Protein–RNA interactions for Protein: O89116

Vti1a, Vesicle transport through interaction with t-SNAREs homolog 1A, mousemouse

Predictions only

Length 217 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vti1aO89116 Slc8b1-202ENSMUST00000076051 2661 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
Vti1aO89116 Mrps27-201ENSMUST00000052249 1849 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Vti1aO89116 Bnc1-201ENSMUST00000026096 4646 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Vti1aO89116 Pkp2-202ENSMUST00000161342 2931 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
Vti1aO89116 Tnfaip2-202ENSMUST00000109792 3284 ntAPPRIS ALT2 TSL 1 (best) BASIC16.54■□□□□ 0.24
Vti1aO89116 Dcaf17-202ENSMUST00000102701 1703 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
Vti1aO89116 Gm12355-201ENSMUST00000104933 1311 ntAPPRIS P1 BASIC16.54■□□□□ 0.24
Vti1aO89116 Trappc11-202ENSMUST00000120987 2060 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
Vti1aO89116 Anks1b-214ENSMUST00000182356 7561 ntTSL 5 BASIC16.54■□□□□ 0.24
Vti1aO89116 Pcp2-204ENSMUST00000136105 504 ntAPPRIS P4 TSL 1 (best) BASIC16.54■□□□□ 0.24
Vti1aO89116 Ndufa1-201ENSMUST00000016571 419 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Vti1aO89116 Higd1a-206ENSMUST00000215300 605 ntAPPRIS P1 TSL 3 BASIC16.54■□□□□ 0.24
Vti1aO89116 Meaf6-201ENSMUST00000055213 872 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
Vti1aO89116 Faf1-201ENSMUST00000102724 4468 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Vti1aO89116 Pex5l-206ENSMUST00000108226 2632 ntAPPRIS ALT2 TSL 1 (best) BASIC16.54■□□□□ 0.24
Vti1aO89116 Arhgef10l-203ENSMUST00000097820 4382 ntAPPRIS ALT2 TSL 1 (best) BASIC16.54■□□□□ 0.24
Vti1aO89116 Ccdc166-201ENSMUST00000182172 2584 ntBASIC16.54■□□□□ 0.24
Vti1aO89116 Ftsj1-202ENSMUST00000115594 1529 ntTSL 5 BASIC16.54■□□□□ 0.24
Vti1aO89116 Krt90-201ENSMUST00000023714 2534 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Vti1aO89116 Prr23a3-201ENSMUST00000167951 1817 ntAPPRIS P1 BASIC16.54■□□□□ 0.24
Vti1aO89116 Rftn1-201ENSMUST00000044503 4029 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Vti1aO89116 Wscd2-201ENSMUST00000094452 4302 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Vti1aO89116 Lypd1-201ENSMUST00000027582 1447 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
Vti1aO89116 Neu4-202ENSMUST00000190212 1719 ntAPPRIS ALT2 TSL 1 (best) BASIC16.53■□□□□ 0.24
Vti1aO89116 Mapk14-204ENSMUST00000114754 3592 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
Vti1aO89116 Syf2-201ENSMUST00000030622 1369 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Vti1aO89116 Nphp1-201ENSMUST00000028857 2260 ntAPPRIS P3 TSL 1 (best) BASIC16.53■□□□□ 0.24
Vti1aO89116 B230219D22Rik-201ENSMUST00000057844 4652 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Vti1aO89116 Slc4a5-202ENSMUST00000113899 5039 ntAPPRIS ALT2 TSL 5 BASIC16.53■□□□□ 0.24
Vti1aO89116 Fgf9-201ENSMUST00000022545 1593 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Vti1aO89116 Acyp1-203ENSMUST00000117138 735 ntAPPRIS P1 TSL 2 BASIC16.53■□□□□ 0.24
