Protein–RNA interactions for Protein: P01572

Ifna1, Interferon alpha-1, mousemouse

Predictions only

Length 189 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ifna1P01572 Gm20422-202ENSMUST00000149782 956 ntTSL 2 BASIC12.96□□□□□ -0.33
Ifna1P01572 Nnat-206ENSMUST00000172487 404 ntTSL 5 BASIC12.96□□□□□ -0.33
Ifna1P01572 E2f7-205ENSMUST00000173634 827 ntTSL 2 BASIC12.96□□□□□ -0.33
Ifna1P01572 6530437J22Rik-201ENSMUST00000207515 773 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
Ifna1P01572 Stard10-211ENSMUST00000210192 1258 ntAPPRIS P1 TSL 5 BASIC12.96□□□□□ -0.33
Ifna1P01572 Stum-205ENSMUST00000211561 1063 ntAPPRIS ALT1 TSL 5 BASIC12.96□□□□□ -0.33
Ifna1P01572 AC156576.2-201ENSMUST00000222752 503 ntTSL 5 BASIC12.96□□□□□ -0.33
Ifna1P01572 Cadm1-201ENSMUST00000034581 1254 ntAPPRIS ALT1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Ifna1P01572 Nat8f3-201ENSMUST00000050780 1821 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Ifna1P01572 Slc35e2-201ENSMUST00000043829 2910 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Ifna1P01572 Alx1-204ENSMUST00000217946 1542 ntTSL 5 BASIC12.96□□□□□ -0.33
Ifna1P01572 Scyl1-201ENSMUST00000025890 2637 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Ifna1P01572 Txndc11-202ENSMUST00000118362 4248 ntTSL 1 (best) BASIC12.96□□□□□ -0.34
Ifna1P01572 Psen2-204ENSMUST00000111106 2020 ntAPPRIS P2 TSL 5 BASIC12.96□□□□□ -0.34
Ifna1P01572 Hectd1-202ENSMUST00000179265 9012 ntTSL 5 BASIC12.96□□□□□ -0.34
Ifna1P01572 Cobll1-201ENSMUST00000090896 4867 ntAPPRIS ALT2 TSL 1 (best) BASIC12.96□□□□□ -0.34
Ifna1P01572 H2-DMb1-201ENSMUST00000114232 1404 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
Ifna1P01572 Flrt2-202ENSMUST00000110117 3223 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
Ifna1P01572 Gm5357-201ENSMUST00000212720 1924 ntBASIC12.96□□□□□ -0.34
Ifna1P01572 Ushbp1-201ENSMUST00000049184 2438 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
Ifna1P01572 Cep63-201ENSMUST00000093791 2696 ntTSL 1 (best) BASIC12.96□□□□□ -0.34
Ifna1P01572 Rbm7-202ENSMUST00000213276 2629 ntTSL 2 BASIC12.95□□□□□ -0.34
Ifna1P01572 Erp29-203ENSMUST00000130451 5204 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Ifna1P01572 Elac1-201ENSMUST00000041138 4971 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Ifna1P01572 Nagk-203ENSMUST00000113851 1323 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
Ifna1P01572 Synrg-201ENSMUST00000049714 3995 ntAPPRIS ALT2 TSL 5 BASIC12.95□□□□□ -0.34
Ifna1P01572 Klhl26-202ENSMUST00000166976 2734 ntTSL 2 BASIC12.95□□□□□ -0.34
Ifna1P01572 Prkcz2-201ENSMUST00000206136 1756 ntBASIC12.95□□□□□ -0.34
Ifna1P01572 Smyd5-201ENSMUST00000045693 2486 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Ifna1P01572 Arhgef1-218ENSMUST00000206508 3195 ntAPPRIS ALT2 TSL 1 (best) BASIC12.95□□□□□ -0.34
Ifna1P01572 Cr1l-208ENSMUST00000194111 1501 ntAPPRIS ALT2 TSL 1 (best) BASIC12.95□□□□□ -0.34
Ifna1P01572 Col8a2-201ENSMUST00000070132 4332 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Ifna1P01572 Rab3d-202ENSMUST00000119055 694 ntTSL 3 BASIC12.95□□□□□ -0.34
