqcd-201ENSMUST00000069259 1577 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.16
P01852 Ppil1-201ENSMUST00000024802 1434 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
P01852 Psmc4-201ENSMUST00000032824 1440 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
P01852 Sympk-201ENSMUST00000023882 4116 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
P01852 Gm13403-202ENSMUST00000134271 674 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
P01852 BC022687-202ENSMUST00000177808 1207 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
P01852 Gm40977-203ENSMUST00000222324 886 ntTSL 2 BASIC14.02□□□□□ -0.17
P01852 Wdyhv1-204ENSMUST00000226955 1094 ntBASIC14.02□□□□□ -0.17
P01852 Atp5o-201ENSMUST00000023677 838 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
P01852 Mrpl34-201ENSMUST00000048914 607 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
P01852 Rhox6-201ENSMUST00000006362 1010 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
P01852 Gm9925-201ENSMUST00000066583 483 ntAPPRIS P1 BASIC14.02□□□□□ -0.17
P01852 Hsph1-209ENSMUST00000202089 3054 ntTSL 5 BASIC14.02□□□□□ -0.17
P01852 Esr1-203ENSMUST00000105589 2612 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
P01852 Pde4d-208ENSMUST00000120671 2455 ntTSL 5 BASIC14.02□□□□□ -0.17
P01852 Ehd4-201ENSMUST00000028755 3730 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
P01852 Myc-202ENSMUST00000159327 2186 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
P01852 Rnf145-201ENSMUST00000019333 3570 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
P01852 Col13a1-205ENSMUST00000105454 3162 ntAPPRIS P2 TSL 1 (best) BASIC14.02□□□□□ -0.17
P01852 Cyp2f2-201ENSMUST00000003100 1866 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
P01852 Pde4b-208ENSMUST00000106911 3020 ntAPPRIS ALT1 TSL 5 BASIC14.01□□□□□ -0.17
P01852 Neu4-202ENSMUST00000190212 1719 ntAPPRIS ALT2 TSL 1 (best) BASIC14.01□□□□□ -0.17
P01852 Lmcd1-201ENSMUST00000032376 1730 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
P01852 Hacd3-201ENSMUST00000036615 2709 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
P01852 Ubp1-206ENSMUST00000216558 1623 ntAPPRIS P4 TSL 1 (best) BASIC14.01□□□□□ -0.17
P01852 Entpd6-201ENSMUST00000094467 2540 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
P01852 Gm26666-201ENSMUST00000180763 2461 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
P01852 Dhodh-209ENSMUST00000143900 1455 ntTSL 5 BASIC14.01□□□□□ -0.17
P01852 Gm38575-203ENSMUST00000215824 1490 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
P01852 A230072C01Rik-202ENSMUST00000136447 1412 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
P01852 P2rx6-203ENSMUST00000171002 1353 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
P01852 Bag4-201ENSMUST00000038498 4876 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
P01852 Marveld3-201ENSMUST00000001722 1330 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
P01852 Phospho2-202ENSMUST00000112266 2194 ntAPPRIS P1 TSL 3 BASIC14.01□□□□□ -0.17
P01852 Myh14-204ENSMUST00000207775 6499 ntAPPRIS ALT2 TSL 5 BASIC14.01□□□□□ -0.17
P01852 Gm6184-201ENSMUST00000120403 1261 ntBASIC14.01□□□□□ -0.17
P01852 Gm17114-201ENSMUST00000164716 511 ntTSL 3 BASIC14.01□□□□□ -0.17
P01852 Timm23-206ENSMUST00000170331 777 ntTSL 3 BASIC14.01□□□□□ -0.17
P01852 Gm26695-201ENSMUST00000180920 1251 ntTSL 5 BASIC14.01□□□□□ -0.17
P01852 Gm20324-201ENSMUST00000186291 1118 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
P01852 Gm37153-201ENSMUST00000193637 231 ntBASIC14.01□□□□□ -0.17
P01852 Gm19710-202ENSMUST00000200320 493 ntTSL 3 BASIC14.01□□□□□ -0.17
P01852 Shisa5-218ENSMUST00000200515 1005 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
P01852 Tmem270-202ENSMUST00000201316 847 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
P01852 Mrpl54-201ENSMUST00000046114 604 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
P01852 Cdhr5-201ENSMUST00000080654 2133 ntAPPRIS P3 TSL 1 (best) BASIC14.01□□□□□ -0.17
P01852 Wtap-201ENSMUST00000007007 2051 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
P01852 Slc22a7-201ENSMUST00000087012 2007 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Retrieved 100 of 76,532 protein–RNA pairs in 45.7 ms