Vti1aO89116 Gm15706-201ENSMUST00000139612 899 ntTSL 2 BASIC16.53■□□□□ 0.24
Vti1aO89116 Timm9-202ENSMUST00000166120 990 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Vti1aO89116 Ffar2-203ENSMUST00000168528 1210 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Vti1aO89116 A430093F15Rik-205ENSMUST00000188480 509 ntTSL 3 BASIC16.53■□□□□ 0.24
Vti1aO89116 Gm44596-201ENSMUST00000204223 647 ntAPPRIS P1 TSL 5 BASIC16.53■□□□□ 0.24
Vti1aO89116 Msantd1-204ENSMUST00000212362 798 ntAPPRIS ALT2 TSL 5 BASIC16.53■□□□□ 0.24
Vti1aO89116 Gm20337-201ENSMUST00000219062 1118 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
Vti1aO89116 Timm9-207ENSMUST00000221559 718 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Vti1aO89116 Timm9-209ENSMUST00000221815 1193 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
Vti1aO89116 AC151836.1-202ENSMUST00000226259 753 ntBASIC16.53■□□□□ 0.24
Vti1aO89116 Mt3-201ENSMUST00000034211 536 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Vti1aO89116 Timm10b-201ENSMUST00000058333 694 ntAPPRIS P2 TSL 1 (best) BASIC16.53■□□□□ 0.24
Vti1aO89116 Gm15500-202ENSMUST00000071641 1019 ntBASIC16.53■□□□□ 0.24
Vti1aO89116 Sdhc-201ENSMUST00000081560 815 ntTSL 3 BASIC16.53■□□□□ 0.24
Vti1aO89116 Hist1h3c-201ENSMUST00000091752 630 ntAPPRIS P1 BASIC16.53■□□□□ 0.24
Vti1aO89116 Fubp1-205ENSMUST00000196695 2374 ntAPPRIS ALT2 TSL 1 (best) BASIC16.53■□□□□ 0.24
Vti1aO89116 Mid1-206ENSMUST00000112107 3194 ntTSL 5 BASIC16.53■□□□□ 0.24
Vti1aO89116 Zfp668-201ENSMUST00000054415 5768 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Vti1aO89116 Edem2-201ENSMUST00000040833 2290 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Vti1aO89116 Zfp384-207ENSMUST00000112427 3072 ntAPPRIS P2 TSL 5 BASIC16.53■□□□□ 0.24
Vti1aO89116 Chst14-202ENSMUST00000110837 1991 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
Vti1aO89116 Slc22a1-201ENSMUST00000024596 1994 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Vti1aO89116 Mindy4-203ENSMUST00000204842 2211 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
Vti1aO89116 Coro6-201ENSMUST00000021190 1418 ntAPPRIS P5 TSL 1 (best) BASIC16.53■□□□□ 0.24
Vti1aO89116 Ube2d2b-201ENSMUST00000072578 1678 ntAPPRIS P1 BASIC16.53■□□□□ 0.24
Vti1aO89116 Gm16011-201ENSMUST00000121567 2662 ntBASIC16.53■□□□□ 0.24
Vti1aO89116 Wdr91-201ENSMUST00000081214 2682 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Vti1aO89116 Aanat-205ENSMUST00000153476 1353 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Vti1aO89116 Crybg1-201ENSMUST00000020017 6608 ntAPPRIS P2 TSL 5 BASIC16.52■□□□□ 0.24
Vti1aO89116 Phykpl-201ENSMUST00000020625 1609 ntAPPRIS ALT2 TSL 1 (best) BASIC16.52■□□□□ 0.24
Vti1aO89116 AC163637.1-201ENSMUST00000215491 1894 ntBASIC16.52■□□□□ 0.24
Vti1aO89116 Npr3-201ENSMUST00000066529 6892 ntAPPRIS P2 TSL 1 (best) BASIC16.52■□□□□ 0.24
Vti1aO89116 Dot1l-201ENSMUST00000105336 6808 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Vti1aO89116 Ahctf1-201ENSMUST00000027768 8506 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Vti1aO89116 T-201ENSMUST00000074667 2046 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Vti1aO89116 Pcdha3-201ENSMUST00000192503 5332 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Vti1aO89116 Dhdds-203ENSMUST00000105886 1015 ntTSL 5 BASIC16.52■□□□□ 0.24