Ifna1P01572 Asnsd1-202ENSMUST00000123519 983 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
Ifna1P01572 Gm22697-201ENSMUST00000175194 63 ntBASIC12.95□□□□□ -0.34
Ifna1P01572 AC127302.2-201ENSMUST00000215212 268 ntBASIC12.95□□□□□ -0.34
Ifna1P01572 Myl6-206ENSMUST00000218127 691 ntAPPRIS ALT1 TSL 2 BASIC12.95□□□□□ -0.34
Ifna1P01572 Bcl2l12-201ENSMUST00000003290 1075 ntAPPRIS P2 TSL 1 (best) BASIC12.95□□□□□ -0.34
Ifna1P01572 Gm9987-201ENSMUST00000069768 567 ntBASIC12.95□□□□□ -0.34
Ifna1P01572 Olfr601-201ENSMUST00000080474 990 ntAPPRIS P1 BASIC12.95□□□□□ -0.34
Ifna1P01572 Mrpl43-201ENSMUST00000097715 1213 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Ifna1P01572 C530025M09Rik-201ENSMUST00000099264 690 ntAPPRIS P1 BASIC12.95□□□□□ -0.34
Ifna1P01572 Atf4-201ENSMUST00000109605 1724 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Ifna1P01572 Zfr2-201ENSMUST00000117798 3349 ntAPPRIS P1 TSL 5 BASIC12.95□□□□□ -0.34
Ifna1P01572 Vldlr-202ENSMUST00000047645 3260 ntTSL 5 BASIC12.95□□□□□ -0.34
Ifna1P01572 Klhl9-201ENSMUST00000094993 4174 ntAPPRIS P1 BASIC12.95□□□□□ -0.34
Ifna1P01572 Diaph2-207ENSMUST00000167619 8439 ntAPPRIS ALT2 TSL 5 BASIC12.95□□□□□ -0.34
Ifna1P01572 Papd7-204ENSMUST00000223344 2118 ntAPPRIS P2 TSL 3 BASIC12.95□□□□□ -0.34
Ifna1P01572 Rpp25-201ENSMUST00000080514 1423 ntAPPRIS P1 BASIC12.95□□□□□ -0.34
Ifna1P01572 Hacd4-201ENSMUST00000030221 2089 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Ifna1P01572 Ccbe1-202ENSMUST00000130300 1631 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Ifna1P01572 Arf3-201ENSMUST00000053183 3579 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Ifna1P01572 Hmbs-201ENSMUST00000077353 1605 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Ifna1P01572 Ddx20-201ENSMUST00000090680 2905 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Ifna1P01572 Pdpk1-201ENSMUST00000052462 1832 ntAPPRIS ALT2 TSL 1 (best) BASIC12.95□□□□□ -0.34
Ifna1P01572 Trp53i11-201ENSMUST00000090554 2654 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Ifna1P01572 Rnf121-202ENSMUST00000096639 2249 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Ifna1P01572 Cyp4f37-201ENSMUST00000077639 2642 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Ifna1P01572 Psmd4-203ENSMUST00000117355 1756 ntAPPRIS ALT2 TSL 1 (best) BASIC12.94□□□□□ -0.34
Ifna1P01572 Tor1aip1-201ENSMUST00000027738 1952 ntAPPRIS P3 TSL 1 (best) BASIC12.94□□□□□ -0.34
Ifna1P01572 Plxna1-202ENSMUST00000163139 9034 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Ifna1P01572 Clip2-201ENSMUST00000036999 4893 ntAPPRIS ALT2 TSL 1 (best) BASIC12.94□□□□□ -0.34
Ifna1P01572 Camsap2-202ENSMUST00000192001 6329 ntAPPRIS ALT2 TSL 1 (best) BASIC12.94□□□□□ -0.34
Ifna1P01572 Grik4-202ENSMUST00000114865 5887 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Ifna1P01572 Atp2a3-207ENSMUST00000163326 4606 ntAPPRIS ALT2 TSL 5 BASIC12.94□□□□□ -0.34
Ifna1P01572 Sox21-201ENSMUST00000170662 3799 ntAPPRIS P1 BASIC12.94□□□□□ -0.34
Ifna1P01572 Agap1-201ENSMUST00000027521 11921 ntAPPRIS P4 TSL 1 (best) BASIC12.94□□□□□ -0.34