Vti1aO89116 Siva1-202ENSMUST00000109755 333 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
Vti1aO89116 2010010A06Rik-203ENSMUST00000190465 650 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
Vti1aO89116 Gm19164-201ENSMUST00000210667 640 ntBASIC16.52■□□□□ 0.24
Vti1aO89116 Lrch1-205ENSMUST00000228252 3125 ntAPPRIS ALT2 BASIC16.52■□□□□ 0.24
Vti1aO89116 Idh2-201ENSMUST00000107384 1745 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Vti1aO89116 Ccdc43-201ENSMUST00000092569 2366 ntAPPRIS P2 TSL 1 (best) BASIC16.52■□□□□ 0.23
Vti1aO89116 Gmppa-202ENSMUST00000113584 1692 ntAPPRIS P1 TSL 5 BASIC16.52■□□□□ 0.23
Vti1aO89116 Dmrtb1-201ENSMUST00000069271 1861 ntAPPRIS P1 TSL 5 BASIC16.52■□□□□ 0.23
Vti1aO89116 Ddx50-201ENSMUST00000020270 2535 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
Vti1aO89116 Irf3-202ENSMUST00000107834 1429 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
Vti1aO89116 Smpd4-221ENSMUST00000170996 1619 ntTSL 5 BASIC16.52■□□□□ 0.23
Vti1aO89116 Zswim4-201ENSMUST00000039480 4625 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
Vti1aO89116 Lancl1-203ENSMUST00000119559 1385 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Vti1aO89116 Rffl-202ENSMUST00000071152 3633 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
Vti1aO89116 Cd151-203ENSMUST00000177840 1708 ntAPPRIS P1 TSL 5 BASIC16.51■□□□□ 0.23
Vti1aO89116 Asphd1-202ENSMUST00000106339 518 ntAPPRIS P3 TSL 1 (best) BASIC16.51■□□□□ 0.23
Vti1aO89116 Gm45799-202ENSMUST00000106786 409 ntAPPRIS ALT2 TSL 3 BASIC16.51■□□□□ 0.23
Vti1aO89116 Taf3-202ENSMUST00000114906 583 ntTSL 2 BASIC16.51■□□□□ 0.23
Vti1aO89116 Ms4a6d-202ENSMUST00000125291 679 ntTSL 3 BASIC16.51■□□□□ 0.23
Vti1aO89116 Slc38a6-204ENSMUST00000126488 589 ntTSL 5 BASIC16.51■□□□□ 0.23
Vti1aO89116 Gm13403-202ENSMUST00000134271 674 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
Vti1aO89116 Gm13431-203ENSMUST00000147012 388 ntTSL 2 BASIC16.51■□□□□ 0.23
Vti1aO89116 Gm44945-201ENSMUST00000206764 1187 ntBASIC16.51■□□□□ 0.23
Vti1aO89116 Gsdmcl1-201ENSMUST00000071847 1133 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
Vti1aO89116 Cdkn2d-201ENSMUST00000086374 1264 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
Vti1aO89116 H2-K1-202ENSMUST00000087189 579 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
Vti1aO89116 Trmt2a-202ENSMUST00000100099 2235 ntAPPRIS P5 TSL 1 (best) BASIC16.51■□□□□ 0.23
Vti1aO89116 Anks6-201ENSMUST00000084616 3552 ntAPPRIS P1 TSL 5 BASIC16.51■□□□□ 0.23
Vti1aO89116 Pitpnm1-202ENSMUST00000100022 4512 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Vti1aO89116 Itgav-202ENSMUST00000111740 6788 ntAPPRIS ALT2 TSL 5 BASIC16.51■□□□□ 0.23
Vti1aO89116 Glb1-201ENSMUST00000063042 2396 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Vti1aO89116 Pcdha7-201ENSMUST00000192631 5337 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Retrieved 100 of 76,532 protein–RNA pairs in 24.4 ms