Ifna1P01572 Hes6-201ENSMUST00000086851 1335 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Ifna1P01572 Grin3a-201ENSMUST00000076674 7431 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Ifna1P01572 Rbm42-202ENSMUST00000108141 1526 ntAPPRIS ALT2 TSL 5 BASIC12.94□□□□□ -0.34
Ifna1P01572 Pak1ip1-201ENSMUST00000046951 1722 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Ifna1P01572 Dbn1-203ENSMUST00000109923 2940 ntAPPRIS P3 TSL 1 (best) BASIC12.94□□□□□ -0.34
Ifna1P01572 Ctdp1-201ENSMUST00000036229 3713 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Ifna1P01572 Cnst-201ENSMUST00000040706 4709 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Ifna1P01572 Nov-201ENSMUST00000050027 2869 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Ifna1P01572 Scube1-205ENSMUST00000171496 7824 ntAPPRIS P3 TSL 5 BASIC12.94□□□□□ -0.34
Ifna1P01572 Tmem161a-214ENSMUST00000182980 2080 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
Ifna1P01572 Ntng2-210ENSMUST00000177689 1679 ntAPPRIS ALT2 TSL 5 BASIC12.94□□□□□ -0.34
Ifna1P01572 Mthfsl-201ENSMUST00000113110 801 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Ifna1P01572 Mthfs-203ENSMUST00000118870 705 ntTSL 3 BASIC12.94□□□□□ -0.34
Ifna1P01572 Gm11860-201ENSMUST00000122346 1010 ntBASIC12.94□□□□□ -0.34
Ifna1P01572 Gm13420-201ENSMUST00000129574 1091 ntAPPRIS P1 TSL 5 BASIC12.94□□□□□ -0.34
Ifna1P01572 Gm11973-203ENSMUST00000155498 867 ntTSL 3 BASIC12.94□□□□□ -0.34
Ifna1P01572 Has3-202ENSMUST00000175987 1154 ntTSL 5 BASIC12.94□□□□□ -0.34
Ifna1P01572 Mrpl36-203ENSMUST00000222030 680 ntAPPRIS P1 TSL 3 BASIC12.94□□□□□ -0.34
Ifna1P01572 3830406C13Rik-207ENSMUST00000223927 1010 ntBASIC12.94□□□□□ -0.34
Ifna1P01572 Mthfs-201ENSMUST00000085256 816 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Ifna1P01572 Kpnb1-201ENSMUST00000001479 5894 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Ifna1P01572 Rad23a-202ENSMUST00000109761 1842 ntAPPRIS ALT1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Ifna1P01572 Mob4-202ENSMUST00000159311 1816 ntTSL 3 BASIC12.94□□□□□ -0.34
Ifna1P01572 Gm26669-201ENSMUST00000181323 1808 ntTSL 5 BASIC12.94□□□□□ -0.34
Ifna1P01572 Zbtb20-202ENSMUST00000114690 2759 ntAPPRIS ALT1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Ifna1P01572 Sh2b3-204ENSMUST00000122426 2777 ntAPPRIS P3 TSL 1 (best) BASIC12.94□□□□□ -0.34
Ifna1P01572 Arid3a-202ENSMUST00000105376 4892 ntAPPRIS P3 TSL 1 (best) BASIC12.94□□□□□ -0.34
Ifna1P01572 Fam76b-201ENSMUST00000059579 3702 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Ifna1P01572 Hars-201ENSMUST00000001416 1987 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Ifna1P01572 Las1l-201ENSMUST00000079987 2530 ntAPPRIS P2 TSL 1 (best) BASIC12.94□□□□□ -0.34
Ifna1P01572 G630022F23Rik-201ENSMUST00000202923 3627 ntBASIC12.94□□□□□ -0.34
Ifna1P01572 Sntb2-203ENSMUST00000212524 9945 ntAPPRIS P2 TSL 1 (best) BASIC12.94□□□□□ -0.34
Ifna1P01572 Ren1-201ENSMUST00000094556 1592 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Retrieved 100 of 76,532 protein–RNA pairs in 28.3 ms